DatasetSet_03_truncNotch_versus_wtNotch.phenotype_truncNotch_versus_wtNotch.cls
#truncNotch_versus_wtNotch
Phenotypephenotype_truncNotch_versus_wtNotch.cls#truncNotch_versus_wtNotch
Upregulated in classwtNotch
GeneSetFLECHNER_KIDNEY_TRANSPLANT_WELL_UP
Enrichment Score (ES)-0.514269
Normalized Enrichment Score (NES)-1.7373134
Nominal p-value0.0
FDR q-value0.04766776
FWER p-Value0.486
Table: GSEA Results Summary



Fig 1: Enrichment plot: FLECHNER_KIDNEY_TRANSPLANT_WELL_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1SFRS250707 3805931592.8280.0008No
2CLU54200752112.6670.0069No
3ARF635200263552.3620.0070No
4MRPS68701643652.3390.0144No
5KHK1090204 38702043702.3300.0220No
6SLC25A140504023942.2820.0284No
7VTI1B3140364 65104974712.1690.0315No
8GOT129404654982.1380.0372No
9MVP40102535102.1250.0438No
10HSPE131704385262.1060.0500No
11HERPUD171004406062.0160.0524No
12MRPS18B55700866891.9220.0544No
13EEF1D2320524 25103417191.8880.0591No
14PPM1B380180 450154 36102157891.8230.0615No
15COMT360687 510577 57000928571.7470.0636No
16RBPMS39904949001.7130.0671No
17SRRM161100259481.6740.0701No
18TAPBP198011010461.5800.0701No
19IGFBP42680309 542044111421.5060.0699No
20DSCR14540048 622003911431.5050.0750No
21SEPT61740739 522040212051.4690.0766No
22DDOST268073112631.4260.0782No
23ARMCX2232016714311.3230.0735No
24SCP2520092 1570692 2570066 620053714921.2710.0745No
25ZMYND11630181 2570019 4850138 536004015191.2580.0773No
26BCAP31119052015361.2480.0806No
27PLSCR1265030115671.2310.0831No
28TOMM34569010216151.1980.0845No
29PARK7456019516231.1890.0881No
30HNRPA2B11240619 6200161 6200494 698040816671.1630.0897No
31GNB2L1590052016701.1620.0934No
32MYH93120091 485029216861.1540.0965No
33GTF3A234045117281.1290.0980No
34SELENBP1385057518691.0410.0938No
35TBCA640009519131.0220.0949No
36CD9473004119561.0050.0960No
37RHOA580142 5900131 534045019790.9980.0981No
38IMMT870450 428043820050.9930.1001No
39PPP2R1A206027920210.9880.1026No
40RYK1500338 177007220630.9670.1036No
41HNRPDL1050102 1090181 536047121000.9460.1048No
42LITAF694067121320.9320.1062No
43TARDBP870390 235009321640.9170.1076No
44VCAM1290045023050.8520.1027No
45QDPR61001723630.8270.1024No
46IGF1R336049423670.8250.1050No
47RAB7L143045024930.7680.1007No
48COL4A1174057525190.7560.1019No
49DEK1050451 456003726000.7220.0999No
50ADD34150739 539060027210.6630.0955No
51VAT1105004027280.6610.0974No
52UQCRC152005328200.6270.0945No
53ADH1A317042729010.6000.0921No
54HPGD677019229020.5990.0942No
55SWAP702810577 2850739 513059429170.5930.0954No
56SERPINE2281039029240.5910.0970No
57PARP14780446 640033831720.5010.0852No
58PRKRA251060032250.4870.0839No
59USP14730377 405033334130.4360.0751No
60SHOC21340064 157054634550.4260.0743No
61EPS15420021535370.4100.0712No
62ADH56290100 638071135940.3970.0695No
63TXNL4A4120286 651024236240.3910.0692No
64RAB8A3610594 602073637380.3650.0642No
65COL3A16420273 662004437480.3630.0649No
