DatasetSet_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls
#truncNotch_versus_absentNotch
Phenotypephenotype_absentNotch_versus_truncNotch.cls#truncNotch_versus_absentNotch
Upregulated in classabsentNotch
GeneSetFLECHNER_KIDNEY_TRANSPLANT_WELL_UP
Enrichment Score (ES)-0.53822446
Normalized Enrichment Score (NES)-1.7614738
Nominal p-value0.0
FDR q-value0.0271716
FWER p-Value0.25
Table: GSEA Results Summary



Fig 1: Enrichment plot: FLECHNER_KIDNEY_TRANSPLANT_WELL_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1KHK1090204 38702042043.498-0.0025No
2PSMB969804712123.4730.0058No
3GOT129404652203.4380.0139No
4TAPBP19801102313.4090.0219No
5RAB7L14304502503.3430.0292No
6TSPO110692 33904523413.0830.0319No
7MYH93120091 48502923742.9940.0376No
8COMT360687 510577 57000924622.7780.0398No
9MRPS18B55700865222.6710.0432No
10SLC25A140504026372.5090.0432No
11PPP2R1A20602797142.3950.0450No
12PARP14780446 64003388042.2590.0457No
13DYNLL155701138542.1930.0485No
14HSPA82120315 1050132 65507469302.0900.0495No
15DPYSL22100427 3130112 570032410471.9660.0481No
16PGK11570494 63030010551.9600.0526No
17RBPMS399049411931.8370.0496No
18MVP401025312071.8230.0534No
19MRPS687016412541.7720.0553No
20VAT1105004013081.7320.0567No
21CYB5R3430097 686040013481.6950.0588No
22GNB2L1590052014211.6300.0589No
23UQCRC152005314501.6070.0614No
24DDOST268073114591.5970.0649No
25GCH1670364 655035815271.5510.0651No
26TGFBR21780711 1980537 655039815641.5250.0669No
27CRYAB481061915771.5170.0700No
28SEPT61740739 522040216511.4800.0697No
29DSCR14540048 622003916571.4770.0731No
30PSME2485008616731.4660.0759No
31ZMYND11630181 2570019 4850138 536004017251.4330.0767No
32PARK7456019517441.4150.0792No
33ADD34150739 539060017451.4150.0827No
34PAPSS1134057618571.3080.0799No
35BCAP31119052019001.2740.0808No
36ARF6352002619021.2730.0839No
37SFRS250707 38059319551.2370.0841No
38HNRPA2B11240619 6200161 6200494 698040820701.1600.0807No
39RPL36AL539002520931.1470.0824No
40TARDBP870390 235009322111.0700.0786No
41TBCA640009523161.0120.0754No
42RHOA580142 5900131 534045023371.0020.0768No
43ITM2A460576 421008623480.9970.0787No
44IMMT870450 428043823540.9960.0810No
45ADH56290100 638071123570.9950.0833No
46H2AFV2030577 522012923890.9750.0840No
47DEK1050451 456003725050.9060.0800No
48EIF3S2380711 870433 245061925430.8830.0801No
49QDPR61001726540.8250.0762No
50HSBP1690068727180.7890.0747No
51ACTG154021528770.7020.0677No
52EEF1D2320524 251034129090.6890.0677No
53CCT2169011329350.6780.0681No
54PRKRA251060029760.6590.0675No
55SHOC21340064 157054630170.6420.0669No
56NAP1L12510593 5900215 5090470 450079 492028030380.6340.0674No
57TNFSF10317030031440.5940.0631No
58PKN2940746 235016831930.5770.0619No
59FBXO96420035 705012932080.5710.0625No
60UBE2N520369 290004733330.5270.0570No
61MTMR4454052434600.4840.0513No
62VIM2043134650.4830.0523No
63HERPUD1710044034960.4700.0518No
64SRRM1611002534980.4690.0529No
