Details for gene set V$E2F

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch_repos
Phenotype	phenotype_absentNotch_versus_wtNotch.cls#absentNotch_versus_wtNotch_repos
Upregulated in class	absentNotch
GeneSet	V$E2F_Q6
Enrichment Score (ES)	0.50766784
Normalized Enrichment Score (NES)	1.5047697
Nominal p-value	0.0
FDR q-value	0.15994467
FWER p-Value	0.892

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	TMPO	4050494	39	2.767	0.0358	Yes
2	SOAT1	1190019	126	2.177	0.0610	Yes
3	PPM1D	1690193	156	2.052	0.0875	Yes
4	DCK	6900411	181	1.963	0.1131	Yes
5	UGCGL1	4230072	231	1.856	0.1359	Yes
6	GSPT1	5420050	240	1.825	0.1605	Yes
7	AP4M1	70609 3440128	325	1.638	0.1784	Yes
8	E2F1	5360093	394	1.543	0.1958	Yes
9	ZCCHC8	2260332 2350487	531	1.377	0.2073	Yes
10	STMN1	1990717	548	1.364	0.2252	Yes
11	SFRS1	2360440	606	1.309	0.2400	Yes
12	ALDH6A1	1770746	673	1.249	0.2535	Yes
13	NASP	2260139 2940369 5130707	754	1.193	0.2656	Yes
14	IL4I1	3190161	763	1.188	0.2814	Yes
15	HTF9C	3190048 4120132	764	1.188	0.2977	Yes
16	PHC1	520195	771	1.184	0.3136	Yes
17	CDC25A	3800184	844	1.122	0.3251	Yes
18	RBL1	3130372	913	1.074	0.3361	Yes
19	CTCF	5340017	920	1.070	0.3504	Yes
20	POLD3	6400278	925	1.066	0.3648	Yes
21	NUP62	1240128	1023	1.009	0.3734	Yes
22	FANCD2	1850280 6840348	1036	1.003	0.3865	Yes
23	SFRS2	50707 380593	1090	0.992	0.3972	Yes
24	POLE4	6860097	1188	0.944	0.4049	Yes
25	H2AFZ	1470168	1287	0.879	0.4116	Yes
26	KPNB1	1690138	1386	0.833	0.4178	Yes
27	PCNA	940754	1413	0.821	0.4276	Yes
28	CDCA7	3060097	1461	0.793	0.4359	Yes
29	MSH2	6180273	1472	0.787	0.4462	Yes
30	ACO2	4230600	1493	0.778	0.4557	Yes
31	MCM3	5570068	1651	0.703	0.4569	Yes
32	UNG	3130110 6100364	1740	0.670	0.4613	Yes
33	SLCO3A1	1050408 2370156 6110072	1848	0.624	0.4640	Yes
34	PIM1	630047	1855	0.621	0.4722	Yes
35	MCM4	2760673 5420711	1904	0.605	0.4779	Yes
36	AK2	4590458 4760195 6110097	2066	0.545	0.4766	Yes
37	RAB11B	3990609	2072	0.544	0.4838	Yes
38	PPP1R8	6290292	2083	0.540	0.4907	Yes
39	MRPL40	2370215	2144	0.515	0.4945	Yes
40	SLC38A1	520465	2192	0.502	0.4988	Yes
41	NOLC1	2350195	2219	0.494	0.5042	Yes
42	PPP1CC	6380300 2510647	2277	0.479	0.5077	Yes
43	MCM6	60092 540181 6510110	2587	0.390	0.4963	No
44	MCM2	5050139	2607	0.385	0.5005	No
45	BRMS1L	6110609	2766	0.345	0.4967	No
46	ATAD2	870242 2260687	2821	0.334	0.4983	No
47	POLA2	940519	2929	0.308	0.4968	No
48	HIST1H2AH	3710333	2951	0.303	0.4998	No
49	EZH2	6130605 6380524	3159	0.264	0.4922	No
50	HIRA	4480609 5270167	3217	0.252	0.4925	No
51	JPH1	610739	3296	0.240	0.4916	No
52	EFNA5	460707 2190519	3409	0.225	0.4886	No
53	USP37	2470433	3488	0.212	0.4873	No
54	EED	2320373	3557	0.204	0.4864	No
55	E2F3	50162 460180	3567	0.203	0.4887	No
56	UFD1L	870020	3686	0.191	0.4849	No
57	KCNA6	450291 1400086 1660291 2470576	3810	0.174	0.4807	No
58	SLC6A4	2230372	3868	0.169	0.4799	No
59	ADAMTS2	2650025 6370133 6840670	3869	0.169	0.4822	No
60	PRKDC	1400072 4230541	3975	0.161	0.4787	No
61	SNRPD1	4480162	4206	0.140	0.4682	No
62	RQCD1	1850139	4334	0.131	0.4631	No
63	HNRPUL1	2120008 4920408 5570180 6370609 6770403	4488	0.121	0.4565	No
64	WEE1	3390070	4707	0.107	0.4462	No
65	PVRL1	2570167 5220519 5890500 3190309	4817	0.101	0.4416	No
66	UXT	110019 5080066	5042	0.091	0.4308	No
67	PCSK1	2350148	5212	0.085	0.4228	No
68	STAG1	1190300 1400722 4590100	5258	0.083	0.4215	No
69	PAQR4	730736	5428	0.076	0.4134	No
70	SMAD6	870504	5437	0.076	0.4140	No
71	DMD	1740041 3990332	5875	0.062	0.3912	No
72	FMO4	360735	5909	0.061	0.3902	No
73	PRPF4B	940181 2570300	5922	0.061	0.3904	No
74	CLSPN	2190239 2630687 5550632	6311	0.051	0.3701	No
