Details for gene set V$USF

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch_repos
Phenotype	phenotype_absentNotch_versus_wtNotch.cls#absentNotch_versus_wtNotch_repos
Upregulated in class	absentNotch
GeneSet	V$USF_01
Enrichment Score (ES)	0.57424
Normalized Enrichment Score (NES)	1.7477224
Nominal p-value	0.0
FDR q-value	0.044380162
FWER p-Value	0.034

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PER1	3290315	76	2.373	0.0228	Yes
2	PFDN2	4230156	79	2.348	0.0493	Yes
3	DUSP1	6860121	125	2.179	0.0715	Yes
4	KBTBD2	2320014	128	2.165	0.0960	Yes
5	HMOX1	1740687	142	2.093	0.1190	Yes
6	EIF4B	5390563 5270577	143	2.090	0.1427	Yes
7	STX6	4850750 6770278	182	1.963	0.1628	Yes
8	LAMP1	2470524	203	1.920	0.1835	Yes
9	NUDC	4780025	224	1.882	0.2038	Yes
10	GPX1	4150093	262	1.759	0.2217	Yes
11	ATIC	4010593 6380463	324	1.642	0.2370	Yes
12	APEX1	3190519	326	1.637	0.2555	Yes
13	MTCH2	3780603 6620215	368	1.571	0.2711	Yes
14	BOK	1170373 5860446	374	1.565	0.2885	Yes
15	U2AF2	450600 4670128 5420292	420	1.513	0.3032	Yes
16	UBE4B	780008 3610154	453	1.473	0.3182	Yes
17	OSGEP	5700239	458	1.465	0.3346	Yes
18	AKAP12	1450739	522	1.383	0.3468	Yes
19	STMN1	1990717	548	1.364	0.3610	Yes
20	ALDH6A1	1770746	673	1.249	0.3684	Yes
21	GNA13	4590102	740	1.205	0.3785	Yes
22	HTF9C	3190048 4120132	764	1.188	0.3907	Yes
23	COMMD3	2510259	828	1.142	0.4002	Yes
24	DDX3X	2190020	857	1.115	0.4113	Yes
25	PTMA	5570148	933	1.061	0.4193	Yes
26	SLC38A2	1470242 3800026	1029	1.006	0.4255	Yes
27	GSK3B	5360348	1055	1.000	0.4355	Yes
28	ALG1	2570112	1059	0.999	0.4466	Yes
29	NIT1	1230338 3940671	1064	0.999	0.4577	Yes
30	GNAS	630441 1850373 4050152	1074	0.997	0.4686	Yes
31	CSRP2BP	4570717 5550333	1082	0.996	0.4795	Yes
32	UTX	2900017 6770452	1170	0.954	0.4856	Yes
33	TIMM8A	110279	1173	0.952	0.4962	Yes
34	CD164	3830594	1175	0.949	0.5069	Yes
35	RAB24	520601 4540739	1527	0.761	0.4965	Yes
36	IGF2R	1570402	1564	0.749	0.5031	Yes
37	DCTN4	3390010 5550170	1627	0.716	0.5078	Yes
38	HPS3	6650348	1635	0.711	0.5155	Yes
39	CLN3	780368	1720	0.678	0.5186	Yes
40	MCOLN1	4480563	1781	0.649	0.5227	Yes
41	RPL13A	2680519 5700142	1797	0.644	0.5292	Yes
42	ATF7IP	2690176 6770021	1803	0.642	0.5362	Yes
43	UBXD3	5050193	1812	0.638	0.5430	Yes
44	BAX	3830008	1838	0.628	0.5488	Yes
45	EIF4E	1580403 70133 6380215	1940	0.587	0.5499	Yes
46	RPA1	360452	2010	0.563	0.5526	Yes
47	RBBP4	6650528	2120	0.524	0.5526	Yes
48	AATF	5220575	2180	0.505	0.5551	Yes
49	BRD2	1450300 5340484 6100605	2191	0.502	0.5603	Yes
50	COMMD8	5890358	2339	0.455	0.5575	Yes
51	TOPORS	4060592	2373	0.443	0.5607	Yes
52	RAI14	770288 1660075	2460	0.421	0.5608	Yes
53	PPM1A	1170301 5900273	2501	0.410	0.5633	Yes
54	MCM2	5050139	2607	0.385	0.5620	Yes
