Details for gene set HCC_SURVIVAL_GOOD_VS_POOR

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #truncNotch_versus_absentNotch
Phenotype	phenotype_absentNotch_versus_truncNotch.cls#truncNotch_versus_absentNotch
Upregulated in class	truncNotch
GeneSet	HCC_SURVIVAL_GOOD_VS_POOR_UP
Enrichment Score (ES)	0.60000175
Normalized Enrichment Score (NES)	1.6734308
Nominal p-value	0.0
FDR q-value	0.6617261
FWER p-Value	0.568

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CRYL1	1340427	51	4.688	0.0629	Yes
2	ACADS	110746	80	4.312	0.1218	Yes
3	C2	5390465	128	3.885	0.1736	Yes
4	KHK	1090204 3870204	204	3.498	0.2185	Yes
5	PINK1	380044 580577	271	3.282	0.2609	Yes
6	ALDH4A1	2450450	513	2.687	0.2855	Yes
7	EGLN2	540086	543	2.645	0.3210	Yes
8	ECHS1	2970184	560	2.631	0.3570	Yes
9	PCCB	50670	597	2.559	0.3909	Yes
10	MVK	1450717	683	2.434	0.4204	Yes
11	MAP4K1	4060692	715	2.392	0.4522	Yes
12	SERPINF1	7040367	906	2.125	0.4717	Yes
13	ABHD6	630717	1305	1.735	0.4745	Yes
14	DCXR	4730551	1403	1.640	0.4922	Yes
15	SLC25A10	1400609	1432	1.619	0.5133	Yes
16	SLC35D1	1740520	1666	1.469	0.5213	Yes
17	SERPING1	5550440	1821	1.332	0.5316	Yes
18	ENPP5	1780338	1858	1.308	0.5480	Yes
19	HAGH	540358	2092	1.148	0.5515	Yes
20	NDRG2	450403	2275	1.032	0.5561	Yes
21	CPT2	3940504 6180075	2421	0.955	0.5616	Yes
22	INSIG1	1500332 3450458 4540301	2612	0.848	0.5633	Yes
23	IVD	2510673	2674	0.812	0.5713	Yes
24	STARD10	1400619 4570170	2762	0.772	0.5774	Yes
25	EPHX1	1740136	2765	0.769	0.5881	Yes
26	ACOX2	450017	2918	0.683	0.5894	Yes
27	CRAT	540020 2060364 3520148	2919	0.683	0.5990	Yes
28	PPAP2A	1170397 3440288 3930270	3063	0.624	0.6000	Yes
29	AMT	3180450	3348	0.522	0.5920	No
30	SLC38A3	5340142	3712	0.415	0.5782	No
31	NDUFS2	4850020 6200402	4091	0.335	0.5624	No
32	ABCG8	4780605	4132	0.328	0.5649	No
33	RDH5	2970736 3940632 5340730 6370093 4610059	4262	0.307	0.5622	No
34	G6PC	430093	4365	0.289	0.5607	No
35	SLC2A2	5130537 5720722 6770079	4490	0.270	0.5578	No
36	SERPIND1	6110059	4592	0.254	0.5559	No
37	SALL1	5420020 7050195	4713	0.239	0.5528	No
38	F12	1090215 3520736	4744	0.236	0.5545	No
39	MASP2	360110	4844	0.226	0.5523	No
40	VPREB1	3520280	4951	0.212	0.5495	No
41	ABCC2	380202 5390300	4990	0.208	0.5504	No
42	MSRA	4570411	5039	0.203	0.5506	No
43	GLYAT	6200239	5342	0.171	0.5367	No
44	PRDX6	4920397 6380601	5346	0.171	0.5389	No
45	INSR	1190504	5480	0.161	0.5340	No
46	ABCA6	130538 1050706	5638	0.150	0.5276	No
47	PCK1	7000358	5680	0.146	0.5274	No
48	AR	6380167	5708	0.144	0.5280	No
49	C1QTNF4	60619	5933	0.128	0.5177	No
50	CUTL2	2940692 6220687	6189	0.114	0.5055	No