66CNIH2190484 508060937820.3550.0643No
67COL1A238036440100.3190.0529No
68H2AFV2030577 522012940890.3050.0497No
69MEGF9232009743180.2690.0380No
70FYN2100468 4760520 485068743890.2600.0351No
71CXCL9157067344380.2530.0333No
72ANXA4140031545580.2370.0275No
73VIM2043145770.2350.0273No
74HADH1690341 383046545870.2350.0276No
75PKN2940746 235016846190.2320.0267No
76TFPI1400288 555000847300.2180.0214No
77CITED25670114 513008847840.2130.0192No
78PPP2R5C3310121 665067247980.2120.0192No
79NNT540253 1170471 5550092 676039748220.2090.0186No
80TSC22D11340739 604018148240.2090.0193No
81HSPA82120315 1050132 655074648410.2080.0191No
82EIF3S2380711 870433 245061949540.1950.0136No
83RPL36AL539002550500.1870.0090No
84MTMR4454052450560.1860.0094No
85AHR456067150700.1850.0093No
86GALNT14070487 6130100 6250132 690004851230.1800.0070No
87CDS1345039751380.1790.0068No
88SMURF2194016152110.1720.0035No
89ZMPSTE241090112 2030593 3780129 459004454460.154-0.0089No
90ARID5B11040354960.151-0.0111No
91ACTG154021555010.151-0.0108No
92LRP21400204 329070655120.150-0.0108No
93UBE2N520369 290004755830.144-0.0142No
94FHL16027856300.141-0.0162No
95EIF3S5655028056330.141-0.0159No
96DST430026 1090035 2340577 3170068 3870112 4780519 6400167 6450358 704034757490.133-0.0217No
97BMP2K60541 557050457530.133-0.0215No
98ABAT1940520 2690021 569016757710.132-0.0220No
99TUSC3169041157750.132-0.0217No
100CD2AP194036958120.130-0.0232No
101CD443990072 4850671 5860411 6860148 705055158570.127-0.0252No
102CYB5R3430097 686040059560.121-0.0302No
103CREB3L2339048460040.119-0.0324No
104KNG16400576 677034760300.118-0.0333No
105GULP12230725 2350039 557044661200.113-0.0379No
106DPYSL22100427 3130112 570032461410.112-0.0386No
107TNPO1730092 226073562290.107-0.0430No
108MYO1B77037264640.097-0.0555No
109SDCBP460487 2190039 527044164850.096-0.0563No
110DNAJA11660010 2320358 684013665650.092-0.0603No
111NUP501240519 2640390 2650471 473013366250.090-0.0633No
112RHOBTB3401068766540.089-0.0645No
113HDGF5130114 5420066 659015266770.088-0.0654No
114ERBB3589037267040.087-0.0666No
115LRRFIP1870259 1050204 276037768030.083-0.0717No
116SPARCL1199034868060.083-0.0715No
117PHKB2060735 423048770480.075-0.0845No
118PLOD2336042770810.074-0.0860No
119SFRP1698031571110.073-0.0874No
120PSMB9698047171560.072-0.0895No
121PTPN122030309 6020725 6130746 629060971890.071-0.0911No
122PAFAH1B14230333 6420121 645006672190.070-0.0924No
123IFI16652060172330.069-0.0929No
124ABP11980609 6005673130.067-0.0970No
125UGT8371012873480.066-0.0987No
126TNFRSF11B461044674070.064-0.1016No
127TNFSF10317030074650.062-0.1045No
128TANK1090020 2060458 237040075400.061-0.1084No
129DSTN314059275450.061-0.1084No
130ACSM36220170 2650706 590002075530.060-0.1086No
131UBXD2428009275610.060-0.1088No
132C1D421009275840.060-0.1098No
133CDH111230133 2100180 461011076130.059-0.1111No
134ANK2651054676370.058-0.1122No
135BRD81170463 2900075 4050397 659033277740.055-0.1195No
