Details for gene set REACTOME

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch_repos
Phenotype	phenotype_absentNotch_versus_wtNotch.cls#absentNotch_versus_wtNotch_repos
Upregulated in class	absentNotch
GeneSet	REACTOME_HEMOSTASIS
Enrichment Score (ES)	0.5057478
Normalized Enrichment Score (NES)	1.4807022
Nominal p-value	0.0
FDR q-value	0.7459996
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PRKCZ	3780279	21	3.117	0.0451	Yes
2	PTK2	1780148	28	3.004	0.0894	Yes
3	ITGB1	5080156 6270528	36	2.818	0.1309	Yes
4	CD63	6660451	173	1.986	0.1530	Yes
5	CD9	4730041	208	1.912	0.1796	Yes
6	GRB7	2100471	249	1.791	0.2040	Yes
7	VCL	4120487	273	1.734	0.2285	Yes
8	GNG2	2230390	332	1.627	0.2495	Yes
9	PF4	6130332	396	1.542	0.2690	Yes
10	GNB1	2120397	426	1.508	0.2898	Yes
11	FLNA	5390193	488	1.422	0.3077	Yes
12	ACTN4	3840301 4590390 7050132	572	1.337	0.3230	Yes
13	GNA13	4590102	740	1.205	0.3319	Yes
14	APP	2510053	778	1.180	0.3474	Yes
15	FYB	1690440	781	1.178	0.3648	Yes
16	PFN1	6130132	787	1.169	0.3819	Yes
17	PLAU	6510047	797	1.164	0.3987	Yes
18	PDPK1	6650168	798	1.163	0.4159	Yes
19	CLU	5420075	820	1.148	0.4318	Yes
20	PIK3CB	3800600	837	1.134	0.4478	Yes
21	GAS6	4480021	1116	0.979	0.4473	Yes
22	LAMP2	1230402 1980373	1208	0.932	0.4562	Yes
23	KRAS	2060170	1666	0.698	0.4419	Yes
24	WDR1	1090129 3990121	1681	0.692	0.4514	Yes
25	IGF1	1990193 3130377 3290280	1730	0.674	0.4588	Yes
26	TFPI	1400288 5550008	1776	0.652	0.4660	Yes
27	STX4	6270632	2007	0.564	0.4620	Yes
28	C1QBP	3170452	2032	0.556	0.4689	Yes
29	MERTK	6420056	2045	0.553	0.4765	Yes
30	TUBA4A	6900279	2258	0.484	0.4722	Yes
31	PLAUR	5910280	2415	0.432	0.4702	Yes
32	SERPING1	5550440	2446	0.424	0.4748	Yes
33	MAPK14	5290731	2468	0.418	0.4799	Yes
34	CAP1	2650278	2472	0.417	0.4859	Yes
35	CD47	1850603	2489	0.413	0.4912	Yes
36	CALU	2680403 3520056 4610348 5720176 6130121	2542	0.400	0.4943	Yes
37	DOK2	5340273	2591	0.389	0.4975	Yes
38	COL1A2	380364	2647	0.373	0.5001	Yes
39	TIMP1	1010326	2734	0.351	0.5006	Yes
40	PSAP	2810338	2877	0.320	0.4977	Yes
41	ITGAV	2340020	2882	0.319	0.5022	Yes
42	FYN	2100468 4760520 4850687	2920	0.311	0.5048	Yes
43	P2RX1	2940021 3290338	2985	0.296	0.5057	Yes
44	APOA1	110152	3085	0.278	0.5045	No
45	FGA	4210056 5220239	3653	0.193	0.4767	No
46	PLCG1	6020369	3983	0.160	0.4612	No
47	F12	1090215 3520736	4086	0.150	0.4580	No
48	COL1A1	730020	4444	0.124	0.4405	No
49	GNAQ	430670 4210131 5900736	4671	0.110	0.4299	No
50	F11	6370577 6510373	4684	0.109	0.4308	No
51	F10	3830450	5023	0.092	0.4139	No
52	PLAT	6860128	5082	0.090	0.4121	No
53	PROS1	5420465	5164	0.086	0.4090	No
54	MMRN1	7050278	5179	0.086	0.4095	No
55	THBD	1500092	5181	0.086	0.4107	No
56	JAM2	1410164 5080114 5290541	5423	0.076	0.3988	No
57	CALM1	380128	5447	0.076	0.3987	No
58	STXBP3	780706	5468	0.075	0.3987	No
59	F5	1990619	5499	0.074	0.3982	No
60	PLEK	1090039	5517	0.073	0.3984	No
61	HSPA5	5130671	5685	0.068	0.3903	No
62	ITGAX	6130524	5769	0.065	0.3868	No
63	ITGA5	5550520	5820	0.064	0.3850	No
64	MAG	2370037	6033	0.057	0.3744	No
65	RAP1A	1090025	6127	0.055	0.3702	No
66	SYK	6940133	6203	0.053	0.3669	No
67	TMSB4X	6620114	6439	0.048	0.3549	No
68	GP1BB	3780075	6721	0.041	0.3403	No
69	BCAR1	1340215	6757	0.041	0.3390	No
70	CXADR	6370068	6843	0.039	0.3350	No
71	SHC1	2900731 3170504 6520537	7007	0.036	0.3267	No
