Details for gene set CELL_CYCLE

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #truncNotch_versus_absentNotch
Phenotype	phenotype_absentNotch_versus_truncNotch.cls#truncNotch_versus_absentNotch
Upregulated in class	absentNotch
GeneSet	CELL_CYCLE_PROCESS
Enrichment Score (ES)	-0.5188517
Normalized Enrichment Score (NES)	-1.5466548
Nominal p-value	0.0
FDR q-value	0.6900679
FWER p-Value	0.997

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	BCAT1	3290128 4050408	46	4.735	0.0292	No
2	MSH5	1340019 4730333	294	3.221	0.0373	No
3	CDC25B	6940102	346	3.071	0.0551	No
4	CDK10	60164 1190717 3130128 3990044	676	2.453	0.0537	No
5	CHMP1A	5550441	807	2.253	0.0617	No
6	MAD2L2	1240358	824	2.237	0.0758	No
7	PRMT5	2760180 4590072	894	2.145	0.0864	No
8	CDK4	540075 4540600	1065	1.953	0.0902	No
9	POLD1	4830026	1142	1.881	0.0987	No
10	UBE2C	6130017	1159	1.873	0.1103	No
11	DCTN2	540471 3780717	1404	1.640	0.1081	No
12	CDKN2D	6040035	1746	1.413	0.0991	No
13	MAP3K11	7000039	1887	1.287	0.1001	No
14	TARDBP	870390 2350093	2211	1.070	0.0897	No
15	SMC1A	3060600 5700148 5890113 6370154	2340	1.001	0.0895	No
16	NUMA1	6520576	2509	0.904	0.0864	No
17	CHFR	3390050 6450300 6450736	2514	0.901	0.0922	No
18	BIRC5	110408 580014 1770632	3098	0.608	0.0647	No
19	CDKN1B	3800025 6450044	3383	0.512	0.0527	No
20	DUSP13	6400152	3397	0.508	0.0554	No
21	TGFB1	1940162	3412	0.500	0.0580	No
22	BOLL	6100743	3416	0.500	0.0612	No
23	APBB1	2690338	3452	0.486	0.0625	No
24	USH1C	1570372 4230364	3509	0.468	0.0626	No
25	CDKN2C	5050750 5130148	3520	0.464	0.0652	No
26	SMC3	870546 1400411 5700039 6450577	3621	0.436	0.0627	No
27	CDCA5	5670131	3717	0.414	0.0603	No
28	ANLN	1780113 2470537 6840047	3777	0.399	0.0598	No
29	TOP3A	7000435	3933	0.366	0.0538	No
30	CENTD2	60408 2510156 6100494	4111	0.332	0.0465	No
31	CUL2	4200278	4463	0.274	0.0293	No
32	XRCC2	4920706	4777	0.232	0.0139	No
33	PAFAH1B1	4230333 6420121 6450066	4946	0.213	0.0062	No
34	MDM4	4070504 4780008	5054	0.200	0.0017	No
35	BUB1	5390270	5073	0.197	0.0021	No
36	ANAPC11	1780601	5243	0.179	-0.0059	No
37	SUGT1	1690670	5398	0.167	-0.0131	No
38	GFI1B	4570131	5642	0.149	-0.0253	No
39	RCC1	2480358	5687	0.146	-0.0267	No
40	PLK1	1780369 2640121	5726	0.143	-0.0278	No
41	PIN1	2970408	6011	0.123	-0.0424	No
42	TTN	2320161 4670056 6550026	6492	0.098	-0.0677	No
43	KATNA1	6290048	6494	0.098	-0.0671	No
44	NBN	730538 2470619 4780594	6543	0.095	-0.0691	No
45	RAD51	6110450 6980280	6595	0.093	-0.0712	No
46	TIMELESS	3710315	6892	0.082	-0.0867	No
47	CETN1	6020056	6926	0.081	-0.0879	No
48	CDKN3	110520	7058	0.076	-0.0945	No
