Details for gene set V$E2F

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch_repos
Phenotype	phenotype_absentNotch_versus_wtNotch.cls#absentNotch_versus_wtNotch_repos
Upregulated in class	absentNotch
GeneSet	V$E2F_Q4
Enrichment Score (ES)	0.50991875
Normalized Enrichment Score (NES)	1.5156575
Nominal p-value	0.0
FDR q-value	0.17964333
FWER p-Value	0.856

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	TMPO	4050494	39	2.767	0.0359	Yes
2	SOAT1	1190019	126	2.177	0.0612	Yes
3	PPM1D	1690193	156	2.052	0.0879	Yes
4	DCK	6900411	181	1.963	0.1136	Yes
5	UGCGL1	4230072	231	1.856	0.1364	Yes
6	GSPT1	5420050	240	1.825	0.1611	Yes
7	AP4M1	70609 3440128	325	1.638	0.1791	Yes
8	E2F1	5360093	394	1.543	0.1966	Yes
9	ZCCHC8	2260332 2350487	531	1.377	0.2082	Yes
10	STMN1	1990717	548	1.364	0.2261	Yes
11	SFRS1	2360440	606	1.309	0.2410	Yes
12	ALDH6A1	1770746	673	1.249	0.2546	Yes
13	NASP	2260139 2940369 5130707	754	1.193	0.2667	Yes
14	IL4I1	3190161	763	1.188	0.2826	Yes
15	HTF9C	3190048 4120132	764	1.188	0.2989	Yes
16	PHC1	520195	771	1.184	0.3149	Yes
17	CDC25A	3800184	844	1.122	0.3264	Yes
18	RBL1	3130372	913	1.074	0.3375	Yes
19	CTCF	5340017	920	1.070	0.3519	Yes
20	POLD3	6400278	925	1.066	0.3663	Yes
21	NUP62	1240128	1023	1.009	0.3749	Yes
22	FANCD2	1850280 6840348	1036	1.003	0.3881	Yes
23	SFRS2	50707 380593	1090	0.992	0.3989	Yes
24	POLE4	6860097	1188	0.944	0.4066	Yes
25	H2AFZ	1470168	1287	0.879	0.4134	Yes
26	KPNB1	1690138	1386	0.833	0.4195	Yes
27	PCNA	940754	1413	0.821	0.4294	Yes
28	CDCA7	3060097	1461	0.793	0.4378	Yes
29	MSH2	6180273	1472	0.787	0.4480	Yes
30	ACO2	4230600	1493	0.778	0.4576	Yes
31	MCM3	5570068	1651	0.703	0.4588	Yes
32	UNG	3130110 6100364	1740	0.670	0.4633	Yes
33	SLCO3A1	1050408 2370156 6110072	1848	0.624	0.4660	Yes
34	PIM1	630047	1855	0.621	0.4743	Yes
35	MCM4	2760673 5420711	1904	0.605	0.4800	Yes
36	AK2	4590458 4760195 6110097	2066	0.545	0.4787	Yes
37	RAB11B	3990609	2072	0.544	0.4860	Yes
38	PPP1R8	6290292	2083	0.540	0.4928	Yes
39	MRPL40	2370215	2144	0.515	0.4967	Yes
40	SLC38A1	520465	2192	0.502	0.5010	Yes
41	NOLC1	2350195	2219	0.494	0.5064	Yes
42	PPP1CC	6380300 2510647	2277	0.479	0.5099	Yes
43	MCM6	60092 540181 6510110	2587	0.390	0.4985	No
44	MCM2	5050139	2607	0.385	0.5028	No
45	EPC1	1570050 5290095 6900193	2623	0.380	0.5072	No
46	BRMS1L	6110609	2766	0.345	0.5043	No
47	ATAD2	870242 2260687	2821	0.334	0.5059	No
48	POLA2	940519	2929	0.308	0.5044	No
49	HIST1H2AH	3710333	2951	0.303	0.5074	No
50	EZH2	6130605 6380524	3159	0.264	0.4998	No
51	HIRA	4480609 5270167	3217	0.252	0.5002	No
52	JPH1	610739	3296	0.240	0.4993	No
53	EFNA5	460707 2190519	3409	0.225	0.4963	No
54	USP37	2470433	3488	0.212	0.4950	No
55	EED	2320373	3557	0.204	0.4941	No
56	E2F3	50162 460180	3567	0.203	0.4964	No
57	UFD1L	870020	3686	0.191	0.4927	No
58	KCNA6	450291 1400086 1660291 2470576	3810	0.174	0.4884	No
59	SLC6A4	2230372	3868	0.169	0.4876	No
60	ADAMTS2	2650025 6370133 6840670	3869	0.169	0.4900	No
61	PRKDC	1400072 4230541	3975	0.161	0.4865	No
62	SNRPD1	4480162	4206	0.140	0.4759	No
63	RQCD1	1850139	4334	0.131	0.4709	No
64	HNRPUL1	2120008 4920408 5570180 6370609 6770403	4488	0.121	0.4643	No
65	WEE1	3390070	4707	0.107	0.4539	No
66	PVRL1	2570167 5220519 5890500 3190309	4817	0.101	0.4494	No
67	UXT	110019 5080066	5042	0.091	0.4385	No
68	PCSK1	2350148	5212	0.085	0.4306	No
69	STAG1	1190300 1400722 4590100	5258	0.083	0.4293	No
70	PAQR4	730736	5428	0.076	0.4212	No
71	SMAD6	870504	5437	0.076	0.4218	No
72	DMD	1740041 3990332	5875	0.062	0.3989	No
73	FMO4	360735	5909	0.061	0.3980	No
74	CLSPN	2190239 2630687 5550632	6311	0.051	0.3770	No