72	PTPN11	2230100 2470180 6100528	7089	0.034	0.3228	No
73	PPBP	5130446	7202	0.032	0.3173	No
74	CFD	2320736	7455	0.028	0.3040	No
75	P2RY1	6040121	7662	0.025	0.2932	No
76	PLG	3360270 3840100	7965	0.020	0.2772	No
77	GP9	1190181	8185	0.017	0.2656	No
78	LEFTY2	5670364	8270	0.015	0.2613	No
79	F8	2190647 2340465	8286	0.015	0.2607	No
80	F2RL2	6110736	8350	0.014	0.2575	No
81	CAV1	870025	8465	0.013	0.2515	No
82	KNG1	6400576 6770347	8500	0.012	0.2498	No
83	F13B	6220278	8574	0.011	0.2460	No
84	FCER1G	5550020	8594	0.011	0.2452	No
85	F9	3190154	8633	0.010	0.2433	No
86	F3	2940180	8715	0.009	0.2390	No
87	APBB1IP	4560441 4570706 6520739	9291	0.001	0.2079	No
88	AKT1	5290746	9501	-0.002	0.1966	No
89	ADRA2A	5340520	9575	-0.003	0.1927	No
90	ITGA2B	2680538	9689	-0.004	0.1866	No
91	ANGPT1	3990368 5130288 6770035	9731	-0.005	0.1845	No
92	PROC	6520270	9774	-0.005	0.1823	No
93	SERPINC1	1780717	9957	-0.008	0.1726	No
94	PIK3R1	4730671	9986	-0.008	0.1712	No
95	CD36	5890575	10378	-0.014	0.1502	No
96	HRG	2340161	10389	-0.015	0.1499	No
97	CD48	1570647	10417	-0.015	0.1487	No
98	GP1BA	6590372	10659	-0.019	0.1359	No
99	PLA2G4A	6380364	10846	-0.021	0.1261	No
100	LCP2	2680066 6650707	10878	-0.022	0.1248	No
101	SERPINE1	4210403	11026	-0.025	0.1172	No
102	FGB	7000010	11128	-0.026	0.1121	No
103	SPARC	1690086	11350	-0.030	0.1006	No
104	OLR1	50025 3840484	11881	-0.040	0.0725	No
105	A2M	6620039	12256	-0.049	0.0530	No
106	TEK	6350541	12421	-0.053	0.0449	No
107	HGF	3360593	12498	-0.055	0.0416	No
108	ITGB3	5270463	12530	-0.056	0.0407	No
109	LYN	6040600	12550	-0.056	0.0405	No
110	ITGA4	2470739	12738	-0.061	0.0313	No
111	PTPN1	2650056	12832	-0.064	0.0272	No
112	ITGAM	1190373	12864	-0.065	0.0265	No
113	VWF	4670519	13552	-0.092	-0.0093	No
114	EGF	5220154	13636	-0.096	-0.0124	No
115	FN1	1170601 2970647 6220288 6940037	13693	-0.099	-0.0139	No
116	GRB14	510035 3060369	13729	-0.100	-0.0143	No
117	FGG	4610717	13839	-0.107	-0.0187	No
118	THBS1	4560494 430288	13959	-0.114	-0.0234	No
119	GP5	2510088	14000	-0.116	-0.0239	No
120	APOB	2370672	14114	-0.123	-0.0282	No
121	F2	5720280	14186	-0.127	-0.0301	No
122	ANGPT2	1230458 5720706 6040605	14506	-0.151	-0.0451	No
123	F2R	4810180	14545	-0.155	-0.0449	No
124	PPIA	2900368 4850162	14546	-0.156	-0.0426	No
125	SERPINF2	2470390 2690292	14711	-0.169	-0.0489	No
126	SLC16A3	1030564 4830452	14852	-0.183	-0.0538	No
127	SOS1	7050338	15025	-0.201	-0.0601	No
128	KLKB1	5390446	15333	-0.241	-0.0732	No
129	TBXA2R	2370292 3940066	15600	-0.286	-0.0833	No
130	SELL	1190500	15801	-0.322	-0.0894	No
131	F7	5080411	15824	-0.325	-0.0857	No
132	SOD1	5890070	15974	-0.356	-0.0885	No
133	SERPINB2	70487	16449	-0.481	-0.1070	No
134	PIK3CG	5890110	16793	-0.589	-0.1169	No
135	VAV1	6020487	17150	-0.727	-0.1253	No
136	CSK	6350593	17322	-0.796	-0.1228	No
137	PPIL2	6020279	17331	-0.799	-0.1113	No
138	SELP	6040193	17347	-0.808	-0.1002	No
139	ITGAL	1450324	17424	-0.848	-0.0917	No
140	PTPN6	4230128	17484	-0.885	-0.0817	No
141	PLCG2	5720008	17515	-0.899	-0.0700	No
142	BSG	2900193 6520053	17735	-1.007	-0.0669	No
143	CFL1	2340735	17767	-1.027	-0.0533	No
144	CD2	430672	18183	-1.387	-0.0552	No
145	SPN	3520338 3870671	18237	-1.468	-0.0363	No
146	ITGB2	6380348	18313	-1.590	-0.0167	No
147	ALDOA	6290672	18544	-2.228	0.0039	No