136TXNDC9158007978400.053-0.1229No
137KCNJ1570176 690075078600.053-0.1238No
138SLC22A2567052079160.051-0.1266No
139GBP178007579620.050-0.1289No
140NRIP1319003980670.048-0.1345No
141PSMA35900047 704016181760.045-0.1402No
142LEPR1340398 319032482650.043-0.1449No
143BNIP3314027082930.043-0.1463No
144PRKCI542013983760.041-0.1506No
145CNBP257016184610.039-0.1551No
146HNRPR2320440 2900601 461000885720.037-0.1610No
147GSN383016886220.036-0.1636No
148WDFY33610041 4560333 457027386430.036-0.1646No
149NACA520326 589067386970.035-0.1674No
150CDC42BPA84067188650.031-0.1765No
151FGL2317073189050.030-0.1785No
152EPS8705020490570.028-0.1867No
153UBQLN2430397 1170594 407012191180.027-0.1899No
154TRIM2430546 117028691340.027-0.1907No
155RFK105007091790.026-0.1930No
156NDUFS1265025394240.022-0.2063No
157CRYM394052894290.021-0.2065No
158ACSL3314019594650.021-0.2083No
159LUM542007994750.021-0.2087No
160EVI2B105046596250.018-0.2169No
161SLC34A143004496420.018-0.2177No
162ANXA7611044696490.018-0.2180No
163TM9SF1276033396890.017-0.2200No
164F2RL1329027998240.015-0.2274No
165GRB10698008298330.015-0.2277No
166FMO3248036998870.014-0.2306No
167IGJ117054198950.014-0.2310No
168GBE1219036898970.014-0.2310No
169PGK11570494 63030099280.013-0.2326No
170FABP4505011499330.013-0.2327No
171DYNLL1557011399460.013-0.2334No
172CX3CR1169057799520.013-0.2336No
173BTBD31980041 2510577 3190053 420074699840.012-0.2353No
174UBE4A6100520100720.011-0.2400No
175RBP44540131100840.010-0.2406No
176MMP71780497101240.010-0.2427No
177PGM13840408102990.007-0.2522No
178PCK17000358104950.004-0.2629No
179CFLAR2320605 6180440106070.002-0.2690No
180C1S840184 6840114106260.002-0.2700No
181MYH117100273106480.001-0.2711No
182ENPP2586054610785-0.001-0.2786No
183SLC16A4245050010825-0.002-0.2807No
184HIBCH415002510862-0.002-0.2827No
185XPO154070710863-0.002-0.2827No
186BBOX12030538 237045210869-0.002-0.2830No
187SLC1A1520372 642005910966-0.004-0.2882No
188SP3384033810973-0.004-0.2886No
189MUT690017011003-0.005-0.2901No
190SLC17A31780463 567043511242-0.009-0.3032No
191STCH399005011258-0.009-0.3040No
192GPC3618073511263-0.009-0.3042No
193DUSP31240129 684021511397-0.011-0.3114No
194CLASP2251013911412-0.011-0.3122No
195NMI52027011445-0.012-0.3139No
196GDI2237006811546-0.014-0.3193No
197PIK3C2A604059311684-0.016-0.3268No
198CASP45860047 665009311808-0.019-0.3335No
199GBAS676027811813-0.019-0.3337No
200RAN2260446 459064711827-0.019-0.3343No
201SH3BGR84040011832-0.019-0.3345No
202SERINC3203068511841-0.019-0.3348No
203PAM529052811865-0.020-0.3360No
204CXCL12580546 4150750 457006811898-0.020-0.3377No
205GCH1670364 655035811939-0.021-0.3399No
206PDCD6476023911977-0.022-0.3418No
207AUH557015211983-0.022-0.3420No
208PTHR12640711 336064712052-0.024-0.3457No
209PTPRD520008 312009712129-0.026-0.3498No
210THRAP1247012112182-0.027-0.3525No
211PLS3329008212251-0.028-0.3562No