55	SLC31A2	1450577	2608	0.384	0.5663	Yes
56	TNRC15	6760746	2616	0.382	0.5703	Yes
57	EPC1	1570050 5290095 6900193	2623	0.380	0.5742	Yes
58	GABARAP	1450286	2700	0.360	0.5742	No
59	RAB3IL1	380685 5420176	2864	0.323	0.5690	No
60	SIRT1	1190731	3302	0.239	0.5480	No
61	SSR1	5890100	3766	0.180	0.5250	No
62	HTATIP	5360739	4094	0.149	0.5089	No
63	GNB2	2350053	4180	0.142	0.5059	No
64	GGN	1410528 4210082 5290170	4605	0.113	0.4842	No
65	NPTX1	3710736	4654	0.111	0.4829	No
66	CUL5	450142	4818	0.101	0.4752	No
67	ETV1	70735 2940603 5080463	4991	0.094	0.4669	No
68	HOXA1	1190524 5420142	6140	0.055	0.4053	No
69	SYT3	6380017	6187	0.054	0.4034	No
70	FSHR	610041 7040121	6196	0.054	0.4036	No
71	FOXD3	6550156	6234	0.053	0.4022	No
72	SUMF1	730050	6251	0.053	0.4019	No
73	NPM1	4730427	6501	0.046	0.3889	No
74	SC5DL	6650390	6565	0.045	0.3860	No
75	SET	6650286	6630	0.043	0.3830	No
76	POGK	5290315	6946	0.037	0.3664	No
77	CGN	5890139 6370167 6400537	7112	0.034	0.3578	No
78	CPT1A	6350093	7251	0.031	0.3507	No
79	PICALM	1940280	7366	0.030	0.3448	No
80	AKAP1	110148 1740735 2260019 7000563	7391	0.029	0.3439	No
81	FMR1	5050075	7485	0.028	0.3391	No
82	NDUFS1	2650253	7596	0.026	0.3335	No
83	UTY	5890441	7631	0.025	0.3319	No
84	HOXA11	6980133	7781	0.023	0.3241	No
85	TOM1L2	4810465	8120	0.018	0.3059	No
86	SNX5	1570021 6860609	8216	0.016	0.3010	No
87	ADAM10	3780156	8259	0.015	0.2989	No
88	TRIM37	5270091	8302	0.015	0.2968	No
89	PCDHA10	3830725	8627	0.010	0.2793	No
90	HOXC5	1580017	8766	0.008	0.2719	No
91	DNMT3A	4050068 4810717	8894	0.006	0.2651	No
92	AKAP10	2630504 5910577	9063	0.004	0.2560	No
93	XPO1	540707	9072	0.004	0.2557	No
94	AP1S2	780279 4280707	9161	0.003	0.2509	No
95	HOXB5	2900538	9272	0.001	0.2450	No
96	OPRD1	4280138	9395	-0.001	0.2384	No
97	HOXD10	6100039	9479	-0.002	0.2339	No
98	EIF3S10	1190079 3840176	9662	-0.004	0.2241	No
99	SEPT3	3830022 5290079	9845	-0.006	0.2143	No
100	ODC1	5670168	9891	-0.007	0.2119	No
101	ILF3	940722 3190647 6520110	9953	-0.008	0.2087	No
102	EIF4G1	4070446	10031	-0.009	0.2046	No
103	KIAA1715	1190551	10602	-0.018	0.1739	No
104	UBE2B	4780497	10616	-0.018	0.1734	No
105	HNRPD	4120021	10669	-0.019	0.1708	No
106	BHLHB3	3450438	10774	-0.020	0.1654	No
107	ARPC5	1740411 3450300	11214	-0.027	0.1419	No
108	ELAVL3	2850014	11765	-0.038	0.1125	No
109	RNF146	1660735	11952	-0.042	0.1029	No
110	MAX	5220021	12027	-0.043	0.0994	No
111	SLC1A7	1990181	12038	-0.043	0.0993	No
112	IRS4	430341 1190450	12103	-0.045	0.0963	No
113	PHC3	4920332	12249	-0.048	0.0890	No
114	GLA	4610364	12268	-0.049	0.0886	No
115	HOXA7	5910152	12270	-0.049	0.0891	No
116	SLC12A6	610278 1980035 5340671	12705	-0.060	0.0663	No
117	PPP1R3C	2640170	12767	-0.062	0.0637	No
