Details for gene set V$ARNT

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch_repos
Phenotype	phenotype_absentNotch_versus_wtNotch.cls#absentNotch_versus_wtNotch_repos
Upregulated in class	absentNotch
GeneSet	V$ARNT_01
Enrichment Score (ES)	0.5047826
Normalized Enrichment Score (NES)	1.5168086
Nominal p-value	0.0
FDR q-value	0.19074352
FWER p-Value	0.852

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	NR1D1	2360471 770746 6590204	54	2.528	0.0251	Yes
2	PER1	3290315	76	2.373	0.0503	Yes
3	IFRD2	4150110	114	2.213	0.0728	Yes
4	KBTBD2	2320014	128	2.165	0.0961	Yes
5	EIF4B	5390563 5270577	143	2.090	0.1185	Yes
6	SNX8	3450315	171	2.000	0.1392	Yes
7	STX6	4850750 6770278	182	1.963	0.1604	Yes
8	LAMP1	2470524	203	1.920	0.1806	Yes
9	NUDC	4780025	224	1.882	0.2003	Yes
10	RHEBL1	2810576	350	1.591	0.2112	Yes
11	MTCH2	3780603 6620215	368	1.571	0.2277	Yes
12	BOK	1170373 5860446	374	1.565	0.2448	Yes
13	UBE4B	780008 3610154	453	1.473	0.2569	Yes
14	BCL11B	2680673	462	1.464	0.2726	Yes
15	ATP6V0B	2810112	473	1.444	0.2881	Yes
16	AKAP12	1450739	522	1.383	0.3008	Yes
17	STMN1	1990717	548	1.364	0.3146	Yes
18	RNF44	5910692	631	1.278	0.3243	Yes
19	EIF2C2	770451	649	1.267	0.3374	Yes
20	ALDH6A1	1770746	673	1.249	0.3500	Yes
21	COMMD3	2510259	828	1.142	0.3543	Yes
22	ARF6	3520026	843	1.123	0.3660	Yes
23	DDX3X	2190020	857	1.115	0.3777	Yes
24	PAICS	610142	881	1.095	0.3886	Yes
25	PTMA	5570148	933	1.061	0.3975	Yes
26	FXYD6	3870164	1001	1.020	0.4052	Yes
27	NIT1	1230338 3940671	1064	0.999	0.4129	Yes
28	CSRP2BP	4570717 5550333	1082	0.996	0.4230	Yes
29	CBARA1	360471	1127	0.973	0.4314	Yes
30	PPAT	1980019	1142	0.966	0.4414	Yes
31	UTX	2900017 6770452	1170	0.954	0.4505	Yes
32	CD164	3830594	1175	0.949	0.4608	Yes
33	ATP6V1C1	2690324 5220528	1311	0.865	0.4631	Yes
34	MAP2K6	1230056 2940204	1511	0.770	0.4608	Yes
35	DCTN4	3390010 5550170	1627	0.716	0.4625	Yes
36	HPS3	6650348	1635	0.711	0.4700	Yes
37	CLN3	780368	1720	0.678	0.4730	Yes
38	RPL13A	2680519 5700142	1797	0.644	0.4760	Yes
39	ATF7IP	2690176 6770021	1803	0.642	0.4828	Yes
40	UBXD3	5050193	1812	0.638	0.4894	Yes
41	EIF4E	1580403 70133 6380215	1940	0.587	0.4891	Yes
42	RPA1	360452	2010	0.563	0.4916	Yes
43	MRPL40	2370215	2144	0.515	0.4901	Yes
44	AATF	5220575	2180	0.505	0.4938	Yes
45	BRD2	1450300 5340484 6100605	2191	0.502	0.4988	Yes
46	PSME3	2810537	2265	0.483	0.5002	Yes
47	COMMD8	5890358	2339	0.455	0.5013	Yes
48	TCERG1	2350551 4540397 5220746	2366	0.445	0.5048	Yes
49	GATA4	1410215 2690609	2506	0.409	0.5018	No
50	EPC1	1570050 5290095 6900193	2623	0.380	0.4997	No
51	PAK2	360438 7050068	2712	0.358	0.4989	No
52	ARMCX3	3290309	2743	0.349	0.5011	No
53	RAB3IL1	380685 5420176	2864	0.323	0.4982	No
54	MNT	4920575	3000	0.295	0.4942	No