212TSPAN8174053812307-0.030-0.3591No
213NEK7454002612346-0.030-0.3611No
214TEK635054112445-0.033-0.3664No
215NUP153700045212531-0.035-0.3709No
216PPIB428045012579-0.036-0.3734No
217GSTO1665060012651-0.038-0.3771No
218YWHAH1660133 281005312901-0.045-0.3907No
219BAMBI665046312919-0.045-0.3915No
220PFTK1178018113110-0.052-0.4017No
221MAOA1410039 461032413138-0.053-0.4030No
222CRYAA203016413187-0.055-0.4055No
223ARPC51740411 345030013268-0.058-0.4097No
224NBN730538 2470619 478059413322-0.060-0.4124No
225PFN2730040 570002613325-0.060-0.4123No
226ACTR2117033213428-0.064-0.4177No
227USP3378004713574-0.071-0.4254No
228PSMD112340538 651005313588-0.072-0.4259No
229CAPZA1314039013665-0.075-0.4298No
230HIPK111019313682-0.076-0.4304No
231GALC2260685 4810161 637004013716-0.077-0.4320No
232AZIN1345007013792-0.082-0.4358No
233TIAL14150048 651060513803-0.082-0.4361No
234HMGN34210541 467057713817-0.083-0.4365No
235SPARC169008613851-0.085-0.4381No
236E2F350162 46018013868-0.086-0.4387No
237HMGB2264060313950-0.091-0.4428No
238HSD17B4478050414030-0.096-0.4468No
239ACTA260008 123008214096-0.100-0.4501No
240DHX960017 1170095 226001414183-0.107-0.4544No
241HNRPH22630040 572067114185-0.107-0.4541No
242OAT54063214188-0.107-0.4539No
243PAPPA2589004114208-0.109-0.4545No
244NONO705001414261-0.114-0.4570No
245RERE394027914292-0.117-0.4583No
246FRMD4B677073614336-0.121-0.4602No
247BIRC3655041114380-0.125-0.4622No
248LY751990358 459013614412-0.127-0.4635No
249ARF4319066114414-0.127-0.4631No
250RBL2580446 140067014429-0.128-0.4634No
251DDX5940021 2630338 344014814526-0.137-0.4682No
252NPTN620037314541-0.138-0.4685No
253QKI5220093 613004414544-0.139-0.4682No
254RPL22407007014562-0.141-0.4686No
255CAT428015214567-0.141-0.4684No
256CCT2169011314576-0.142-0.4684No
257TGFBR21780711 1980537 655039814702-0.157-0.4747No
258RRAGA640060314729-0.160-0.4756No
259WEE1339007014732-0.160-0.4752No
260SEC22B319027814833-0.176-0.4801No
261YWHAE531043514848-0.178-0.4802No
262CYP1B1476073514892-0.185-0.4820No
263MDH16660358 676073114950-0.194-0.4845No
264AMD1629012814974-0.198-0.4850No
265NEK4430731 2060010 700033314975-0.199-0.4844No
266COPB1539003715077-0.215-0.4892No
267CLDN104070364 4590059 4920097 5080687 662027015128-0.227-0.4912No
268SEC24B460717 306004015136-0.229-0.4908No
269DPM11240050 4810019 638039815155-0.232-0.4910No
270SAP18361009215158-0.232-0.4903No
271ANK31500161 2900435 4210154 640010015162-0.233-0.4897No
272FNDC3A2690097 329004415178-0.236-0.4898No
273PICALM194028015187-0.238-0.4894No
274SCFD13440692 622036915226-0.249-0.4907No
275CALU2680403 3520056 4610348 5720176 613012115246-0.251-0.4909No
276IL7R2060088 638050015265-0.254-0.4910No
277ALG84150497 4780500 629056315283-0.258-0.4911No
278ACSL4510020 1240041 3190050 4540500 557046315284-0.258-0.4902No
279NCOA3454019515312-0.265-0.4908No
280NAP1L12510593 5900215 5090470 450079 492028015441-0.292-0.4968No
