Details for gene set REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_wtNotch.phenotype_truncNotch_versus_wtNotch.cls #truncNotch_versus_wtNotch
Phenotype	phenotype_truncNotch_versus_wtNotch.cls#truncNotch_versus_wtNotch
Upregulated in class	truncNotch
GeneSet	REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL
Enrichment Score (ES)	0.72955006
Normalized Enrichment Score (NES)	1.6151516
Nominal p-value	0.008460237
FDR q-value	0.5598315
FWER p-Value	0.783

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	TYROBP	2230020	258	2.536	0.1225	Yes
2	CD160	4210377	298	2.447	0.2520	Yes
3	CD200	940725 5260647	347	2.371	0.3770	Yes
4	SELL	1190500	673	1.940	0.4639	Yes
5	ITGAL	1450324	1225	1.458	0.5127	Yes
6	C3	1740372	1500	1.267	0.5661	Yes
7	CD3D	2810739	1543	1.243	0.6307	Yes
8	IFITM1	1690601 3120438 6510075	1915	1.022	0.6657	Yes
9	VCAM1	2900450	2305	0.852	0.6906	Yes
10	CDH1	1940736	2391	0.809	0.7296	Yes
11	FCGR2B	780750	3535	0.410	0.6901	No
12	ITGB2	6380348	3899	0.338	0.6888	No
13	CD3E	3800056	4405	0.258	0.6755	No
14	CXADR	6370068	6590	0.091	0.5630	No
15	CD3G	2680288	6744	0.086	0.5593	No
16	KIR3DL1	4060280 4920685	6960	0.078	0.5519	No
17	B2M	5080332 5130059	8057	0.048	0.4956	No
18	CD19	6940692	8125	0.046	0.4944	No
19	CD96	2320048	8611	0.036	0.4703	No
20	CRTAM	4480110	10627	0.002	0.3620	No
21	CD226	3390438	10662	0.001	0.3603	No
22	CD40LG	3120270	11900	-0.020	0.2948	No
23	ITGA4	2470739	14648	-0.151	0.1552	No
24	CD81	5270093	15375	-0.280	0.1312	No
25	ITGB1	5080156 6270528	16739	-0.801	0.1010	No

Fig 3: REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL: Random ES distribution
Gene set null distribution of ES for REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL