Details for gene set CROONQUIST_IL6_STROMA

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_wtNotch.phenotype_truncNotch_versus_wtNotch.cls #truncNotch_versus_wtNotch
Phenotype	phenotype_truncNotch_versus_wtNotch.cls#truncNotch_versus_wtNotch
Upregulated in class	truncNotch
GeneSet	CROONQUIST_IL6_STROMA_UP
Enrichment Score (ES)	0.70152897
Normalized Enrichment Score (NES)	1.636854
Nominal p-value	0.0016666667
FDR q-value	0.15905797
FWER p-Value	0.858

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	DUSP1	6860121	29	3.727	0.1495	Yes
2	TGFBI	2060446 6900112	191	2.742	0.2520	Yes
3	LAMA4	3170647	306	2.437	0.3447	Yes
4	TGM2	5360452	503	2.131	0.4205	Yes
5	FSCN1	3450463	688	1.922	0.4885	Yes
6	LOXL1	3520537	1050	1.577	0.5330	Yes
7	CCL4	50368 430047	1374	1.353	0.5705	Yes
8	NFKBIA	1570152	1757	1.101	0.5946	Yes
9	NOTCH3	3060603	1919	1.020	0.6272	Yes
10	IER3	5860021	2014	0.990	0.6623	Yes
11	IGFBP7	520411 3060110 5290152	2028	0.984	0.7015	Yes
12	TPM2	520735 3870390	3306	0.461	0.6515	No
13	NR4A2	60273	3424	0.433	0.6628	No
14	FOS	1850315	3645	0.386	0.6666	No
15	COL6A3	2640717 4070064 5390717	3687	0.376	0.6796	No
16	COL1A2	380364	4010	0.319	0.6752	No
17	SERPINE1	4210403	4698	0.222	0.6472	No
18	CXCL2	610398	4866	0.205	0.6465	No
19	NNMT	450471	4995	0.192	0.6474	No
20	CCL3	2810092	5023	0.190	0.6537	No
21	CTGF	4540577	5729	0.135	0.6212	No
22	THBS2	2850136	5807	0.130	0.6223	No
23	LOX	5340372	9599	0.019	0.4191	No
24	TMSB4X	6620114	9838	0.014	0.4069	No
25	RGS2	1090736	10839	-0.002	0.3531	No
26	IGFBP3	2370500	12879	-0.044	0.2452	No
27	FOSB	1940142	13018	-0.049	0.2398	No
28	IL6	380133	13317	-0.060	0.2262	No
29	SPARC	1690086	13851	-0.085	0.2010	No
30	ACTA2	60008 1230082	14096	-0.100	0.1919	No
31	SULF1	430575	14124	-0.103	0.1946	No
32	COL6A1	1410670 2940091 6510086	16155	-0.518	0.1064	No
33	SLC25A4	2360519	16458	-0.642	0.1161	No