49	ANAPC10	870086 1170037 2260129	7177	0.072	-0.1004	No
50	KIF15	610731 4070731 6520014	7299	0.068	-0.1065	No
51	EREG	50519 4920129	7329	0.067	-0.1077	No
52	CIT	2370601	7958	0.051	-0.1414	No
53	CENPE	2850022	8038	0.049	-0.1453	No
54	RAD1	4200551	8047	0.049	-0.1454	No
55	NEK2	2120520	8069	0.049	-0.1462	No
56	ATM	3610110 4050524	8101	0.048	-0.1476	No
57	TPD52L1	4590711 5570575	8714	0.035	-0.1805	No
58	KIF22	1190368	8827	0.032	-0.1864	No
59	SYCP1	2570010	8861	0.032	-0.1879	No
60	RAN	2260446 4590647	8979	0.029	-0.1941	No
61	NPM2	6040139	9015	0.028	-0.1958	No
62	FBXO5	2630551	10381	0.005	-0.2697	No
63	KIF11	5390139	10668	0.000	-0.2852	No
64	CCNA1	6290113	10698	-0.000	-0.2868	No
65	DMC1	450341	10741	-0.001	-0.2890	No
66	EPGN	6980450	11154	-0.008	-0.3113	No
67	TGFA	1570332	11228	-0.009	-0.3152	No
68	DCTN3	6840131	11249	-0.010	-0.3162	No
69	CUL5	450142	11750	-0.019	-0.3432	No
70	HSPA2	6420592	11784	-0.020	-0.3448	No
71	MSH4	3940068	11859	-0.021	-0.3487	No
72	PAM	5290528	11933	-0.023	-0.3525	No
73	CENPF	5050088	12052	-0.026	-0.3587	No
74	NPM1	4730427	12434	-0.034	-0.3791	No
75	SPO11	540288 4780239	12551	-0.038	-0.3852	No
76	CDC25C	2570673 4760161 6520707	12613	-0.040	-0.3882	No
77	CLIP1	2850162 6770397	12816	-0.045	-0.3989	No
78	TTK	3800129	12873	-0.047	-0.4016	No
79	POLA1	4760541	13060	-0.053	-0.4113	No
80	PML	50093 2190435 2450402 3840082	13638	-0.078	-0.4420	No
81	ACVR1	6840671	14141	-0.115	-0.4685	No
82	RAD51L1	4010112 5860435	14207	-0.122	-0.4712	No
83	LATS2	4480593 6020494	14232	-0.125	-0.4716	No
84	APBB2	5130403	14264	-0.129	-0.4725	No
85	CDKN2B	6020040	14377	-0.141	-0.4776	No
86	SMC4	5910240	14498	-0.158	-0.4830	No
87	CDC23	3190593	14662	-0.186	-0.4906	No
88	ABL1	1050593 2030050 4010114	14663	-0.186	-0.4894	No
89	CHEK1	50167 1940300	14675	-0.188	-0.4887	No
90	TIPIN	1570301 2480113	14713	-0.197	-0.4894	No
91	NEK6	3360687	14798	-0.213	-0.4925	No
92	CDK6	4920253	14861	-0.226	-0.4944	No
93	PIM2	840136 5720692 7100577	14884	-0.231	-0.4940	No
94	CDKN1A	4050088 6400706	14886	-0.231	-0.4925	No
95	RAD50	4050184 6770746	14941	-0.246	-0.4938	No
96	RACGAP1	3990162 6620736	15317	-0.354	-0.5117	No
97	SSSCA1	1240402 780309	15332	-0.361	-0.5101	No
98	RAD17	5220739	15371	-0.377	-0.5096	No
99	PPP5C	3130047	15422	-0.394	-0.5097	No
100	TUBG1	3140204	15432	-0.397	-0.5075	No
101	CCNA2	5290075	15560	-0.440	-0.5115	No
102	ACVR1B	3610446 5570195	15636	-0.471	-0.5124	No
103	EGF	5220154	15653	-0.474	-0.5101	No
104	RAD51L3	2230609 2810286 3190008 3390053 4230168	15681	-0.484	-0.5083	No
105	KIF2C	6940082	15688	-0.487	-0.5054	No