65SWAP702810577 2850739 513059435160.4660.0532No
66STAT16510204 659055335380.4600.0532No
67RAB8A3610594 602073636070.4390.0505No
68USP14730377 405033336940.4190.0468No
69COL4A1174057537250.4110.0462No
70SCP2520092 1570692 2570066 620053737980.3950.0432No
71EIF3S5655028038150.3930.0433No
72IL7R2060088 638050038540.3830.0422No
73NONO705001438810.3770.0417No
74VTI1B3140364 651049740270.3470.0346No
75HADH1690341 383046540350.3460.0351No
76DNAJA11660010 2320358 684013641680.3230.0286No
77CD443990072 4850671 5860411 6860148 705055143410.2930.0199No
78COL3A16420273 662004445570.2600.0087No
79TSC22D11340739 604018146730.2440.0030No
80PPP2R5C3310121 665067247240.2380.0009No
81HPGD677019247400.2360.0006No
82PLOD2336042748940.219-0.0072No
83PAFAH1B14230333 6420121 645006649460.213-0.0095No
84HSPE1317043849650.210-0.0100No
85ZMPSTE241090112 2030593 3780129 459004449670.210-0.0095No
86SLC22A2567052050590.199-0.0140No
87GSN383016852670.177-0.0249No
88DST430026 1090035 2340577 3170068 3870112 4780519 6400167 6450358 704034754130.166-0.0325No
89PTPRD520008 312009754480.164-0.0339No
90BMP2K60541 557050454510.163-0.0336No
91HNRPR2320440 2900601 461000854780.161-0.0347No
92CD2AP194036954980.159-0.0353No
93GULP12230725 2350039 557044655400.156-0.0372No
94BTBD31980041 2510577 3190053 420074655770.153-0.0388No
95ARID5B11040356310.150-0.0413No
96PCK1700035856800.146-0.0436No
97MEGF9232009756960.145-0.0440No
98THEM2684074657420.142-0.0462No
99C1D421009258470.135-0.0515No
100PHKB2060735 423048758950.131-0.0538No
101AHR456067159430.128-0.0561No
102CXCL12580546 4150750 457006859560.127-0.0564No
103SPARCL1199034860470.121-0.0611No
104GALNT14070487 6130100 6250132 690004860490.121-0.0608No
105KNG16400576 677034760760.120-0.0619No
106CRYM394052860820.119-0.0619No
107GBP178007562090.113-0.0686No
108C1S840184 684011464820.098-0.0833No
109LRP21400204 329070665020.097-0.0841No
110NBN730538 2470619 478059465430.095-0.0860No
111CREB3L2339048465990.093-0.0888No
112MMP7178049767000.089-0.0941No
113SYPL12680706 590040367800.086-0.0982No
114MAOA1410039 461032468560.083-0.1021No
115RHOBTB3401068769480.080-0.1069No
116NMI52027069710.079-0.1079No
117PRKCI542013971780.072-0.1191No
118ERBB3589037271850.072-0.1192No
119IFI16652060172050.071-0.1201No
120UBXD2428009277080.057-0.1475No
121LEPR1340398 319032477180.056-0.1479No
122CNIH2190484 508060977190.056-0.1477No
123MINPP1870301 2230731 2940148 5860736 611011277250.056-0.1479No
124TM9SF1276033377710.055-0.1502No
125CDH111230133 2100180 461011077720.055-0.1501No
126PDCD6476023978510.054-0.1542No
127PGM1384040878990.053-0.1567No
128FGL2317073179590.051-0.1598No
129ACSM36220170 2650706 590002083650.042-0.1819No
130MYO1B77037284430.041-0.1861No
131TUSC3169041184600.040-0.1869No
132BBOX12030538 237045284630.040-0.1869No
133LUM542007984940.040-0.1884No
134FABP4505011484980.039-0.1885No
135TRIM2430546 117028685140.039-0.1892No
