Details for gene set V$USF

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch_repos
Phenotype	phenotype_absentNotch_versus_wtNotch.cls#absentNotch_versus_wtNotch_repos
Upregulated in class	absentNotch
GeneSet	V$USF_02
Enrichment Score (ES)	0.5416249
Normalized Enrichment Score (NES)	1.6399434
Nominal p-value	0.0
FDR q-value	0.2036683
FWER p-Value	0.27

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PER1	3290315	76	2.373	0.0288	Yes
2	PFDN2	4230156	79	2.348	0.0613	Yes
3	DUSP1	6860121	125	2.179	0.0892	Yes
4	KBTBD2	2320014	128	2.165	0.1191	Yes
5	EIF4B	5390563 5270577	143	2.090	0.1474	Yes
6	SNX8	3450315	171	2.000	0.1737	Yes
7	NUDC	4780025	224	1.882	0.1970	Yes
8	GRN	4050239	236	1.839	0.2220	Yes
9	GPX1	4150093	262	1.759	0.2450	Yes
10	UTP14A	6590048	293	1.694	0.2669	Yes
11	RHEBL1	2810576	350	1.591	0.2860	Yes
12	MTCH2	3780603 6620215	368	1.571	0.3069	Yes
13	UBE4B	780008 3610154	453	1.473	0.3228	Yes
14	AKAP12	1450739	522	1.383	0.3383	Yes
15	ALDH6A1	1770746	673	1.249	0.3475	Yes
16	PABPC1	2650180 2690253 6020632 1990270	819	1.149	0.3556	Yes
17	COMMD3	2510259	828	1.142	0.3710	Yes
18	DDX3X	2190020	857	1.115	0.3850	Yes
19	PTMA	5570148	933	1.061	0.3957	Yes
20	NIT1	1230338 3940671	1064	0.999	0.4025	Yes
21	TIMM8A	110279	1173	0.952	0.4098	Yes
22	CD164	3830594	1175	0.949	0.4230	Yes
23	MCAM	5130270 6620577	1223	0.917	0.4332	Yes
24	H2AFY	4730750	1263	0.896	0.4435	Yes
25	ATP6V1C1	2690324 5220528	1311	0.865	0.4529	Yes
26	RAB9A	1690279 3710671	1357	0.845	0.4622	Yes
27	DCTN4	3390010 5550170	1627	0.716	0.4576	Yes
28	CLN3	780368	1720	0.678	0.4620	Yes
29	ATF7IP	2690176 6770021	1803	0.642	0.4665	Yes
30	UBXD3	5050193	1812	0.638	0.4749	Yes
31	BAX	3830008	1838	0.628	0.4823	Yes
32	EIF4E	1580403 70133 6380215	1940	0.587	0.4850	Yes
33	GPR65	3120551	2118	0.525	0.4826	Yes
34	ASNA1	3830041	2121	0.524	0.4898	Yes
35	AATF	5220575	2180	0.505	0.4937	Yes
36	TCF12	3610324 7000156	2257	0.484	0.4963	Yes
37	CYR61	1240408 5290026 4120452 6550008	2276	0.480	0.5020	Yes
38	COMMD8	5890358	2339	0.455	0.5049	Yes
39	TCERG1	2350551 4540397 5220746	2366	0.445	0.5097	Yes
40	TOPORS	4060592	2373	0.443	0.5155	Yes
41	RAI14	770288 1660075	2460	0.421	0.5167	Yes
42	PPM1A	1170301 5900273	2501	0.410	0.5202	Yes
43	SQSTM1	6550056	2548	0.399	0.5233	Yes
44	UBE2L6	60048 1170687	2594	0.388	0.5262	Yes
45	SLC31A2	1450577	2608	0.384	0.5309	Yes
46	TNRC15	6760746	2616	0.382	0.5358	Yes
47	EPC1	1570050 5290095 6900193	2623	0.380	0.5407	Yes
48	GABARAP	1450286	2700	0.360	0.5416	Yes
49	RAB3IL1	380685 5420176	2864	0.323	0.5373	No
50	CDKN2C	5050750 5130148	3036	0.286	0.5320	No
51	SIRT1	1190731	3302	0.239	0.5209	No
52	SYNPO2L	5390719	3384	0.228	0.5197	No
53	DNAJB5	2900215	3406	0.226	0.5217	No
54	BLNK	70288 6590092	3432	0.222	0.5234	No
55	KCNE4	2470102	3446	0.220	0.5257	No