281SLC25A134920072 569072215446-0.293-0.4961No
282PTGES32190440 268052415558-0.323-0.5011No
283PPP1R23710278 140072515579-0.329-0.5011No
284ANXA5105037315605-0.338-0.5013No
285SEC23A586003515666-0.356-0.5034No
286AK3L1710060115694-0.367-0.5037No
287CREB11500717 2230358 3610600 655060115718-0.374-0.5037No
288ATF22260348 248044115819-0.409-0.5078No
289IL6ST589004715820-0.409-0.5064No
290DYRK1A319018115866-0.423-0.5075No
291PAPSS1134057615899-0.434-0.5078No
292STRN31450093 620068516018-0.471-0.5127Yes
293STAT16510204 659055316041-0.480-0.5123Yes
294TSPO110692 339045216065-0.488-0.5119Yes
295ACADSB52017016067-0.489-0.5103Yes
296MINPP1870301 2230731 2940148 5860736 611011216075-0.491-0.5091Yes
297HSPA5513067116076-0.492-0.5074Yes
298RBM32360739 570016716115-0.506-0.5078Yes
299LASP11690528 2190341 642034116129-0.511-0.5068Yes
300PSME2485008616165-0.523-0.5070Yes
301PEX11B651015216175-0.526-0.5057Yes
302F2R481018016193-0.537-0.5048Yes
303RECQL2510128 2640136 604068716194-0.537-0.5030Yes
304MSH3677057516239-0.552-0.5036Yes
305PSMC6281002116260-0.560-0.5028Yes
306ELOVL5380017016300-0.577-0.5030Yes
307ARFGEF1676049416345-0.593-0.5034Yes
308LGALS1645019316396-0.613-0.5041Yes
309MYH10264067316399-0.614-0.5022Yes
310PRPF40A1190138 219016116402-0.616-0.5002Yes
311DICER154028616417-0.623-0.4989Yes
312PUM1613050016425-0.627-0.4972Yes
313COPA257051916465-0.645-0.4971Yes
314PSMC52760315 655002116473-0.650-0.4953Yes
315NR1D22360014 454001416495-0.661-0.4943Yes
316TOP2B698030916507-0.668-0.4926Yes
317CCNG2319009516627-0.734-0.4967Yes
318HSBP1690068716666-0.758-0.4963Yes
319PROSC38048416672-0.762-0.4940Yes
320SRP72399042716680-0.767-0.4918Yes
321THEM2684074616683-0.768-0.4893Yes
322CDK2AP1234015616688-0.770-0.4869Yes
323ARHGEF18212027916713-0.785-0.4856Yes
324KRIT12640500 4230435 473018416823-0.851-0.4888Yes
325DLD4150403 659034116825-0.851-0.4860Yes
326TBL1X640052416839-0.858-0.4838Yes
327SHFM1157011416843-0.860-0.4811Yes
328RPS6KA3198070716905-0.902-0.4814Yes
329ANP32A510044 1580095 268003716930-0.919-0.4796Yes
330ASF1A705002016955-0.931-0.4778Yes
331CRYAB481061917016-0.975-0.4778Yes
332DYNLT3557039817060-0.995-0.4769Yes
333SNRPD3297005017096-1.004-0.4754Yes
334FPGT539027317130-1.019-0.4738Yes
335HMGN1265002617138-1.024-0.4707Yes
336SYPL12680706 590040317144-1.026-0.4676Yes
337FECH2810605 3120088 492041117158-1.037-0.4648Yes
338CRYZ1770110 2360484 481054117183-1.047-0.4626Yes
339TOMM70A78011417233-1.085-0.4617Yes
340CREBBP5690035 704005017238-1.091-0.4582Yes
341AP3D1454013817261-1.112-0.4557Yes
342STAT3460040 371034117338-1.177-0.4559Yes
343UGCG342005317386-1.219-0.4544Yes
344EFHA14540167 461067117387-1.221-0.4503Yes
345PRDX4380003917403-1.231-0.4470Yes
346RAB11A536007917419-1.242-0.4436Yes
347DCTD94016217424-1.245-0.4397Yes
348ETFA50347 5690040 637004417431-1.255-0.4358Yes
349NDUFA55720239 655003517440-1.261-0.4320Yes
350RAC1481068717470-1.283-0.4293Yes