75	SP3	3840338	6387	0.049	0.3736	No
76	ASXL2	130670	6440	0.048	0.3714	No
77	E2F7	4200056	6467	0.047	0.3707	No
78	CHD2	4070039	6889	0.038	0.3484	No
79	YBX2	3520441	7144	0.033	0.3351	No
80	HOXC10	5360170	7178	0.033	0.3338	No
81	MCM8	6130743	7491	0.027	0.3172	No
82	ACBD6	4200446	7686	0.024	0.3071	No
83	PAX6	1190025	7921	0.021	0.2947	No
84	GABRB3	4150164	8047	0.019	0.2882	No
85	RHD	4050168	8129	0.018	0.2840	No
86	CBX5	3830072 6290167	8613	0.010	0.2580	No
87	PODN	3710068	8644	0.010	0.2565	No
88	MYH10	2640673	8745	0.008	0.2512	No
89	ARHGAP6	2060121	8804	0.008	0.2482	No
90	WNT3	2360685	9218	0.002	0.2258	No
91	DNAJC9	6130019	9268	0.001	0.2232	No
92	MCM7	3290292 5220056	9304	0.001	0.2213	No
93	CASP8AP2	5910593	9488	-0.002	0.2114	No
94	ZBTB4	6450441	9543	-0.002	0.2085	No
95	ABI2	940368 4200092	9899	-0.007	0.1894	No
96	IPO7	2190746	9935	-0.008	0.1876	No
97	ILF3	940722 3190647 6520110	9953	-0.008	0.1868	No
98	POLE2	6110041	10004	-0.009	0.1842	No
99	EPHB1	4610056	10322	-0.014	0.1672	No
100	NELL2	2340725 4280301 5420008	10337	-0.014	0.1667	No
101	CRK	1230162 4780128	10536	-0.017	0.1562	No
102	HNRPD	4120021	10669	-0.019	0.1493	No
103	TYRO3	3130193	11091	-0.026	0.1268	No
104	NUP153	7000452	11592	-0.035	0.1002	No
105	GRIA4	2640131	11683	-0.037	0.0959	No
106	STK35	2360121	11781	-0.038	0.0911	No
107	TREX2	4920707	12048	-0.044	0.0773	No
108	TOPBP1	6020333	12075	-0.044	0.0765	No
109	INSM1	3450671	12196	-0.047	0.0707	No
110	PHF15	6550066 6860673	12753	-0.062	0.0414	No
111	GMNN	2630148	13220	-0.078	0.0173	No
112	FBXO5	2630551	13457	-0.088	0.0057	No
113	HS6ST3	5910138	13472	-0.089	0.0061	No
114	NRP2	4070400 5860041 6650446	13477	-0.089	0.0071	No
115	HNRPR	2320440 2900601 4610008	13599	-0.094	0.0019	No
116	CCNT1	2450563 5390184	14069	-0.120	-0.0219	No
117	CDC6	4570296 5360600	14080	-0.120	-0.0208	No
118	ING3	110438 2060390	14093	-0.121	-0.0197	No
119	CORT	360008 2340092	14138	-0.124	-0.0204	No
120	GPRC5B	2760114	14692	-0.168	-0.0481	No
121	MXD3	6220014	14757	-0.174	-0.0491	No
122	KCND2	1170128 2100112	14837	-0.182	-0.0509	No
123	HNRPA1	4670398 5050687	14863	-0.184	-0.0497	No
124	NCL	2360463 4540279	14934	-0.191	-0.0509	No
125	FHOD1	2680279	15011	-0.199	-0.0523	No
126	SEMA5A	6200110 6520435	15187	-0.221	-0.0587	No
127	STAG2	4540132	15364	-0.245	-0.0649	No
128	ARID4A	520156 1050707	15524	-0.274	-0.0697	No
129	RAD51	6110450 6980280	15572	-0.281	-0.0684	No
130	TBX6	4730139 6840647	15933	-0.346	-0.0831	No
131	HCN3	3940438 6840750	16075	-0.377	-0.0856	No
132	CDC45L	70537 3130114	16078	-0.378	-0.0805	No
133	SUMO1	1990364 2760338 6380195	16142	-0.393	-0.0785	No
134	POLR2A	5220647	16148	-0.395	-0.0733	No
135	ERBB2IP	580253 1090672	16238	-0.419	-0.0724	No
136	MAZ	3360121 6940750	16251	-0.423	-0.0672	No
137	DDB2	3520341 4610168 4850184 4920717	16363	-0.458	-0.0670	No
138	SFRS7	2760408	16381	-0.461	-0.0615	No
139	HIST1H2BK	6130433	16424	-0.474	-0.0573	No
140	RPS6KA5	2120563 7040546	16466	-0.485	-0.0528	No
141	PRPS1	6350129	16555	-0.513	-0.0506	No
142	RANBP1	430215 1090180	16580	-0.519	-0.0447	No
143	PHF13	450435	16748	-0.572	-0.0459	No
144	PHF5A	2690519	16856	-0.607	-0.0433	No
145	POLD1	4830026	16949	-0.641	-0.0395	No
146	DNAJC11	360465 3390215	17127	-0.719	-0.0392	No
147	SYNGR4	6520450	17200	-0.749	-0.0328	No
148	CDT1	3780682	17231	-0.761	-0.0240	No
149	DNMT1	2260097	17312	-0.791	-0.0174	No
150	SFRS10	6130528 6400438 7040112	17789	-1.047	-0.0288	No
151	HMGN2	3140091	17854	-1.096	-0.0172	No
152	ATF5	5670685	18029	-1.226	-0.0098	No
153	USP52	3710215 6380133	18224	-1.453	-0.0003	No
154	RRM2	6350059 6940162	18298	-1.562	0.0172	No