75	SP3	3840338	6387	0.049	0.3667	No
76	ASXL2	130670	6440	0.048	0.3645	No
77	E2F7	4200056	6467	0.047	0.3638	No
78	YBX2	3520441	7144	0.033	0.3276	No
79	HOXC10	5360170	7178	0.033	0.3263	No
80	MCM8	6130743	7491	0.027	0.3097	No
81	ACBD6	4200446	7686	0.024	0.2996	No
82	PAX6	1190025	7921	0.021	0.2872	No
83	GABRB3	4150164	8047	0.019	0.2807	No
84	RHD	4050168	8129	0.018	0.2765	No
85	CBX5	3830072 6290167	8613	0.010	0.2505	No
86	PODN	3710068	8644	0.010	0.2490	No
87	MYH10	2640673	8745	0.008	0.2437	No
88	ARHGAP6	2060121	8804	0.008	0.2407	No
89	DNAJC9	6130019	9268	0.001	0.2156	No
90	MCM7	3290292 5220056	9304	0.001	0.2137	No
91	CASP8AP2	5910593	9488	-0.002	0.2039	No
92	ZBTB4	6450441	9543	-0.002	0.2010	No
93	IPO7	2190746	9935	-0.008	0.1799	No
94	ILF3	940722 3190647 6520110	9953	-0.008	0.1791	No
95	POLE2	6110041	10004	-0.009	0.1765	No
96	EPHB1	4610056	10322	-0.014	0.1595	No
97	NELL2	2340725 4280301 5420008	10337	-0.014	0.1590	No
98	HNRPD	4120021	10669	-0.019	0.1413	No
99	TYRO3	3130193	11091	-0.026	0.1188	No
100	NUP153	7000452	11592	-0.035	0.0922	No
101	GRIA4	2640131	11683	-0.037	0.0879	No
102	STK35	2360121	11781	-0.038	0.0831	No
103	TREX2	4920707	12048	-0.044	0.0693	No
104	TOPBP1	6020333	12075	-0.044	0.0685	No
105	INSM1	3450671	12196	-0.047	0.0627	No
106	PHF15	6550066 6860673	12753	-0.062	0.0334	No
107	GMNN	2630148	13220	-0.078	0.0092	No
108	FBXO5	2630551	13457	-0.088	-0.0023	No
109	HS6ST3	5910138	13472	-0.089	-0.0019	No
110	NRP2	4070400 5860041 6650446	13477	-0.089	-0.0009	No
111	HNRPR	2320440 2900601 4610008	13599	-0.094	-0.0061	No
112	CCNT1	2450563 5390184	14069	-0.120	-0.0299	No
113	CDC6	4570296 5360600	14080	-0.120	-0.0288	No
114	ING3	110438 2060390	14093	-0.121	-0.0278	No
115	CORT	360008 2340092	14138	-0.124	-0.0285	No
116	GPRC5B	2760114	14692	-0.168	-0.0561	No
117	MXD3	6220014	14757	-0.174	-0.0572	No
118	KCND2	1170128 2100112	14837	-0.182	-0.0590	No
119	HNRPA1	4670398 5050687	14863	-0.184	-0.0578	No
120	NCL	2360463 4540279	14934	-0.191	-0.0590	No
121	FHOD1	2680279	15011	-0.199	-0.0604	No
122	SEMA5A	6200110 6520435	15187	-0.221	-0.0668	No
123	SEMA6A	2690138 3060021	15250	-0.230	-0.0670	No
124	STAG2	4540132	15364	-0.245	-0.0698	No
125	ARID4A	520156 1050707	15524	-0.274	-0.0746	No
126	RAD51	6110450 6980280	15572	-0.281	-0.0733	No
127	TBX6	4730139 6840647	15933	-0.346	-0.0881	No
128	HCN3	3940438 6840750	16075	-0.377	-0.0906	No
129	CDC45L	70537 3130114	16078	-0.378	-0.0855	No
130	SUMO1	1990364 2760338 6380195	16142	-0.393	-0.0835	No
131	POLR2A	5220647	16148	-0.395	-0.0784	No
132	HIST1H4A	1940600	16227	-0.416	-0.0769	No
133	ERBB2IP	580253 1090672	16238	-0.419	-0.0717	No
134	MAZ	3360121 6940750	16251	-0.423	-0.0666	No
135	DDB2	3520341 4610168 4850184 4920717	16363	-0.458	-0.0663	No
136	SFRS7	2760408	16381	-0.461	-0.0609	No
137	HIST1H2BK	6130433	16424	-0.474	-0.0567	No
138	RPS6KA5	2120563 7040546	16466	-0.485	-0.0523	No
139	PRPS1	6350129	16555	-0.513	-0.0500	No
140	RANBP1	430215 1090180	16580	-0.519	-0.0442	No
141	PHF13	450435	16748	-0.572	-0.0454	No
142	PHF5A	2690519	16856	-0.607	-0.0429	No
143	POLD1	4830026	16949	-0.641	-0.0391	No
144	DNAJC11	360465 3390215	17127	-0.719	-0.0388	No
145	SYNGR4	6520450	17200	-0.749	-0.0324	No
146	CDT1	3780682	17231	-0.761	-0.0236	No
147	DNMT1	2260097	17312	-0.791	-0.0171	No
148	SFRS10	6130528 6400438 7040112	17789	-1.047	-0.0286	No
149	HMGN2	3140091	17854	-1.096	-0.0170	No
150	ATF5	5670685	18029	-1.226	-0.0096	No
151	USP52	3710215 6380133	18224	-1.453	-0.0002	No
152	RRM2	6350059 6940162	18298	-1.562	0.0172	No