51	CPB2	4150167 6100333 6590735	6296	0.108	0.5013	No
52	CABIN1	6900446	6874	0.082	0.4712	No
53	OTC	1740494	6998	0.078	0.4657	No
54	MST1	1400403	7014	0.077	0.4659	No
55	APOC3	2030168	7213	0.071	0.4562	No
56	CPN2	6590291	7261	0.070	0.4547	No
57	ASGR1	1850088	7884	0.053	0.4218	No
58	MUCDHL	5720056	7927	0.052	0.4203	No
59	PAH	3800309	8029	0.050	0.4155	No
60	TTPA	630576	8030	0.050	0.4162	No
61	F13B	6220278	8063	0.049	0.4151	No
62	SERPINC1	1780717	8422	0.041	0.3964	No
63	SULT2A1	2650286	8690	0.035	0.3824	No
64	DIO1	4570279 5290112 5420148	8712	0.035	0.3818	No
65	KLK3	1500278	8802	0.033	0.3774	No
66	DPYS	3130670	8816	0.033	0.3772	No
67	GJB1	1240441	8839	0.032	0.3764	No
68	APCS	2060500	8989	0.029	0.3688	No
69	AOX1	110082 6290450	9082	0.027	0.3642	No
70	AMACR	780215	9126	0.026	0.3623	No
71	MTSS1	780435 2370114	9419	0.021	0.3468	No
72	NF1	6980433	9532	0.019	0.3410	No
73	ABCG5	2810670	9608	0.018	0.3372	No
74	MPDZ	130026 1990064 4050577	9781	0.015	0.3281	No
75	WNT11	1230278	9817	0.014	0.3264	No
76	HPD	3120519	9868	0.013	0.3239	No
77	CDO1	2480279	10034	0.011	0.3151	No
78	APOA5	6130471	10169	0.008	0.3080	No
79	ITIH1	670044	10178	0.008	0.3077	No
80	PIPOX	70750	10252	0.007	0.3038	No
81	CES2	5340609	10413	0.004	0.2952	No
82	ANXA9	1190195	10876	-0.003	0.2703	No
83	RGN	6200095	11573	-0.016	0.2329	No
84	UGT1A6	4610368 6900086 4540092 2630075	11794	-0.020	0.2213	No
85	CES1	1400494	12152	-0.028	0.2024	No
86	HAO1	7050093	12234	-0.030	0.1985	No
87	PCYT2	2630092 4590278	12458	-0.035	0.1869	No
88	AQP9	2650047	12489	-0.036	0.1858	No
89	TTBK1	60605 1850722	12558	-0.038	0.1826	No
90	HGD	460390	12767	-0.044	0.1720	No
91	PKLR	1170400 2470114	12953	-0.050	0.1627	No
92	LPIN1	1770358 3120059	13043	-0.052	0.1586	No
93	BAAT	730739	13136	-0.056	0.1544	No
94	FMO3	2480369	13403	-0.066	0.1410	No
95	MYRIP	1580471	13410	-0.066	0.1416	No
96	SLC27A5	2850717	13957	-0.099	0.1135	No
97	RHBG	2810736	14019	-0.105	0.1116	No
98	SELENBP1	3850575	14125	-0.114	0.1076	No
99	CES3	5050167 3290458	14158	-0.117	0.1075	No
100	ZP3	4060767	14203	-0.122	0.1068	No
101	SLC6A12	3170685	14224	-0.124	0.1075	No
102	HYAL1	3850341	14248	-0.127	0.1080	No
103	EHHADH	6200315	14685	-0.191	0.0871	No
104	SRD5A1	5910347	15304	-0.352	0.0586	No
105	ITPR2	5360128	15567	-0.445	0.0507	No
106	F10	3830450	15780	-0.526	0.0466	No
107	AMFR	2810041	16168	-0.709	0.0356	No
108	SEC14L2	2640370	16305	-0.786	0.0393	No
109	SGPL1	4480059	16404	-0.840	0.0457	No
110	ALAS1	6400440	16685	-0.999	0.0446	No
111	IL6R	520706 3800215	16989	-1.219	0.0453	No
112	SPINK2	3990093	17147	-1.374	0.0560	No
113	MRPL46	360736	17412	-1.663	0.0651	No