55	PABPN1	460519	3044	0.285	0.4950	No
56	LTBR	2450341	3075	0.278	0.4964	No
57	HIRA	4480609 5270167	3217	0.252	0.4916	No
58	JPH1	610739	3296	0.240	0.4900	No
59	SIRT1	1190731	3302	0.239	0.4924	No
60	SNAP25	360520	3381	0.228	0.4907	No
61	SHMT1	5900132	3534	0.207	0.4848	No
62	PDGFB	3060440 6370008	3574	0.203	0.4849	No
63	SYNCRIP	1690195 3140113 4670279	3755	0.182	0.4771	No
64	NEUROD2	5290097	4453	0.123	0.4407	No
65	NPTX1	3710736	4654	0.111	0.4311	No
66	TGFB2	4920292	4739	0.105	0.4277	No
67	DSCAM	1780050 2450731 2810438	4891	0.098	0.4206	No
68	ETV1	70735 2940603 5080463	4991	0.094	0.4163	No
69	MBNL1	2640762 7100048	5455	0.075	0.3920	No
70	FOXF2	1240091	5609	0.070	0.3845	No
71	SLC39A11	5860687	5702	0.067	0.3802	No
72	TCEAL1	870577	5965	0.059	0.3667	No
73	VLDLR	870722 3060047 5340452 6550131	6132	0.055	0.3583	No
74	HOXA1	1190524 5420142	6140	0.055	0.3585	No
75	SYT3	6380017	6187	0.054	0.3566	No
76	FOXD3	6550156	6234	0.053	0.3547	No
77	NPM1	4730427	6501	0.046	0.3408	No
78	FLT3	2640487	6511	0.046	0.3408	No
79	POGK	5290315	6946	0.037	0.3177	No
80	ADAMTS19	2680739	7336	0.030	0.2970	No
81	PICALM	1940280	7366	0.030	0.2957	No
82	TBC1D15	870673	7416	0.029	0.2934	No
83	NKX2-2	4150731	7522	0.027	0.2880	No
84	JAG1	3440390	7720	0.024	0.2776	No
85	HOXA11	6980133	7781	0.023	0.2746	No
86	PAX6	1190025	7921	0.021	0.2672	No
87	ABCA1	6290156	8095	0.018	0.2581	No
88	TBC1D5	5360619 6130603	8168	0.017	0.2544	No
89	SNX5	1570021 6860609	8216	0.016	0.2520	No
90	CBX5	3830072 6290167	8613	0.010	0.2306	No
91	PCDHA10	3830725	8627	0.010	0.2300	No
92	ZBTB10	4200132	8817	0.007	0.2199	No
93	DNMT3A	4050068 4810717	8894	0.006	0.2158	No
94	SLC38A5	540093	9009	0.005	0.2097	No
95	AKAP10	2630504 5910577	9063	0.004	0.2069	No
96	XPO1	540707	9072	0.004	0.2065	No
97	CELSR3	5270731 7100082	9092	0.004	0.2055	No
98	AP1S2	780279 4280707	9161	0.003	0.2018	No
99	HOXB5	2900538	9272	0.001	0.1959	No
100	HOXD10	6100039	9479	-0.002	0.1847	No
101	ETV4	2450605	9556	-0.003	0.1806	No
102	TRPM7	2510408	9576	-0.003	0.1796	No
103	SLCO1C1	5390494	9602	-0.003	0.1783	No
104	EIF3S10	1190079 3840176	9662	-0.004	0.1752	No
105	ODC1	5670168	9891	-0.007	0.1629	No
106	ILF3	940722 3190647 6520110	9953	-0.008	0.1597	No
107	BMP2K	60541 5570504	10007	-0.009	0.1569	No
108	AMPD2	630093 1170070	10071	-0.010	0.1536	No
109	UBE2B	4780497	10616	-0.018	0.1243	No
110	BHLHB3	3450438	10774	-0.020	0.1160	No
111	DNAJB9	460114	10968	-0.024	0.1058	No
112	ELAVL3	2850014	11765	-0.038	0.0630	No
113	PHC3	4920332	12249	-0.048	0.0374	No
114	HOXA7	5910152	12270	-0.049	0.0368	No
115	MTUS1	780348 4920609	12457	-0.054	0.0274	No
116	SYT6	2510280 3850128 4540064	12659	-0.059	0.0171	No
117	PPP1R3C	2640170	12767	-0.062	0.0120	No