136NUP501240519 2640390 2650471 473013386260.037-0.1952No
137TIAL14150048 651060586630.036-0.1971No
138WDFY33610041 4560333 457027387470.034-0.2016No
139RAN2260446 459064789790.029-0.2142No
140TEK635054189930.029-0.2148No
141ACTR2117033290230.028-0.2164No
142SERPINE2281039090300.028-0.2166No
143KCNJ1570176 690075090460.028-0.2174No
144ANK2651054691090.027-0.2207No
145PSMD112340538 651005391690.025-0.2239No
146TNFRSF11B461044692440.024-0.2279No
147STCH399005092570.024-0.2285No
148CAT428015293330.023-0.2326No
149PSMA35900047 704016195380.019-0.2437No
150SDCBP460487 2190039 527044195770.018-0.2458No
151ANXA7611044695950.018-0.2467No
152GBE1219036896060.018-0.2472No
153SLC17A31780463 567043597530.015-0.2552No
154EPS8705020498370.014-0.2597No
155RFK105007098510.014-0.2604No
156NEK4430731 2060010 700033398700.013-0.2613No
157PLSCR1265030199520.012-0.2657No
158UGT8371012899640.012-0.2663No
159SFRP16980315100170.011-0.2691No
160SERINC32030685100220.011-0.2693No
161PLS33290082101320.009-0.2753No
162RBP44540131101930.008-0.2786No
163DDX5940021 2630338 3440148102570.007-0.2820No
164BNIP33140270104170.004-0.2907No
165NUP1537000452104300.004-0.2914No
166OAT540632105540.002-0.2982No
167NEK74540026106040.001-0.3008No
168CASP45860047 6650093106190.001-0.3016No
169EPS15420021510846-0.003-0.3140No
170SEC23A586003510893-0.004-0.3165No
171TSPAN8174053810995-0.005-0.3221No
172NDUFS1265025311118-0.008-0.3288No
173XPO154070711124-0.008-0.3290No
174DSTN314059211144-0.008-0.3300No
175PTHR12640711 336064711201-0.009-0.3331No
176AUH557015211416-0.013-0.3448No
177PFN2730040 570002611442-0.014-0.3462No
178SLC34A143004411580-0.016-0.3536No
179ENPP2586054611614-0.017-0.3554No
180CLASP2251013911667-0.018-0.3582No
181CRYAA203016411669-0.018-0.3582No
182HIBCH415002511883-0.022-0.3699No
183PAM529052811933-0.023-0.3725No
184CAPZA1314039011961-0.024-0.3739No
185HSD17B4478050411993-0.024-0.3756No
186SH3BGR84040011995-0.024-0.3756No
187BAMBI665046312080-0.026-0.3801No
188GRB10698008212216-0.029-0.3875No
189MYH11710027312254-0.030-0.3894No
190F2RL1329027912282-0.031-0.3908No
191ARPC51740411 345030012360-0.033-0.3950No
192IGJ117054112363-0.033-0.3950No
193CFLAR2320605 618044012498-0.036-0.4023No
194MUT690017012506-0.036-0.4026No
195CNBP257016112698-0.042-0.4130No
196HNRPH22630040 572067112721-0.042-0.4141No
197SLC16A4245050012885-0.047-0.4229No
198IGF1R336049412897-0.048-0.4234No
199GDI2237006812910-0.048-0.4239No
200CDC42BPA84067112955-0.050-0.4262No
201USP3378004712974-0.050-0.4271No
202FHL16027813001-0.051-0.4284No
203NNT540253 1170471 5550092 676039713012-0.052-0.4288No
204SPARC169008613261-0.060-0.4423No
205LGALS1645019313264-0.061-0.4423No
206GPC3618073513283-0.061-0.4431No
207RERE394027913338-0.064-0.4459No
208PIK3C2A604059313385-0.065-0.4483No
209SP3384033813400-0.066-0.4489No
210FMO3248036913403-0.066-0.4488No
211QKI5220093 613004413451-0.068-0.4512No
212ACSL3314019513515-0.072-0.4545No
