DatasetSet_03_absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls
#absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls
#absentNotch_versus_wtNotch_repos
Phenotypephenotype_absentNotch_versus_wtNotch.cls#absentNotch_versus_wtNotch_repos
Upregulated in classabsentNotch
GeneSetV$USF_Q6_01
Enrichment Score (ES)0.5534493
Normalized Enrichment Score (NES)1.6306573
Nominal p-value0.0
FDR q-value0.15480782
FWER p-Value0.302
Table: GSEA Results Summary



Fig 1: Enrichment plot: V$USF_Q6_01   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1HNRPDL1050102 1090181 5360471173.1430.0434Yes
2PER13290315762.3730.0737Yes
3PFDN24230156792.3480.1068Yes
4KBTBD223200141282.1650.1347Yes
5HMOX117406871422.0930.1635Yes
6STX64850750 67702781821.9630.1891Yes
7HEXA26303581961.9310.2156Yes
8LAMP124705242031.9200.2424Yes
9KCTD1528107352971.6910.2612Yes
10APEX131905193261.6370.2828Yes
11TCF73800736 53901813731.5660.3024Yes
12AKAP1214507395221.3830.3139Yes
13STMN119907175481.3640.3318Yes
14RNF4459106926311.2780.3453Yes
15JUP25106717021.2300.3589Yes
16GNA1345901027401.2050.3739Yes
17HTF9C3190048 41201327641.1880.3894Yes
18COMMD325102598281.1420.4021Yes
19WBP231701288541.1150.4165Yes
20SGK1400131 24800568731.1000.4310Yes
21PTMA55701489331.0610.4428Yes
22GADD45G25101429361.0580.4576Yes
23GNAS630441 1850373 405015210740.9970.4642Yes
24CSRP2BP4570717 555033310820.9960.4779Yes
25ACACA2490612 268036911510.9610.4878Yes
26AXUD1123005314640.7910.4820Yes
27EIF3S92030068 212004415600.7500.4875Yes
28IGF2R157040215640.7490.4979Yes
29DCTN43390010 555017016270.7160.5046Yes
30WDR11090129 399012116810.6920.5115Yes
31CLN378036817200.6780.5190Yes
32MCOLN1448056317810.6490.5249Yes
33ATF7IP2690176 677002118030.6420.5328Yes
34UBXD3505019318120.6380.5414Yes
35BAX383000818380.6280.5489Yes
36EIF4E1580403 70133 638021519400.5870.5517Yes
37CDH1194073621030.5320.5504Yes
38AATF522057521800.5050.5534Yes
39PPM1A1170301 590027325010.4100.5419No
40NRAS690057725730.3930.5436No
41SLC31A2145057726080.3840.5472No
42HPGD677019227240.3550.5460No
43RAB3IL1380685 542017628640.3230.5430No
44LTBR245034130750.2780.5355No
45SIRT1119073133020.2390.5267No
46KCNE4247010234460.2200.5220No
47SSR1589010037660.1800.5073No
48KLF41850022 3830239 557075038930.1670.5028No
49GNB2235005341800.1420.4893No
50NEUROD2529009744530.1230.4763No
51NPTX1371073646540.1110.4671No
52WEE1339007047070.1070.4658No
53RPL19555059247190.1070.4667No
54HOOK2157034847540.1050.4663No
55NR3C22480324 640009349140.0970.4591No
56SLC16A15043349210.0970.4601No
57ETV170735 2940603 508046349910.0940.4577No
58ANKRD172120402 3850035 640004453900.0770.4372No
59ABR610079 1170609 3610195 567005057770.0650.4172No
60APLN662063260510.0570.4033No
61VLDLR870722 3060047 5340452 655013161320.0550.3997No
62HOXA11190524 542014261400.0550.4001No
63SYT3638001761870.0540.3984No
64TRIB1232043563440.0500.3906No
65HOXA33610632 602035864280.0480.3868No
66FGF5527020464430.0470.3867No
67NPM1473042765010.0460.3843No
68SC5DL665039065650.0450.3815No
69AGRP199008266000.0440.3803No
70ATP6V1H705071768220.0400.3689No
71POGK529031569460.0370.3627No
72CGN5890139 6370167 640053771120.0340.3543No
73SCHIP1456015273350.0300.3427No
74PICALM194028073660.0300.3415No
75NDUFS1265025375960.0260.3294No
76ADAM10378015682590.0150.2938No