118	RARG	6760136	12811	-0.064	0.0620	No
119	BDNF	2940128 3520368	12822	-0.064	0.0622	No
120	HNRPH2	2630040 5720671	12847	-0.065	0.0617	No
121	BMP4	380113	12965	-0.069	0.0561	No
122	DVL2	6110162	12999	-0.070	0.0551	No
123	RAD9A	110300 1940632 3990390 6040014	13348	-0.084	0.0372	No
124	USP15	610592 3520504	13408	-0.086	0.0350	No
125	NRIP3	1340372	13833	-0.106	0.0132	No
126	HOXA9	610494 4730040 5130601	13898	-0.111	0.0110	No
127	RBBP6	2320129	13909	-0.111	0.0117	No
128	SLC36A1	5080242	13996	-0.116	0.0083	No
129	JMJD2C	3290341	14056	-0.119	0.0065	No
130	ESR2	6220138	14084	-0.121	0.0064	No
131	COPZ1	6940100	14122	-0.123	0.0058	No
132	HOXB7	4540706 4610358	14123	-0.123	0.0072	No
133	POLR3C	6940546	14311	-0.136	-0.0014	No
134	TOM1	940398 2190053	14380	-0.141	-0.0035	No
135	NEUROD1	3060619	14437	-0.145	-0.0049	No
136	TAF6L	1850056	14438	-0.145	-0.0033	No
137	TESK2	6520524	14461	-0.147	-0.0028	No
138	SLC26A2	2360278	14551	-0.156	-0.0059	No
139	FEN1	1770541	14598	-0.160	-0.0065	No
140	GATA5	430465	14714	-0.169	-0.0109	No
141	NFX1	450504	14739	-0.172	-0.0102	No
142	MORF4L2	6450133	14765	-0.175	-0.0096	No
143	ARMET	5130670	14800	-0.178	-0.0094	No
144	DUSP7	2940309	15078	-0.207	-0.0221	No
145	EEF1B2	4850400 6130161	15140	-0.215	-0.0229	No
146	SCYL1	5050717	15252	-0.230	-0.0264	No
147	DIRC2	2810494	15254	-0.230	-0.0238	No
148	ATP6V1A	6590242	15291	-0.234	-0.0231	No
149	RGL1	1500097 6900450	15294	-0.235	-0.0205	No
150	ISGF3G	3190131 7100142	15323	-0.240	-0.0193	No
151	GTF2A1	4120138 4920524 5390110 1230397	15526	-0.274	-0.0272	No
152	SGOL1	1980075 5220092 6020711	15623	-0.288	-0.0291	No
153	DHX35	1230440	15805	-0.322	-0.0353	No
154	MYST3	5270500	15896	-0.339	-0.0363	No
155	BRDT	3940102	15913	-0.342	-0.0333	No
156	MRPL27	2060131	16007	-0.363	-0.0342	No
157	ZNF318	5890091 6130021	16172	-0.402	-0.0386	No
158	TSC1	1850672	16201	-0.410	-0.0354	No
159	GTF2H1	2570746 2650148	16213	-0.412	-0.0314	No
160	SMYD4	2640403	16224	-0.415	-0.0272	No
161	VPS33A	780113	16335	-0.449	-0.0281	No
162	PRPS1	6350129	16555	-0.513	-0.0341	No
163	RANBP1	430215 1090180	16580	-0.519	-0.0296	No
164	ATF4	730441 1740195	16803	-0.593	-0.0349	No
165	TFRC	4050551	16889	-0.618	-0.0325	No
166	CCAR1	3190092	17272	-0.777	-0.0444	No
167	ZCCHC7	6510592	17316	-0.793	-0.0377	No
168	HSPBAP1	4060022	17428	-0.849	-0.0341	No
169	VPS16	430064 3390041 6860301	17503	-0.893	-0.0280	No
170	PLCG2	5720008	17515	-0.899	-0.0184	No
171	TEF	1050050 3120397 4060487	17737	-1.008	-0.0190	No
172	OPRS1	6130128 6290717	17771	-1.032	-0.0091	No
173	ZFYVE26	6860152	17806	-1.060	0.0011	No
174	HMGN2	3140091	17854	-1.096	0.0110	No
175	HOXB4	540131	18050	-1.246	0.0145	No
176	CHD4	5420059 6130338 6380717	18210	-1.424	0.0220	No