Details for gene set V$SP1_Q2

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch_repos
Phenotype	phenotype_absentNotch_versus_wtNotch.cls#absentNotch_versus_wtNotch_repos
Upregulated in class	wtNotch
GeneSet	V$SP1_Q2_01
Enrichment Score (ES)	-0.42005542
Normalized Enrichment Score (NES)	-1.3236885
Nominal p-value	0.012376238
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PER1	3290315	76	2.373	0.0280	No
2	KLF7	50390	241	1.820	0.0437	No
3	BCL11B	2680673	462	1.464	0.0516	No
4	ZFP36	2030605	675	1.248	0.0570	No
5	ACLY	1740609	799	1.163	0.0660	No
6	RAP1GDS1	50528	902	1.086	0.0752	No
7	ETV5	110017	949	1.049	0.0869	No
8	FAF1	2450717 2510121 4730156	1047	1.001	0.0952	No
9	GRB2	6650398	1153	0.960	0.1025	No
10	SNAG1	2760092	1288	0.879	0.1071	No
11	BCL6	940100	1780	0.649	0.0893	No
12	TPM4	2100059 3850072 4920162	1802	0.642	0.0968	No
13	ANP32A	510044 1580095 2680037	1825	0.634	0.1042	No
14	PIP5K2B	6520156 6620541	1870	0.617	0.1101	No
15	BMI1	3830026 2630204	1980	0.573	0.1120	No
16	LASP1	1690528 2190341 6420341	1995	0.569	0.1189	No
17	HIPK1	110193	1996	0.569	0.1266	No
18	HS2ST1	3170088	2061	0.547	0.1306	No
19	ARFIP1	3130601	2123	0.524	0.1343	No
20	LDB1	5270601	2154	0.512	0.1396	No
21	NFE2L1	6130053	2244	0.489	0.1414	No
22	TCF12	3610324 7000156	2257	0.484	0.1473	No
23	ARPC4	2900056	2382	0.441	0.1466	No
24	THRA	6770341 110164 1990600	2433	0.427	0.1496	No
25	HYAL2	1500152	2695	0.361	0.1404	No
26	GABARAP	1450286	2700	0.360	0.1450	No
27	SH3BP5	7100408	2869	0.322	0.1403	No
28	FUT8	1340068 2340056	2878	0.320	0.1441	No
29	CLPTM1	670181	2932	0.307	0.1454	No
30	KCNN2	990025 3520524	3192	0.258	0.1349	No
31	TBX3	2570672	3476	0.214	0.1224	No
32	CLSTN1	6020019	3511	0.210	0.1234	No
33	SCARF2	5290184	3579	0.202	0.1225	No
34	BCL7C	460050	3994	0.159	0.1022	No
35	KLF16	4590725	4100	0.149	0.0985	No
36	ASCL2	1400273	4104	0.148	0.1004	No
37	PIAS3	50204 240739 4060524	4345	0.131	0.0891	No
38	RNF24	4230280 6100070 6620739	4456	0.123	0.0848	No
39	GGN	1410528 4210082 5290170	4605	0.113	0.0783	No
40	CAMK2G	630097	4725	0.106	0.0733	No
41	HSD11B2	5900053	5076	0.090	0.0556	No
42	DUSP15	1850044 6960196	5106	0.089	0.0552	No
43	GPR3	2970452	5205	0.085	0.0510	No
44	BCL6B	60047	5469	0.075	0.0378	No
45	EDG8	1990441	5595	0.071	0.0320	No
46	LOXL4	6520095	5618	0.070	0.0317	No
47	CDH3	5390112 6860603	5756	0.066	0.0252	No
48	KLF13	4670563	5870	0.062	0.0199	No
49	TSNAXIP1	1770270 6180577	5890	0.062	0.0197	No
50	APLP2	3610037	5901	0.061	0.0200	No
51	PAK1	4540315	5902	0.061	0.0208	No
52	NXPH4	3830500	6211	0.053	0.0048	No
53	PTCH2	2900092	6245	0.053	0.0037	No
54	SP3	3840338	6387	0.049	-0.0032	No
55	FGF5	5270204	6443	0.047	-0.0056	No
56	KCNB1	3610035	6691	0.042	-0.0184	No
57	JUB	5860711 5900500	6711	0.042	-0.0189	No
58	SOX2	630487 2230491	7148	0.033	-0.0421	No
