Details for gene set HCC_SURVIVAL_GOOD_VS_POOR

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_wtNotch.phenotype_truncNotch_versus_wtNotch.cls #truncNotch_versus_wtNotch
Phenotype	phenotype_truncNotch_versus_wtNotch.cls#truncNotch_versus_wtNotch
Upregulated in class	truncNotch
GeneSet	HCC_SURVIVAL_GOOD_VS_POOR_UP
Enrichment Score (ES)	0.6504661
Normalized Enrichment Score (NES)	1.8316383
Nominal p-value	0.0
FDR q-value	0.013921606
FWER p-Value	0.016

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	C2	5390465	126	2.930	0.0420	Yes
2	ACADS	110746	127	2.930	0.0908	Yes
3	DCXR	4730551	185	2.757	0.1337	Yes
4	KHK	1090204 3870204	370	2.330	0.1626	Yes
5	EGLN2	540086	497	2.139	0.1914	Yes
6	PCCB	50670	565	2.056	0.2221	Yes
7	EPHX1	1740136	640	1.976	0.2510	Yes
8	ABHD6	630717	643	1.974	0.2838	Yes
9	CRYL1	1340427	675	1.935	0.3143	Yes
10	SLC25A10	1400609	691	1.919	0.3455	Yes
11	CPT2	3940504 6180075	805	1.808	0.3695	Yes
12	MAP4K1	4060692	810	1.804	0.3994	Yes
13	NDUFS2	4850020 6200402	837	1.771	0.4275	Yes
14	SERPING1	5550440	842	1.761	0.4566	Yes
15	ALDH4A1	2450450	902	1.712	0.4819	Yes
16	PINK1	380044 580577	930	1.691	0.5087	Yes
17	SERPINF1	7040367	994	1.624	0.5323	Yes
18	ENPP5	1780338	1251	1.435	0.5424	Yes
19	NDRG2	450403	1396	1.340	0.5570	Yes
20	ECHS1	2970184	1413	1.330	0.5783	Yes
21	SLC35D1	1740520	1509	1.261	0.5941	Yes
22	C1QTNF4	60619	1864	1.045	0.5924	Yes
23	SELENBP1	3850575	1869	1.041	0.6096	Yes
24	ACOX2	450017	2040	0.977	0.6166	Yes
25	PCYT2	2630092 4590278	2048	0.974	0.6325	Yes
26	MVK	1450717	2171	0.913	0.6411	Yes
27	MASP2	360110	2313	0.848	0.6476	Yes
28	G6PC	430093	2610	0.716	0.6435	Yes
29	IVD	2510673	2692	0.678	0.6505	Yes
30	PPAP2A	1170397 3440288 3930270	3167	0.503	0.6332	No
31	INSR	1190504	3522	0.412	0.6210	No
32	HAGH	540358	3532	0.410	0.6273	No
33	F12	1090215 3520736	3706	0.372	0.6242	No
34	SLC38A3	5340142	3843	0.346	0.6226	No
35	CRAT	540020 2060364 3520148	4040	0.314	0.6172	No
36	GLYAT	6200239	4068	0.308	0.6209	No
37	INSIG1	1500332 3450458 4540301	4153	0.292	0.6212	No
38	AMT	3180450	4216	0.282	0.6226	No
39	RDH5	2970736 3940632 5340730 6370093 4610059	4833	0.209	0.5928	No
40	VPREB1	3520280	4891	0.202	0.5931	No
41	CPN2	6590291	4975	0.194	0.5918	No
42	MSRA	4570411	5182	0.175	0.5836	No
43	GJB1	1240441	5422	0.156	0.5733	No
44	PRDX6	4920397 6380601	5616	0.142	0.5652	No
45	SERPIND1	6110059	5784	0.132	0.5584	No
46	ABCG8	4780605	5969	0.121	0.5504	No
47	SGPL1	4480059	6005	0.119	0.5505	No
48	ABCC2	380202 5390300	6084	0.115	0.5482	No
49	RGN	6200095	6341	0.102	0.5361	No
50	ZP3	4060767	6815	0.083	0.5119	No
51	CPB2	4150167 6100333 6590735	6924	0.079	0.5074	No
