Details for gene set V$PAX6

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch_repos
Phenotype	phenotype_absentNotch_versus_wtNotch.cls#absentNotch_versus_wtNotch_repos
Upregulated in class	wtNotch
GeneSet	V$PAX6_01
Enrichment Score (ES)	-0.44260737
Normalized Enrichment Score (NES)	-1.2024958
Nominal p-value	0.11973392
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	NFYB	1850053	313	1.663	0.0440	No
2	SERTAD4	130593	541	1.373	0.0821	No
3	SH2D1A	4760025	570	1.338	0.1295	No
4	H2AFZ	1470168	1287	0.879	0.1231	No
5	HNRPA0	2680048	1539	0.758	0.1374	No
6	LMNA	520471 1500075 3190167 4210020	1609	0.724	0.1602	No
7	KCNN3	6520600 6420138	1824	0.634	0.1718	No
8	OVOL1	1690131	2515	0.406	0.1495	No
9	RRM1	4150433	2613	0.383	0.1583	No
10	JPH1	610739	3296	0.240	0.1304	No
11	PDGFRA	2940332	3622	0.197	0.1200	No
12	SOX4	2260091	3867	0.169	0.1131	No
13	RRAGA	6400603	4245	0.138	0.0978	No
14	RORB	6400035	4863	0.099	0.0682	No
15	SRPK2	6380341	4887	0.098	0.0705	No
16	DSCAM	1780050 2450731 2810438	4891	0.098	0.0740	No
17	ETV1	70735 2940603 5080463	4991	0.094	0.0721	No
18	GNAZ	6130296	5030	0.092	0.0734	No
19	KIF12	4590014	5318	0.080	0.0608	No
20	MBNL1	2640762 7100048	5455	0.075	0.0563	No
21	DMD	1740041 3990332	5875	0.062	0.0360	No
22	CPA4	3610100	6616	0.044	-0.0023	No
23	PTPN4	1410047	6979	0.037	-0.0205	No
24	TEAD1	2470551	7492	0.027	-0.0471	No
25	NOX4	6040136	7670	0.025	-0.0557	No
26	BHLHB5	6510520	8000	0.020	-0.0727	No
27	RHOBTB3	4010687	8108	0.018	-0.0779	No
28	USP9X	130435 2370735 3120338	8576	0.011	-0.1026	No
29	TWIST1	5130619	8583	0.011	-0.1026	No
30	SLC6A5	870121	8686	0.009	-0.1077	No
31	SDPR	3360292	8749	0.008	-0.1107	No
32	SERPINI1	2940468	9697	-0.004	-0.1616	No
33	PHOX2B	5270075	10507	-0.016	-0.2046	No
34	SP7	1050315	10515	-0.017	-0.2044	No
35	GPM6A	1660044 2750152	10752	-0.020	-0.2164	No
36	SLC5A3	4280167	10883	-0.022	-0.2226	No
37	TCF4	520021	10947	-0.023	-0.2251	No
38	DKK2	3610433	11118	-0.026	-0.2333	No
39	FSTL5	770280	11336	-0.030	-0.2440	No
40	FLI1	3990142	11473	-0.032	-0.2501	No
41	OTP	2630070	12191	-0.047	-0.2870	No
42	FIP1L1	4590538 6510333	12418	-0.053	-0.2973	No
43	TITF1	3390554 4540292	12754	-0.062	-0.3131	No
44	CNTFR	4480092 6200064	13374	-0.085	-0.3433	No
45	CHRDL1	1580037 6380204	13783	-0.104	-0.3615	No
46	GLRA1	610575	14375	-0.140	-0.3882	No
47	JMJD1C	940575 2120025	14662	-0.165	-0.3976	No
48	ERG	50154 1770739	14665	-0.166	-0.3917	No
49	XKRX	3800192	14741	-0.172	-0.3894	No
50	SOSTDC1	6760017	14776	-0.176	-0.3848	No
51	JARID2	6290538	14781	-0.177	-0.3785	No
52	TAF5	3450288 5890193 6860435	14976	-0.195	-0.3818	No
53	SNX26	6660215	15194	-0.222	-0.3854	No
54	UBE2N	520369 2900047	15728	-0.307	-0.4029	No
55	SUMO1	1990364 2760338 6380195	16142	-0.393	-0.4107	Yes
56	STOML2	1940487	16305	-0.439	-0.4034	Yes
57	YARS	70739	16312	-0.441	-0.3876	Yes
58	MAP2K5	2030440	16334	-0.448	-0.3723	Yes
59	TRERF1	6370017 6940138	16384	-0.462	-0.3580	Yes
60	TAX1BP3	940706 6100687 6220176	17954	-1.168	-0.3998	Yes
61	SLC26A6	4810575	18043	-1.242	-0.3591	Yes
62	PDCD10	4760500	18286	-1.549	-0.3154	Yes
63	HMGA1	6580408	18323	-1.609	-0.2584	Yes
64	RTN4RL1	2630368	18572	-2.549	-0.1785	Yes
65	POU2AF1	5690242	18615	-4.937	0.0001	Yes