118	BDNF	2940128 3520368	12822	-0.064	0.0098	No
119	BMP4	380113	12965	-0.069	0.0028	No
120	TAC1	7000195 380706	12971	-0.069	0.0033	No
121	DVL2	6110162	12999	-0.070	0.0027	No
122	RNF128	1230300 5670273	13167	-0.077	-0.0056	No
123	FGF14	2630390 3520075 6770048	13250	-0.079	-0.0091	No
124	CNNM1	2190433	13473	-0.089	-0.0202	No
125	NRIP3	1340372	13833	-0.106	-0.0385	No
126	RBBP6	2320129	13909	-0.111	-0.0413	No
127	HOXB7	4540706 4610358	14123	-0.123	-0.0515	No
128	NEUROG2	5420278	14144	-0.124	-0.0512	No
129	QTRT1	1340162	14349	-0.139	-0.0607	No
130	NEUROD1	3060619	14437	-0.145	-0.0638	No
131	TESK2	6520524	14461	-0.147	-0.0634	No
132	ARRDC3	4610390	14499	-0.150	-0.0638	No
133	EGLN2	540086	14556	-0.156	-0.0651	No
134	PPRC1	1740441	14616	-0.161	-0.0665	No
135	HSPD1	60097 2030451	14618	-0.161	-0.0648	No
136	ESRRA	6550242	14663	-0.165	-0.0653	No
137	GATA5	430465	14714	-0.169	-0.0661	No
138	LZTS2	2260440	14737	-0.172	-0.0654	No
139	ARMET	5130670	14800	-0.178	-0.0668	No
140	COPS7A	3940458 7000022	14847	-0.182	-0.0673	No
141	HNRPA1	4670398 5050687	14863	-0.184	-0.0661	No
142	DUSP7	2940309	15078	-0.207	-0.0754	No
143	RCL1	1980408 2680008 3800176	15243	-0.229	-0.0817	No
144	SCYL1	5050717	15252	-0.230	-0.0796	No
145	SLC35A5	2970670 4480546	15258	-0.231	-0.0773	No
146	ATP6V1A	6590242	15291	-0.234	-0.0765	No
147	ISGF3G	3190131 7100142	15323	-0.240	-0.0755	No
148	CRY2	6290722	15343	-0.243	-0.0738	No
149	NR5A1	70707	15553	-0.278	-0.0821	No
150	SNX2	2470068 3360364 6510064	15672	-0.298	-0.0852	No
151	MYST3	5270500	15896	-0.339	-0.0935	No
152	GTF2H1	2570746 2650148	16213	-0.412	-0.1061	No
153	SMYD4	2640403	16224	-0.415	-0.1020	No
154	B3GALT6	50195	16375	-0.460	-0.1051	No
155	NDUFA7	5900722	16396	-0.467	-0.1010	No
156	TIMM9	2450484	16541	-0.508	-0.1031	No
157	PRPS1	6350129	16555	-0.513	-0.0982	No
158	AP1GBP1	2510372	16937	-0.638	-0.1118	No
159	PPP1R1B	5290403 5550324	17085	-0.698	-0.1120	No
160	CCAR1	3190092	17272	-0.777	-0.1135	No
161	IL15RA	2570270 3190711 6100091 6100270	17309	-0.790	-0.1067	No
162	ZCCHC7	6510592	17316	-0.793	-0.0982	No
163	VPS16	430064 3390041 6860301	17503	-0.893	-0.0984	No
164	PLCG2	5720008	17515	-0.899	-0.0890	No
165	UBXD1	5130079 5390167	17641	-0.971	-0.0850	No
166	RTN4	50725 630647 870097 870184	17730	-1.005	-0.0787	No
167	TEF	1050050 3120397 4060487	17737	-1.008	-0.0678	No
168	OPRS1	6130128 6290717	17771	-1.032	-0.0582	No
169	ZFYVE26	6860152	17806	-1.060	-0.0483	No
170	HMGN2	3140091	17854	-1.096	-0.0387	No
171	VARS2	1410017 3800114 4210270	17972	-1.182	-0.0319	No
172	HOXB4	540131	18050	-1.246	-0.0223	No
173	CHD4	5420059 6130338 6380717	18210	-1.424	-0.0151	No
174	UBE1	4150139 7050463	18312	-1.584	-0.0030	No
175	LEF1	2470082 7100288	18402	-1.758	0.0116	No