59	ACCN2	6450465	7301	0.031	-0.0499	No
60	TIGD4	1780114	7396	0.029	-0.0546	No
61	KCNMA1	1450402	7589	0.026	-0.0647	No
62	NLK	2030010 2450041	7808	0.022	-0.0762	No
63	ERBB3	5890372	7817	0.022	-0.0763	No
64	ADRB1	6860292	8090	0.018	-0.0908	No
65	NUMBL	6130360 6200333	8195	0.016	-0.0963	No
66	KCNIP2	60088 1780324	8257	0.015	-0.0994	No
67	ADAM10	3780156	8259	0.015	-0.0992	No
68	DNMT3A	4050068 4810717	8894	0.006	-0.1335	No
69	NXPH3	5860292	9152	0.003	-0.1474	No
70	DES	1450341	9284	0.001	-0.1545	No
71	GRIN2A	6550538	9404	-0.001	-0.1609	No
72	CACNA1A	6220164	9520	-0.002	-0.1671	No
73	NOL4	5050446 5360519	9748	-0.005	-0.1794	No
74	CRY1	6770039	9973	-0.008	-0.1914	No
75	PTHLH	5290739	10160	-0.011	-0.2014	No
76	FEV	840369 5860139	10172	-0.011	-0.2018	No
77	AKT2	3850541 3870519	10409	-0.015	-0.2144	No
78	PTPN2	130315	10503	-0.016	-0.2192	No
79	OSBPL9	2570373	10511	-0.017	-0.2194	No
80	RAB26	5910025	10519	-0.017	-0.2195	No
81	PTPRJ	4010707	10676	-0.019	-0.2277	No
82	BHLHB3	3450438	10774	-0.020	-0.2327	No
83	CHAT	6840603	10949	-0.023	-0.2419	No
84	NTF5	6110239	11201	-0.027	-0.2551	No
85	CLDN11	670338	11280	-0.029	-0.2589	No
86	FSTL5	770280	11336	-0.030	-0.2615	No
87	TIMELESS	3710315	11391	-0.031	-0.2640	No
88	GSC	1580685	11436	-0.031	-0.2660	No
89	PHOX2A	6650121	11472	-0.032	-0.2675	No
90	NCOA6	1780333 6450110	11496	-0.033	-0.2683	No
91	OSBP2	6510368	11536	-0.034	-0.2699	No
92	POLR2I	4060400	11658	-0.036	-0.2760	No
93	MDS1	6400072	11890	-0.040	-0.2880	No
94	SLC18A3	3060035	11942	-0.042	-0.2902	No
95	NR2F2	3170609 3310577	12079	-0.045	-0.2970	No
96	FZD2	6480154	12152	-0.046	-0.3002	No
97	TADA3L	4210070 5720088 6660333	12206	-0.047	-0.3025	No
98	FGF11	840292	12271	-0.049	-0.3053	No
99	TBX2	1990563	12335	-0.051	-0.3080	No
100	RANBP10	2340184	12660	-0.059	-0.3248	No
101	ONECUT1	6450136	12728	-0.061	-0.3276	No
102	TITF1	3390554 4540292	12754	-0.062	-0.3281	No
103	BDNF	2940128 3520368	12822	-0.064	-0.3309	No
104	SIX4	6760022	12830	-0.064	-0.3304	No
105	HCN4	1050026	12854	-0.065	-0.3308	No
106	FGF12	1740446 2360037	12880	-0.066	-0.3312	No
107	EFNB3	5570594	13115	-0.075	-0.3429	No
108	CDH2	520435 2450451 2760025 6650477	13177	-0.077	-0.3452	No
109	ENAH	1690292 5700300	13222	-0.078	-0.3465	No
110	SLC35F5	2360369	13245	-0.079	-0.3466	No
111	CDH24	6980592	13284	-0.081	-0.3476	No
112	HRH3	6180040	13314	-0.082	-0.3480	No
113	DLX3	3190497	13337	-0.084	-0.3481	No
114	ARHGEF19	940102	13344	-0.084	-0.3473	No
115	CREB1	1500717 2230358 3610600 6550601	13420	-0.087	-0.3502	No
116	WNT1	4780148	13613	-0.095	-0.3593	No
117	SLITRK5	6590292	13614	-0.095	-0.3580	No
118	TAL1	7040239	13685	-0.098	-0.3605	No
119	TRIM28	380292	13934	-0.113	-0.3724	No
120	MAP3K11	7000039	13987	-0.115	-0.3737	No
121	RAB2B	6200091	14012	-0.116	-0.3734	No