213TANK1090020 2060458 237040013601-0.076-0.4590No
214AZIN1345007013674-0.081-0.4628No
215HMGB2264060313760-0.085-0.4672No
216PTPN122030309 6020725 6130746 629060913765-0.085-0.4672No
217PFTK1178018113767-0.086-0.4671No
218FYN2100468 4760520 485068713831-0.091-0.4703No
219SAP18361009213837-0.091-0.4703No
220FRMD4B677073613847-0.092-0.4706No
221COL1A238036413981-0.102-0.4777No
222UBQLN2430397 1170594 407012114001-0.103-0.4785No
223DUSP31240129 684021514115-0.113-0.4844No
224SELENBP1385057514125-0.114-0.4846No
225HMGN34210541 467057714163-0.118-0.4863No
226BIRC3655041114201-0.122-0.4881No
227GALC2260685 4810161 637004014202-0.122-0.4878No
228THRAP1247012114284-0.131-0.4919No
229ABP11980609 6005614350-0.139-0.4951No
230MDH16660358 676073114373-0.141-0.4960No
231LY751990358 459013614406-0.145-0.4974No
232DHX960017 1170095 226001414415-0.148-0.4974No
233ARF4319066114436-0.151-0.4982No
234ACSL4510020 1240041 3190050 4540500 557046314474-0.155-0.4998No
235ACTA260008 123008214488-0.157-0.5001No
236LRRFIP1870259 1050204 276037714509-0.160-0.5008No
237NR1D22360014 454001414538-0.164-0.5020No
238AMD1629012814673-0.188-0.5089No
239UBE4A610052014723-0.199-0.5110No
240TXNL4A4120286 651024214746-0.204-0.5117No
241EVI2B105046514755-0.206-0.5117No
242SLC1A1520372 642005914777-0.210-0.5123No
243DPM11240050 4810019 638039814795-0.213-0.5127No
244COPB1539003714808-0.215-0.5128No
245CLDN104070364 4590059 4920097 5080687 662027014844-0.222-0.5142No
246NPTN620037314909-0.238-0.5171No
247CDS1345039714914-0.239-0.5168No
248YWHAH1660133 281005314963-0.251-0.5188No
249FNDC3A2690097 329004414981-0.255-0.5191No
250ANXA4140031514986-0.256-0.5186No
251TXNDC9158007915000-0.260-0.5187No
252RBL2580446 140067015024-0.267-0.5193No
253ADH1A317042715091-0.288-0.5222No
254PICALM194028015162-0.310-0.5253No
255WEE1339007015186-0.317-0.5258No
256HDGF5130114 5420066 659015215190-0.318-0.5251No
257CREB11500717 2230358 3610600 655060115202-0.323-0.5249No
258SEC22B319027815204-0.324-0.5242No
259KRIT12640500 4230435 473018415213-0.328-0.5238No
260PEX11B651015215262-0.341-0.5256No
261E2F350162 46018015296-0.350-0.5265No
262RRAGA640060315313-0.354-0.5265No
263NRIP1319003915347-0.369-0.5274No
264TOP2B698030915354-0.372-0.5268No
265CLU542007515358-0.372-0.5261No
266DLD4150403 659034115376-0.379-0.5261No
267CITED25670114 513008815380-0.379-0.5253No
268GBAS676027815389-0.383-0.5248No
269ATF22260348 248044115390-0.383-0.5238No
270TNPO1730092 226073515413-0.390-0.5241No
271BRD81170463 2900075 4050397 659033215540-0.432-0.5299No
272PPIB428045015545-0.433-0.5290No
273ARFGEF1676049415585-0.452-0.5301No
274STRN31450093 620068515595-0.454-0.5294No
275ABAT1940520 2690021 569016715629-0.469-0.5301No
276F2R481018015643-0.473-0.5296No
277SCFD13440692 622036915645-0.473-0.5285No
278GTF3A234045115656-0.475-0.5279No
279AP3D1454013815790-0.529-0.5338No
280TFPI1400288 555000815854-0.557-0.5359No