351PEX3276010017473-1.288-0.4251Yes
352ITM2A460576 421008617474-1.289-0.4207Yes
353SFRS2IP730687 150037317499-1.317-0.4176Yes
354ATP6V1B2406052817500-1.319-0.4132Yes
355ATP6V1A659024217513-1.330-0.4094Yes
356OXCT1665027917537-1.358-0.4061Yes
357NDUFAF113011317550-1.372-0.4022Yes
358SH3BGRL206011017577-1.394-0.3989Yes
359SLC39A6610007217581-1.396-0.3944Yes
360LAMP21230402 198037317632-1.449-0.3923Yes
361TXNDC152039817644-1.457-0.3880Yes
362DDX3X219002017667-1.484-0.3842Yes
363CFDP1700011217687-1.496-0.3802Yes
364ACBD3276017017738-1.570-0.3777Yes
365IFNGR161057717750-1.583-0.3730Yes
366RNF6264003517758-1.588-0.3680Yes
367COPS2306014217767-1.596-0.3631Yes
368ABI1285015217775-1.612-0.3581Yes
369H2AFZ147016817794-1.628-0.3536Yes
370PTPRC130402 529014817828-1.663-0.3498Yes
371TOB1415013817841-1.671-0.3449Yes
372COPS51340722 505021517865-1.699-0.3404Yes
373MORF4L2645013317889-1.716-0.3359Yes
374PPP2CB557059317893-1.724-0.3303Yes
375HNRPC1570133 361013117901-1.733-0.3249Yes
376ATG1278016717961-1.792-0.3221Yes
377MAPRE1329003717996-1.839-0.3178Yes
378FBXO96420035 705012918040-1.879-0.3138Yes
379PARG5013918076-1.917-0.3093Yes
380TOPORS406059218081-1.928-0.3031Yes
381HNRPK1190348 2060411 2570092 684055118088-1.938-0.2969Yes
382MSN406004418102-1.972-0.2910Yes
383ETF1677007518136-2.016-0.2860Yes
384PJA243053718146-2.037-0.2797Yes
385NXF1157037718162-2.053-0.2736Yes
386SNX22470068 3360364 651006418172-2.069-0.2671Yes
387PTP4A2870154 6040070 6130242 676022418178-2.078-0.2604Yes
388RALBP1478063218186-2.086-0.2538Yes
389FNTA7005918207-2.120-0.2478Yes
390RB1590033818226-2.152-0.2416Yes
391PDIA3212027018266-2.219-0.2363Yes
392SERINC1665002018284-2.243-0.2297Yes
393AHCYL154060918288-2.251-0.2223Yes
394H3F3B141030018304-2.281-0.2154Yes
395HAT1371008218315-2.321-0.2082Yes
396NARS166072218353-2.403-0.2021Yes
397IDH1199002118365-2.432-0.1946Yes
398RPP14704001418382-2.470-0.1872Yes
399CYCS203007218389-2.490-0.1791Yes
400LEPROTL1690011018416-2.537-0.1720Yes
401PSMA4456042718418-2.539-0.1636Yes
402ATP2A21090075 399027918452-2.633-0.1565Yes
403RAB1A237067118476-2.727-0.1486Yes
404AP3S1557004418484-2.755-0.1398Yes
405PSMD14569059318497-2.806-0.1310Yes
406OGT2360131 461033318507-2.829-0.1220Yes
407PPID268070718527-2.925-0.1132Yes
408APLP2361003718528-2.931-0.1034Yes
409JTB698040018541-3.002-0.0940Yes
410PKM26520403 7050018547-3.058-0.0840Yes
411PRKAR1A345036918550-3.071-0.0738Yes
412WSB187056318567-3.256-0.0637Yes
413SC4MOL314052418585-3.536-0.0528Yes
414MARCKS704045018595-3.674-0.0409Yes
415SFRS1236044018601-3.775-0.0285Yes
416MCL1166067218610-4.296-0.0145Yes
417SMAD5570049718612-4.4070.0002Yes
Table: GSEA details [plain text format]



Fig 2: FLECHNER_KIDNEY_TRANSPLANT_WELL_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: FLECHNER_KIDNEY_TRANSPLANT_WELL_UP: Random ES distribution   
Gene set null distribution of ES for FLECHNER_KIDNEY_TRANSPLANT_WELL_UP