122	HOXB7	4540706 4610358	14123	-0.123	-0.3777	No
123	HCFC1R1	6350500	14266	-0.133	-0.3836	No
124	CBLN1	5670358	14392	-0.142	-0.3885	No
125	EN1	5360168 7050025	14434	-0.145	-0.3888	No
126	EGLN2	540086	14556	-0.156	-0.3932	No
127	PPRC1	1740441	14616	-0.161	-0.3942	No
128	ERG	50154 1770739	14665	-0.166	-0.3946	No
129	SPAG9	580497 2510180 4210685	14719	-0.170	-0.3952	No
130	CACNA1D	1740315 4730731	14960	-0.194	-0.4056	No
131	EIF2C1	6900551	14965	-0.194	-0.4032	No
132	ACE	1780161 4920315	15041	-0.203	-0.4045	No
133	WNT5A	840685 3120152	15104	-0.211	-0.4050	No
134	ATP2A2	1090075 3990279	15131	-0.214	-0.4035	No
135	FBXO34	4010671 5700647 6450026	15133	-0.215	-0.4006	No
136	PHLDA3	510398	15142	-0.216	-0.3982	No
137	NTRK3	4050687 4070167 4610026 6100484	15400	-0.251	-0.4087	No
138	ADCK1	6620707	15424	-0.254	-0.4065	No
139	SNX2	2470068 3360364 6510064	15672	-0.298	-0.4159	Yes
140	RELB	1400048	15750	-0.311	-0.4158	Yes
141	ASB7	520242 2450088 3990563 4280538	15762	-0.313	-0.4122	Yes
142	CDK5R1	3870161	15770	-0.314	-0.4083	Yes
143	NFAT5	2510411 5890195 6550152	15785	-0.317	-0.4048	Yes
144	MAP4K2	4200037	15850	-0.331	-0.4038	Yes
145	CHKA	510324	15898	-0.340	-0.4017	Yes
146	PAX2	6040270 7000133	16006	-0.363	-0.4026	Yes
147	CORO1C	4570397	16012	-0.364	-0.3980	Yes
148	IRF2BP1	3170019	16258	-0.426	-0.4055	Yes
149	GGA1	70402 380168	16277	-0.431	-0.4007	Yes
150	CGGBP1	4810053	16403	-0.468	-0.4011	Yes
151	LYL1	2900242	16430	-0.476	-0.3961	Yes
152	SESN2	2370019	16670	-0.550	-0.4016	Yes
153	HAP1	1240010 4230079 6980195	16672	-0.551	-0.3942	Yes
154	SIPA1	5220687	16698	-0.559	-0.3880	Yes
155	FBXO3	6760673 6860131	16753	-0.575	-0.3831	Yes
156	GAS7	2120358 6450494	16924	-0.631	-0.3838	Yes
157	GFRA1	3610152	17009	-0.668	-0.3793	Yes
158	RELA	3830075	17087	-0.699	-0.3741	Yes
159	BAD	2120148	17103	-0.707	-0.3653	Yes
160	SMARCD1	3060193 3850184 6400369	17317	-0.794	-0.3661	Yes
161	MXD4	4810113	17706	-0.999	-0.3737	Yes
162	TEF	1050050 3120397 4060487	17737	-1.008	-0.3616	Yes
163	CRYAB	4810619	17755	-1.021	-0.3488	Yes
164	DDX6	2630025 6770408	17886	-1.117	-0.3407	Yes
165	VAMP2	2100100	17926	-1.144	-0.3273	Yes
166	UPF2	4810471	17961	-1.173	-0.3133	Yes
167	HSPB2	1990110	18051	-1.246	-0.3013	Yes
168	RHOG	6760575	18173	-1.375	-0.2892	Yes
169	OAZ2	2810110	18190	-1.396	-0.2712	Yes
170	FBXL19	4570039	18205	-1.420	-0.2527	Yes
171	CAMKK1	6370324	18219	-1.447	-0.2339	Yes
172	BCL3	3990440	18315	-1.592	-0.2175	Yes
173	SRR	1190465 3800494	18352	-1.663	-0.1969	Yes
174	SEP15	1780451 2060450 5890451	18376	-1.724	-0.1749	Yes
175	EFEMP2	5550086	18462	-1.925	-0.1534	Yes
176	TMEM24	5860039	18469	-1.952	-0.1273	Yes
177	PIK4CB	510450 1780452	18500	-2.061	-0.1011	Yes
178	PAK4	1690152	18548	-2.254	-0.0731	Yes
179	NOTCH3	3060603	18565	-2.482	-0.0404	Yes
180	BCL9L	6940053	18607	-3.187	0.0005	Yes