56	LAMC2	450692 2680041 4200059 4670148	3601	0.199	0.5202	No
57	RUNX1	3840711	3747	0.183	0.5148	No
58	SSR1	5890100	3766	0.180	0.5164	No
59	SLC23A2	6660722	3933	0.164	0.5096	No
60	GNB2	2350053	4180	0.142	0.4983	No
61	TOP3A	7000435	4362	0.129	0.4902	No
62	SMCR8	730653	4499	0.120	0.4845	No
63	GGN	1410528 4210082 5290170	4605	0.113	0.4804	No
64	NPTX1	3710736	4654	0.111	0.4793	No
65	TGFB2	4920292	4739	0.105	0.4762	No
66	ETV1	70735 2940603 5080463	4991	0.094	0.4639	No
67	ZIC3	380020	5692	0.068	0.4269	No
68	APLN	6620632	6051	0.057	0.4083	No
69	VLDLR	870722 3060047 5340452 6550131	6132	0.055	0.4047	No
70	TYR	5690139	6221	0.053	0.4007	No
71	FOXD3	6550156	6234	0.053	0.4008	No
72	SUMF1	730050	6251	0.053	0.4006	No
73	CRLF1	3520092	6400	0.049	0.3933	No
74	NPM1	4730427	6501	0.046	0.3885	No
75	UMPS	2340541 4730438	6512	0.046	0.3886	No
76	PIP5K1A	4560672	6681	0.042	0.3801	No
77	LHFP	3440368	6914	0.038	0.3680	No
78	POGK	5290315	6946	0.037	0.3668	No
79	CPT1A	6350093	7251	0.031	0.3508	No
80	PICALM	1940280	7366	0.030	0.3450	No
81	FMR1	5050075	7485	0.028	0.3390	No
82	HOXA11	6980133	7781	0.023	0.3233	No
83	CLCN5	4200390	7785	0.023	0.3235	No
84	TOM1L2	4810465	8120	0.018	0.3056	No
85	MTHFD1	5900398 6520427	8184	0.017	0.3024	No
86	PPARGC1A	4670040	8383	0.014	0.2919	No
87	SLC17A2	870593 2810035	8602	0.011	0.2802	No
88	CBX5	3830072 6290167	8613	0.010	0.2798	No
89	UBXD2	4280092	8672	0.010	0.2768	No
90	HOXC5	1580017	8766	0.008	0.2718	No
91	DNMT3A	4050068 4810717	8894	0.006	0.2650	No
92	LIN28	6590672	9003	0.005	0.2593	No
93	CAPN6	1740168	9022	0.005	0.2583	No
94	FZD6	360288	9067	0.004	0.2560	No
95	XPO1	540707	9072	0.004	0.2559	No
96	PFKFB1	2370128	9120	0.004	0.2534	No
97	LRP5	2100397 3170484	9158	0.003	0.2514	No
98	AP1S2	780279 4280707	9161	0.003	0.2513	No
99	HOXB5	2900538	9272	0.001	0.2454	No
100	HOXD10	6100039	9479	-0.002	0.2342	No
101	CARKL	6020068	9569	-0.003	0.2294	No
102	EIF3S10	1190079 3840176	9662	-0.004	0.2245	No
103	BMP6	2100128	9712	-0.005	0.2219	No
104	ILF3	940722 3190647 6520110	9953	-0.008	0.2090	No
105	PIK3R1	4730671	9986	-0.008	0.2074	No
106	MAT2A	4070026 4730079 6020280	10116	-0.010	0.2005	No
107	RHOQ	520161	10185	-0.012	0.1970	No
108	BTBD14B	3520601 4280162	10403	-0.015	0.1854	No
109	CALR	510446	10559	-0.017	0.1773	No
110	UBE2B	4780497	10616	-0.018	0.1745	No
111	LAMA3	1190131 5290239	10660	-0.019	0.1724	No
112	HNRPD	4120021	10669	-0.019	0.1722	No
113	C4A	360286 3830100 5220750 6420132	10821	-0.021	0.1643	No
114	CREB5	2320368	10840	-0.021	0.1637	No
115	VNN1	3940400	11051	-0.025	0.1526	No
116	PLS3	3290082	11495	-0.033	0.1290	No
117	NCOA6	1780333 6450110	11496	-0.033	0.1295	No
118	ELAVL3	2850014	11765	-0.038	0.1155	No
119	OMG	6760066	12007	-0.043	0.1030	No
120	MAX	5220021	12027	-0.043	0.1026	No