52	AQP9	2650047	7058	0.075	0.5014	No
53	ABCA6	130538 1050706	7198	0.070	0.4951	No
54	KLK3	1500278	7344	0.066	0.4884	No
55	MUCDHL	5720056	7398	0.064	0.4866	No
56	F13B	6220278	7777	0.055	0.4671	No
57	DPYS	3130670	7975	0.050	0.4573	No
58	OTC	1740494	8254	0.043	0.4430	No
59	HAO1	7050093	8316	0.042	0.4404	No
60	MPDZ	130026 1990064 4050577	8596	0.037	0.4259	No
61	LPIN1	1770358 3120059	8673	0.035	0.4224	No
62	AMACR	780215	8724	0.034	0.4202	No
63	CDO1	2480279	8826	0.032	0.4153	No
64	UGT1A6	4610368 6900086 4540092 2630075	8874	0.031	0.4133	No
65	APCS	2060500	8966	0.029	0.4088	No
66	SERPINC1	1780717	9110	0.027	0.4016	No
67	APOC3	2030168	9301	0.024	0.3917	No
68	CES2	5340609	9390	0.022	0.3873	No
69	SLC6A12	3170685	9664	0.018	0.3728	No
70	RHBG	2810736	9675	0.017	0.3726	No
71	NF1	6980433	9703	0.017	0.3714	No
72	AOX1	110082 6290450	9714	0.016	0.3711	No
73	FMO3	2480369	9887	0.014	0.3621	No
74	TTPA	630576	9951	0.013	0.3589	No
75	ANXA9	1190195	9995	0.012	0.3568	No
76	PKLR	1170400 2470114	10067	0.011	0.3531	No
77	TTBK1	60605 1850722	10136	0.009	0.3496	No
78	ITIH1	670044	10488	0.004	0.3307	No
79	CUTL2	2940692 6220687	10490	0.004	0.3307	No
80	PCK1	7000358	10495	0.004	0.3305	No
81	APOA5	6130471	10717	0.000	0.3186	No
82	PAH	3800309	10759	-0.001	0.3164	No
83	PIPOX	70750	10810	-0.002	0.3137	No
84	ABCG5	2810670	11034	-0.005	0.3017	No
85	SULT2A1	2650286	11067	-0.006	0.3001	No
86	BAAT	730739	11098	-0.006	0.2986	No
87	MST1	1400403	11192	-0.008	0.2937	No
88	SALL1	5420020 7050195	11661	-0.016	0.2687	No
89	HYAL1	3850341	12050	-0.024	0.2481	No
90	CABIN1	6900446	12177	-0.027	0.2417	No
91	HPD	3120519	12293	-0.029	0.2360	No
92	CES1	1400494	12418	-0.032	0.2298	No
93	SLC2A2	5130537 5720722 6770079	12450	-0.033	0.2287	No
94	MYRIP	1580471	12483	-0.033	0.2275	No
95	CES3	5050167 3290458	12501	-0.034	0.2272	No
96	ASGR1	1850088	12525	-0.034	0.2265	No
97	MTSS1	780435 2370114	12568	-0.035	0.2248	No
98	DIO1	4570279 5290112 5420148	13390	-0.063	0.1815	No
99	HGD	460390	13411	-0.064	0.1815	No
100	WNT11	1230278	13658	-0.075	0.1694	No
101	SLC27A5	2850717	14813	-0.173	0.1100	No
102	F10	3830450	15052	-0.209	0.1006	No
103	EHHADH	6200315	15236	-0.250	0.0949	No
104	SPINK2	3990093	15414	-0.287	0.0901	No
105	IL6R	520706 3800215	15534	-0.318	0.0890	No
106	AR	6380167	15557	-0.323	0.0931	No
107	ITPR2	5360128	15879	-0.428	0.0829	No
108	ALAS1	6400440	16367	-0.602	0.0666	No
109	MRPL46	360736	16368	-0.602	0.0767	No
110	STARD10	1400619 4570170	16433	-0.632	0.0837	No
111	SEC14L2	2640370	16453	-0.638	0.0933	No
112	AMFR	2810041	16555	-0.687	0.0993	No
113	SRD5A1	5910347	16605	-0.720	0.1087	No