106	CDC6	4570296 5360600	15903	-0.578	-0.5131	No
107	TBRG4	3610239 6370594	16010	-0.629	-0.5146	Yes
108	DLG7	3120041	16026	-0.639	-0.5112	Yes
109	CUL4A	1170088 2320008 2470278	16109	-0.671	-0.5111	Yes
110	DDX11	6590671	16110	-0.672	-0.5066	Yes
111	CDK2AP1	2340156	16119	-0.677	-0.5026	Yes
112	PCBP4	6350722	16142	-0.693	-0.4991	Yes
113	MYH10	2640673	16190	-0.718	-0.4969	Yes
114	BRCA2	4280372	16352	-0.810	-0.5002	Yes
115	RAD54L	2970041	16448	-0.869	-0.4995	Yes
116	STAG3	3830112	16449	-0.869	-0.4937	Yes
117	RAD21	1990278	16575	-0.945	-0.4941	Yes
118	NDE1	1580242 3830097	16588	-0.950	-0.4884	Yes
119	NDC80	4120465	16626	-0.969	-0.4840	Yes
120	NOLC1	2350195	16652	-0.983	-0.4788	Yes
121	CDC7	4060546 4850041	16711	-1.007	-0.4752	Yes
122	AURKA	780537	16736	-1.026	-0.4696	Yes
123	TUBE1	2360079 6520685	16739	-1.028	-0.4628	Yes
124	CDK2	130484 2260301 4010088 5050110	16838	-1.088	-0.4609	Yes
125	KNTC1	430079	16852	-1.098	-0.4542	Yes
126	POLS	5890438	16883	-1.130	-0.4483	Yes
127	E2F1	5360093	17060	-1.284	-0.4493	Yes
128	GFI1	730180	17066	-1.293	-0.4409	Yes
129	CDKN2A	4670215 4760047	17178	-1.404	-0.4375	Yes
130	CDC16	1940706	17321	-1.556	-0.4348	Yes
131	PTPRC	130402 5290148	17334	-1.574	-0.4249	Yes
132	NUSAP1	940048 3120435	17345	-1.583	-0.4149	Yes
133	CUL1	1990632	17375	-1.620	-0.4056	Yes
134	ZW10	2900735 3520687	17385	-1.639	-0.3952	Yes
135	STMN1	1990717	17470	-1.733	-0.3881	Yes
136	BUB1B	1450288	17575	-1.842	-0.3814	Yes
137	CUL3	1850520	17579	-1.848	-0.3693	Yes
138	CDKN1C	6520577	17620	-1.891	-0.3588	Yes
139	RAD52	110093	17646	-1.925	-0.3473	Yes
140	MRE11A	3850601 4670332	17669	-1.971	-0.3353	Yes
141	ANAPC5	730164 7100685	17694	-2.010	-0.3231	Yes
142	LIG3	2940300	17720	-2.055	-0.3108	Yes
143	CD28	1400739 4210093	17795	-2.145	-0.3004	Yes
144	KHDRBS1	1240403 6040040	17875	-2.247	-0.2897	Yes
145	PPP6C	2450670	17945	-2.361	-0.2776	Yes
146	KIF23	5570112	17948	-2.363	-0.2619	Yes
147	POLE	6020538	18011	-2.478	-0.2487	Yes
148	ZWINT	6940670	18025	-2.496	-0.2328	Yes
149	TPX2	6420324	18174	-2.830	-0.2218	Yes
150	AKAP8	4210026	18180	-2.839	-0.2031	Yes
151	CETN3	3170402	18192	-2.872	-0.1845	Yes
152	MAD2L1	4480725	18199	-2.886	-0.1656	Yes
153	RB1	5900338	18205	-2.912	-0.1464	Yes
154	PRC1	870092 5890204	18210	-2.929	-0.1270	Yes
155	KPNA2	3450114	18222	-2.961	-0.1078	Yes
156	MPHOSPH6	5570164	18246	-3.011	-0.0889	Yes
157	SKP2	360711 380093 4810368	18370	-3.435	-0.0726	Yes
158	NCAPH	6220435	18392	-3.506	-0.0503	Yes
159	ANAPC4	4540338	18469	-3.854	-0.0287	Yes
160	GSPT1	5420050	18598	-5.469	0.0010	Yes