Details for gene set SANSOM_APC_LOSS5

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch_repos
Phenotype	phenotype_absentNotch_versus_truncNotch.cls#absentNotch_versus_truncNotch_repos
Upregulated in class	absentNotch
GeneSet	SANSOM_APC_LOSS5_UP
Enrichment Score (ES)	0.68488514
Normalized Enrichment Score (NES)	1.8707211
Nominal p-value	0.0
FDR q-value	0.006169725
FWER p-Value	0.019

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	2810037C14RIK	5290575	29	5.066	0.0631	Yes
2	CDCA7	3060097	118	4.044	0.1099	Yes
3	FTSJ3	3140100	163	3.783	0.1558	Yes
4	GNL3	4050338 4810500	198	3.608	0.2000	Yes
5	PRKRIR	2370402	242	3.448	0.2417	Yes
6	HNRPAB	540504	266	3.358	0.2833	Yes
7	DDX21	6100446	409	2.918	0.3128	Yes
8	ETF1	6770075	620	2.447	0.3327	Yes
9	NSUN2	2120193	676	2.354	0.3598	Yes
10	HK2	2640722	770	2.214	0.3830	Yes
11	EIF1	5080100	836	2.124	0.4066	Yes
12	SOX4	2260091	935	1.992	0.4267	Yes
13	NOL5	580731	945	1.978	0.4515	Yes
14	CIRH1A	2340372	995	1.892	0.4729	Yes
15	FEM1B	1230110	1164	1.704	0.4856	Yes
16	UTP14A	6590048	1174	1.694	0.5067	Yes
17	COPS2	3060142	1232	1.637	0.5246	Yes
18	4930573I19RIK	5270402	1308	1.544	0.5402	Yes
19	NCL	2360463 4540279	1310	1.541	0.5598	Yes
20	EIF4G2	3800575 6860184	1379	1.470	0.5749	Yes
21	TIAM1	5420288	1420	1.424	0.5909	Yes
22	GNL2	6620022	1483	1.362	0.6049	Yes
23	PES1	2470427	1503	1.335	0.6209	Yes
24	1190002H23RIK	4480128	1672	1.171	0.6268	Yes
25	ETS2	360451	1716	1.141	0.6391	Yes
26	PRIM2A	7000692	1791	1.081	0.6489	Yes
27	SRR	1190465 3800494	1879	1.027	0.6573	Yes
28	ZFP90	580121	1933	0.998	0.6671	Yes
29	RNF4	580286 1400152	1960	0.986	0.6783	Yes
30	MAP4K4	2360059	2060	0.933	0.6849	Yes
31	IFIT2	4810735	2758	0.558	0.6544	No
32	CD24	1780091	2932	0.485	0.6513	No
33	FUSIP1	520082 5390114	3143	0.410	0.6452	No
34	MYC	380541 4670170	3372	0.337	0.6372	No
35	ZRF1	6020181 6510484	3489	0.297	0.6347	No
36	RIN2	2450184	3723	0.234	0.6251	No
37	ORC2L	1990470 6510019	3731	0.231	0.6277	No
38	TXNL4A	4120286 6510242	3870	0.204	0.6228	No
39	OLFR91	6290020	4002	0.177	0.6180	No
40	FOXA2	540338 5860441	4553	0.108	0.5897	No
41	LAMC2	450692 2680041 4200059 4670148	4629	0.102	0.5870	No
42	NUP54	940546 2360156 4060278	5060	0.073	0.5647	No
43	SEMA3C	7000020	5225	0.066	0.5567	No
44	EPHB3	6650341	5432	0.057	0.5463	No
45	RNF149	5270494	5435	0.057	0.5470	No
46	BTC	3190133	5492	0.055	0.5446	No
47	KIF5A	510435	5607	0.052	0.5391	No
48	SYNCRIP	1690195 3140113 4670279	6115	0.036	0.5122	No
49	PKP1	1500433	6637	0.024	0.4844	No
50	CITED1	2350670	6682	0.023	0.4824	No
51	PTBP2	1240398	6725	0.022	0.4804	No
52	ZFP97	520324	7155	0.014	0.4574	No
53	REPS1	2320603 2510333	7251	0.012	0.4524	No
54	9630050M13RIK	2370086	7318	0.011	0.4490	No
55	PLA2G12A	1740463 4010066 4050348	7793	0.002	0.4235	No
56	ADAM8	450347 5670609	8744	-0.013	0.3724	No
57	FAM60A	3940092	8756	-0.014	0.3720	No
58	TSPAN12	4120010	8819	-0.015	0.3688	No
59	1110014J01RIK	1980332	8953	-0.017	0.3618	No
60	TGFBR1	1400148 4280020 6550711	9267	-0.022	0.3452	No
61	HELLS	4560086 4810025	9678	-0.030	0.3235	No
62	MYO1B	770372	10173	-0.041	0.2974	No
63	ANP32B	940095 2450494 4200368	10218	-0.041	0.2955	No
64	FGFR4	2650072	11007	-0.059	0.2538	No
65	2300002G24RIK	2320040	11112	-0.062	0.2489	No
66	MMP7	1780497	11916	-0.089	0.2067	No
67	KIF20A	2650050	12325	-0.108	0.1861	No
68	CEBPZ	2970053 2680068	12470	-0.116	0.1798	No
69	PLA2G2A	3190458	12536	-0.120	0.1779	No
70	HDC	4150463	13208	-0.166	0.1438	No
71	ZZZ3	780133 2320239 2640452 5080706 6550341	13217	-0.167	0.1455	No
72	DDIT4	2570408	13851	-0.234	0.1143	No
73	KCND2	1170128 2100112	13984	-0.250	0.1104	No
74	CD44	3990072 4850671 5860411 6860148 7050551	14275	-0.293	0.0985	No
75	TNFRSF19	3870731 6940730	14385	-0.313	0.0966	No
76	MDFI	6200041	15343	-0.546	0.0519	No
77	KCNQ1	1580050 6860441	16168	-0.942	0.0195	No
78	ZBTB17	6220082	16559	-1.168	0.0133	No
79	SLC27A1	6110093	16785	-1.324	0.0181	No
80	CDK9	630707	16907	-1.447	0.0300	No
81	SMYD5	6220025	17541	-1.940	0.0206	No
82	GRWD1	6350528	18211	-2.926	0.0219	No