281IGFBP42680309 542044115887-0.571-0.5363No
282ALG84150497 4780500 629056315904-0.578-0.5357No
283RAB11A536007915951-0.603-0.5367Yes
284PPM1B380180 450154 361021515964-0.611-0.5359Yes
285MSH3677057515968-0.612-0.5345Yes
286SMURF2194016115992-0.622-0.5342Yes
287CXCL9157067316020-0.636-0.5341Yes
288HSPA5513067116056-0.650-0.5344Yes
289ASF1A705002016060-0.651-0.5330Yes
290DYNLT3557039816073-0.656-0.5320Yes
291CDK2AP1234015616119-0.677-0.5328Yes
292ANK31500161 2900435 4210154 640010016147-0.695-0.5325Yes
293SRP72399042716161-0.707-0.5315Yes
294PTGES32190440 268052416170-0.709-0.5302Yes
295HNRPK1190348 2060411 2570092 684055116189-0.717-0.5294Yes
296MYH10264067316190-0.718-0.5276Yes
297ACADSB52017016207-0.733-0.5266Yes
298ARHGEF18212027916227-0.749-0.5258Yes
299DYRK1A319018116263-0.763-0.5258Yes
300PEX3276010016274-0.769-0.5245Yes
301PSMC6281002116287-0.776-0.5232Yes
302CALU2680403 3520056 4610348 5720176 613012116292-0.779-0.5215Yes
303HIPK111019316303-0.786-0.5201Yes
304STAT3460040 371034116330-0.801-0.5195Yes
305NCOA3454019516332-0.802-0.5176Yes
306PSMC52760315 655002116383-0.830-0.5182Yes
307PROSC38048416400-0.839-0.5170Yes
308NDUFA55720239 655003516457-0.873-0.5179Yes
309RPS6KA3198070716486-0.889-0.5173Yes
310FPGT539027316512-0.903-0.5164Yes
311CX3CR1169057716525-0.910-0.5148Yes
312YWHAE531043516530-0.911-0.5127Yes
313SLC25A134920072 569072216566-0.939-0.5123Yes
314RECQL2510128 2640136 604068716595-0.955-0.5115Yes
315ARMCX2232016716607-0.959-0.5097Yes
316CRYZ1770110 2360484 481054116677-0.994-0.5110Yes
317RPL22407007016692-1.000-0.5093Yes
318DICER154028616696-1.001-0.5070Yes
319CD9473004116702-1.003-0.5047Yes
320SEC24B460717 306004016731-1.021-0.5037Yes
321AK3L1710060116837-1.087-0.5068Yes
322SH3BGRL206011016891-1.137-0.5069Yes
323PAPPA2589004116904-1.145-0.5047Yes
324CYP1B1476073516923-1.156-0.5028Yes
325NACA520326 589067316940-1.167-0.5008Yes
326PUM1613050016962-1.182-0.4990Yes
327RYK1500338 177007216976-1.208-0.4967Yes
328TOMM70A78011416982-1.212-0.4939Yes
329RBM32360739 570016717042-1.265-0.4940Yes
330ATP6V1B2406052817047-1.268-0.4911Yes
331PTP4A2870154 6040070 6130242 676022417048-1.269-0.4879Yes
332PJA243053717072-1.296-0.4860Yes
333OGT2360131 461033317074-1.298-0.4828Yes
334HMGN1265002617084-1.306-0.4800Yes
335LITAF694067117120-1.347-0.4786Yes
336PRPF40A1190138 219016117179-1.405-0.4783Yes
337COPS51340722 505021517180-1.406-0.4748Yes
338TOMM34569010217209-1.434-0.4728Yes
339CCNG2319009517269-1.502-0.4723Yes
340RAC1481068717312-1.548-0.4707Yes
341COPA257051917319-1.555-0.4672Yes
342PTPRC130402 529014817334-1.574-0.4640Yes
343COPS2306014217384-1.637-0.4627Yes
344CYCS203007217404-1.657-0.4596Yes
345DCTD94016217421-1.671-0.4563Yes
346TXNDC152039817511-1.771-0.4568Yes
347SNRPD3297005017532-1.795-0.4534Yes
348LAMP21230402 198037317534-1.797-0.4490Yes
349FNTA7005917541-1.808-0.4448Yes
350FECH2810605 3120088 492041117552-1.818-0.4408Yes