77PCDHA10383072586270.0100.2740No
78HOXC5158001787660.0080.2667No
79DNMT3A4050068 481071788940.0060.2599No
80ELOVL3686005089580.0050.2566No
81LIN28659067290030.0050.2542No
82ARTN360670 1170333 150052092010.0020.2436No
83HOXD1061000399479-0.0020.2286No
84SEPT33830022 52900799845-0.0060.2089No
85SNTB22630014 53900359848-0.0060.2089No
86IPO721907469935-0.0080.2044No
87ILF3940722 3190647 65201109953-0.0080.2036No
88UTP14C18500399979-0.0080.2023No
89EIF4G1407044610031-0.0090.1997No
90RHOQ52016110185-0.0120.1916No
91HOXC12527041110437-0.0150.1782No
92UBE2B478049710616-0.0180.1688No
93HNRPD412002110669-0.0190.1663No
94BHLHB3345043810774-0.0200.1609No
95TLL1268031510966-0.0240.1509No
96RAPGEF3505059211414-0.0310.1271No
97HIF1A567060511511-0.0330.1224No
98MPV171190133 4070427 457057711582-0.0350.1191No
99MAX522002112027-0.0430.0957No
100SLC1A7199018112038-0.0430.0957No
101IRS4430341 119045012103-0.0450.0929No
102GLA461036412268-0.0490.0847No
103HOXA7591015212270-0.0490.0853No
104RNF12686071712512-0.0550.0731No
105CNOT42320242 676070612790-0.0630.0590No
106BDNF2940128 352036812822-0.0640.0582No
107HNRPH22630040 572067112847-0.0650.0578No
108TAC17000195 38070612971-0.0690.0521No
109FGF142630390 3520075 677004813250-0.0790.0382No
110HRH3618004013314-0.0820.0359No
111WDR20124037313354-0.0840.0350No
112SOCS53830398 710009313768-0.1030.0141No
113HOXA9610494 4730040 513060113898-0.1110.0086No
114HOXB6421073914087-0.1210.0002No
115HOXB74540706 461035814123-0.1230.0000No
116ATP7B2060711 2470039 3140301 665073514168-0.126-0.0006No
117SFXN22650563 3140095 3830762 387039814261-0.132-0.0037No
118EN15360168 705002514434-0.145-0.0110No
119NEUROD1306061914437-0.145-0.0090No
120TAF6L185005614438-0.145-0.0070No
121SLC26A2236027814551-0.156-0.0109No
122EGLN254008614556-0.156-0.0089No
123RPS2134064714597-0.160-0.0088No
124LZTS2226044014737-0.172-0.0139No
125NFX145050414739-0.172-0.0115No
126PANK3306068714840-0.182-0.0144No
127COPS7A3940458 700002214847-0.182-0.0121No
128DUSP7294030915078-0.207-0.0217No
129EEF1B24850400 613016115140-0.215-0.0219No
130ARL3569072515422-0.254-0.0335No
131GTF2A14120138 4920524 5390110 123039715526-0.274-0.0353No
132NR5A17070715553-0.278-0.0327No
133STC2492060115717-0.306-0.0373No
134EIF5A1500059 5290022 637002615794-0.319-0.0369No
135KRTCAP2522004015806-0.322-0.0329No
136TRIM463520609 459001015889-0.338-0.0326No
137MYST3527050015896-0.339-0.0281No
138MRPL27206013116007-0.363-0.0290No
139ZNF3185890091 613002116172-0.402-0.0322No
140GTF2H12570746 265014816213-0.412-0.0285No
141SMYD4264040316224-0.415-0.0232No
142RGL2174001716278-0.431-0.0200No
143ZFX590040016521-0.498-0.0261No
144SYT13591011016560-0.513-0.0209No
145RANBP1430215 109018016580-0.519-0.0146No
146TGIF23840364 405052016978-0.655-0.0269No
147NCKIPSD294015616993-0.661-0.0183No
148CCAR1319009217272-0.777-0.0224No
149VPS16430064 3390041 686030117503-0.893-0.0223No
150CENTB5569012817513-0.898-0.0101No
151RAMP2686003717773-1.033-0.0095No
152HMGN2314009117854-1.0960.0016No
153WDR23203037218179-1.3810.0035No
154CHD45420059 6130338 638071718210-1.4240.0220No
Table: GSEA details [plain text format]



Fig 2: V$USF_Q6_01   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: V$USF_Q6_01: Random ES distribution   
Gene set null distribution of ES for V$USF_Q6_01