121	SLC1A7	1990181	12038	-0.043	0.1027	No
122	GZMK	1410148	12046	-0.044	0.1029	No
123	IRS4	430341 1190450	12103	-0.045	0.1005	No
124	GLA	4610364	12268	-0.049	0.0923	No
125	SLC12A6	610278 1980035 5340671	12705	-0.060	0.0694	No
126	BDNF	2940128 3520368	12822	-0.064	0.0640	No
127	SEC23IP	4540484 6200047	12837	-0.064	0.0642	No
128	HNRPH2	2630040 5720671	12847	-0.065	0.0646	No
129	CTNS	4480048	12946	-0.068	0.0602	No
130	TAC1	7000195 380706	12971	-0.069	0.0599	No
131	DVL2	6110162	12999	-0.070	0.0594	No
132	RNF128	1230300 5670273	13167	-0.077	0.0514	No
133	FGF14	2630390 3520075 6770048	13250	-0.079	0.0480	No
134	STK16	1740154	13572	-0.093	0.0319	No
135	SUPV3L1	1170072	13755	-0.102	0.0235	No
136	NRIP3	1340372	13833	-0.106	0.0208	No
137	SEMA3A	1780064	14025	-0.117	0.0120	No
138	COPZ1	6940100	14122	-0.123	0.0086	No
139	HOXB7	4540706 4610358	14123	-0.123	0.0103	No
140	RPS28	3830221	14126	-0.124	0.0119	No
141	MDM1	510528 1780280 2680152 2690181 3060025 3120487 4210601 4540037 4610142 5290110 6400433 6480743	14171	-0.127	0.0112	No
142	SOX10	6200538	14283	-0.134	0.0071	No
143	RFC1	1190673	14362	-0.140	0.0048	No
144	NEUROD1	3060619	14437	-0.145	0.0028	No
145	TAF6L	1850056	14438	-0.145	0.0048	No
146	TESK2	6520524	14461	-0.147	0.0057	No
147	SLC39A5	2900100 4610440	14482	-0.149	0.0066	No
148	EGLN2	540086	14556	-0.156	0.0048	No
149	RPS2	1340647	14597	-0.160	0.0049	No
150	FEN1	1770541	14598	-0.160	0.0071	No
151	DUSP8	6650039	14730	-0.171	0.0024	No
152	NFX1	450504	14739	-0.172	0.0044	No
153	ARMET	5130670	14800	-0.178	0.0036	No
154	HNRPA1	4670398 5050687	14863	-0.184	0.0028	No
155	DUSP7	2940309	15078	-0.207	-0.0060	No
156	ATP6V1A	6590242	15291	-0.234	-0.0142	No
157	ISGF3G	3190131 7100142	15323	-0.240	-0.0125	No
158	GTF2A1	4120138 4920524 5390110 1230397	15526	-0.274	-0.0197	No
159	MAP4K1	4060692	15584	-0.284	-0.0188	No
160	DDIT3	780373	15630	-0.290	-0.0173	No
161	STC2	4920601	15717	-0.306	-0.0177	No
162	UROD	2470494	15772	-0.315	-0.0162	No
163	DHX35	1230440	15805	-0.322	-0.0135	No
164	BRDT	3940102	15913	-0.342	-0.0145	No
165	ARPP-19	5700025	15945	-0.350	-0.0114	No
166	MRPL27	2060131	16007	-0.363	-0.0096	No
167	GTF2H1	2570746 2650148	16213	-0.412	-0.0150	No
168	HIVEP1	3850632	16240	-0.420	-0.0106	No
169	NDUFA7	5900722	16396	-0.467	-0.0125	No
170	PRPS1	6350129	16555	-0.513	-0.0140	No
171	COQ4	1660551	16783	-0.585	-0.0182	No
172	ATF4	730441 1740195	16803	-0.593	-0.0110	No
173	CCAR1	3190092	17272	-0.777	-0.0255	No
174	VPS16	430064 3390041 6860301	17503	-0.893	-0.0256	No
175	OPRS1	6130128 6290717	17771	-1.032	-0.0258	No
176	ZFYVE26	6860152	17806	-1.060	-0.0129	No
177	SESN3	110687	18034	-1.234	-0.0081	No
178	PTGES2	4210097	18208	-1.422	0.0023	No
179	CHD4	5420059 6130338 6380717	18210	-1.424	0.0220	No