351GSTO1665060017554-1.820-0.4364Yes
352PKM26520403 7050017558-1.826-0.4320Yes
353ETFA50347 5690040 637004417563-1.830-0.4276Yes
354ELOVL5380017017570-1.836-0.4234Yes
355PPP1R23710278 140072517574-1.838-0.4190Yes
356NXF1157037717625-1.897-0.4170Yes
357SNX22470068 3360364 651006417652-1.934-0.4136Yes
358ATP2A21090075 399027917677-1.987-0.4100Yes
359LASP11690528 2190341 642034117683-2.000-0.4053Yes
360PPID268070717702-2.022-0.4012Yes
361ANP32A510044 1580095 268003717717-2.049-0.3969Yes
362SC4MOL314052417719-2.053-0.3918Yes
363PRDX4380003917730-2.064-0.3873Yes
364TOB1415013817744-2.086-0.3828Yes
365NDUFAF113011317758-2.101-0.3783Yes
366SLC39A6610007217793-2.140-0.3748Yes
367EFHA14540167 461067117826-2.187-0.3711Yes
368VCAM1290045017830-2.190-0.3658Yes
369SHFM1157011417853-2.226-0.3615Yes
370IL6ST589004717857-2.230-0.3561Yes
371UGCG342005317861-2.234-0.3507Yes
372TBL1X640052417890-2.280-0.3466Yes
373H2AFZ147016817943-2.360-0.3436Yes
374ATP6V1A659024217950-2.364-0.3380Yes
375ETF1677007517996-2.447-0.3344Yes
376HNRPDL1050102 1090181 536047118013-2.480-0.3291Yes
377CFDP1700011218015-2.481-0.3230Yes
378RNF6264003518049-2.544-0.3184Yes
379MORF4L2645013318050-2.548-0.3121Yes
380PDIA3212027018064-2.581-0.3064Yes
381IFNGR161057718077-2.617-0.3005Yes
382CREBBP5690035 704005018081-2.625-0.2942Yes
383PPP2CB557059318113-2.711-0.2891Yes
384DDX3X219002018122-2.725-0.2828Yes
385MSN406004418146-2.769-0.2771Yes
386AHCYL154060918151-2.780-0.2704Yes
387PARG5013918158-2.797-0.2638Yes
388MARCKS704045018164-2.808-0.2571Yes
389RB1590033818205-2.912-0.2520Yes
390ANXA5105037318219-2.944-0.2454Yes
391PSMA4456042718265-3.059-0.2403Yes
392HNRPC1570133 361013118269-3.070-0.2328Yes
393PSMD14569059318299-3.166-0.2265Yes
394NARS166072218307-3.192-0.2189Yes
395SFRS2IP730687 150037318315-3.224-0.2113Yes
396IDH1199002118334-3.285-0.2041Yes
397RAB1A237067118364-3.405-0.1972Yes
398SERINC1665002018369-3.432-0.1889Yes
399TOPORS406059218389-3.500-0.1812Yes
400LEPROTL1690011018410-3.591-0.1734Yes
401RALBP1478063218416-3.605-0.1647Yes
402OXCT1665027918430-3.686-0.1562Yes
403ABI1285015218454-3.784-0.1481Yes
404JTB698040018467-3.832-0.1392Yes
405SMAD5570049718468-3.849-0.1296Yes
406PRKAR1A345036918471-3.872-0.1201Yes
407HAT1371008218484-3.945-0.1109Yes
408MAPRE1329003718494-4.031-0.1014Yes
409APLP2361003718519-4.170-0.0923Yes
410RPP14704001418550-4.485-0.0828Yes
411ACBD3276017018557-4.615-0.0716Yes
412AP3S1557004418568-4.776-0.0603Yes
413WSB187056318569-4.783-0.0484Yes
414H3F3B141030018574-4.822-0.0366Yes
415SFRS1236044018577-4.846-0.0246Yes
416ATG1278016718583-4.909-0.0127Yes
417MCL1166067218604-5.7940.0007Yes
Table: GSEA details [plain text format]



Fig 2: FLECHNER_KIDNEY_TRANSPLANT_WELL_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: FLECHNER_KIDNEY_TRANSPLANT_WELL_UP: Random ES distribution   
Gene set null distribution of ES for FLECHNER_KIDNEY_TRANSPLANT_WELL_UP