Details for gene set HSA04110_CELL

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch_repos
Phenotype	phenotype_absentNotch_versus_truncNotch.cls#absentNotch_versus_truncNotch_repos
Upregulated in class	absentNotch
GeneSet	HSA04110_CELL_CYCLE
Enrichment Score (ES)	0.60140747
Normalized Enrichment Score (NES)	1.7376692
Nominal p-value	0.0
FDR q-value	0.034962736
FWER p-Value	0.385

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	HDAC2	4050433	20	5.359	0.0374	Yes
2	ANAPC1	6350162	41	4.838	0.0710	Yes
3	YWHAB	1740176	56	4.653	0.1036	Yes
4	SMAD4	5670519	72	4.465	0.1348	Yes
5	ANAPC4	4540338	147	3.854	0.1585	Yes
6	RBL1	3130372	151	3.829	0.1858	Yes
7	ORC6L	2260592	165	3.774	0.2121	Yes
8	CCNH	3190347	215	3.563	0.2350	Yes
9	MCM4	2760673 5420711	225	3.505	0.2597	Yes
10	SKP2	360711 380093 4810368	246	3.435	0.2832	Yes
11	PCNA	940754	337	3.090	0.3005	Yes
12	RB1	5900338	411	2.912	0.3175	Yes
13	MAD2L1	4480725	417	2.886	0.3379	Yes
14	GSK3B	5360348	510	2.696	0.3523	Yes
15	CCNE2	3120537	529	2.639	0.3702	Yes
16	CREBBP	5690035 7040050	535	2.625	0.3888	Yes
17	ORC5L	1940133 1940711	754	2.234	0.3930	Yes
18	CCNB1	4590433 4780372	841	2.121	0.4036	Yes
19	SMAD2	4200592	912	2.023	0.4143	Yes
20	ANAPC5	730164 7100685	922	2.010	0.4283	Yes
21	TFDP1	1980112	986	1.906	0.4385	Yes
22	CDKN1C	6520577	996	1.891	0.4516	Yes
23	BUB1B	1450288	1041	1.842	0.4625	Yes
24	HDAC1	2850670	1077	1.803	0.4735	Yes
25	CDC25A	3800184	1196	1.670	0.4791	Yes
26	YWHAQ	6760524	1207	1.661	0.4905	Yes
27	CUL1	1990632	1241	1.620	0.5003	Yes
28	MDM2	3450053 5080138	1273	1.581	0.5100	Yes
29	CDC16	1940706	1295	1.556	0.5200	Yes
30	CDKN2A	4670215 4760047	1438	1.404	0.5224	Yes
31	ATR	6860273	1459	1.381	0.5312	Yes
32	CCND3	380528 730500	1491	1.356	0.5393	Yes
33	MCM6	60092 540181 6510110	1526	1.312	0.5468	Yes
34	E2F1	5360093	1556	1.284	0.5545	Yes
35	YWHAZ	1230717	1558	1.283	0.5636	Yes
36	YWHAG	3780341	1591	1.251	0.5709	Yes
37	CCND2	5340167	1608	1.231	0.5789	Yes
38	CCNE1	110064	1670	1.172	0.5840	Yes
39	GADD45G	2510142	1766	1.097	0.5867	Yes
40	CDK2	130484 2260301 4010088 5050110	1778	1.088	0.5939	Yes
41	CDC7	4060546 4850041	1905	1.007	0.5943	Yes
42	RBX1	2120010 2340047	1998	0.965	0.5963	Yes
43	YWHAE	5310435	2086	0.911	0.5981	Yes
44	CDC14A	4050132	2143	0.881	0.6014	Yes
45	MCM3	5570068	2610	0.627	0.5807	No
46	MCM7	3290292 5220056	2662	0.607	0.5823	No
47	CDC6	4570296 5360600	2713	0.578	0.5838	No
48	E2F2	5270609 5570377 7000465	2918	0.493	0.5763	No
49	ORC3L	3060348	3016	0.456	0.5743	No
50	CCNA2	5290075	3056	0.440	0.5754	No
51	MAD1L1	5700035	3238	0.379	0.5683	No
52	E2F3	50162 460180	3320	0.350	0.5664	No
53	WEE1	3390070	3430	0.317	0.5628	No
54	CDC45L	70537 3130114	3466	0.305	0.5631	No
55	GADD45B	2350408	3576	0.272	0.5592	No
56	RBL2	580446 1400670	3592	0.267	0.5603	No
57	YWHAH	1660133 2810053	3653	0.251	0.5589	No
58	CDKN1A	4050088 6400706	3730	0.231	0.5564	No
59	ORC2L	1990470 6510019	3731	0.231	0.5581	No
60	CDK6	4920253	3755	0.226	0.5584	No
61	CHEK1	50167 1940300	3941	0.188	0.5498	No
62	ABL1	1050593 2030050 4010114	3953	0.186	0.5505	No
63	CDC23	3190593	3954	0.186	0.5519	No
64	ORC4L	4230538 5550288	3986	0.180	0.5515	No
65	CDKN2B	6020040	4239	0.141	0.5389	No
66	CDC14B	2320497 3360162	5503	0.055	0.4711	No
67	CDC25C	2570673 4760161 6520707	6003	0.040	0.4444	No
68	TGFB2	4920292	6193	0.034	0.4344	No
69	SMC1B	2450397	6515	0.027	0.4173	No
70	TGFB3	1070041	6952	0.017	0.3939	No
71	CCNB2	6510528	6991	0.017	0.3919	No
72	CCNA1	6290113	7918	0.000	0.3419	No
73	PRKDC	1400072 4230541	9467	-0.026	0.2585	No
74	ATM	3610110 4050524	10515	-0.048	0.2023	No
75	CDK7	2640451	11047	-0.060	0.1740	No
76	ANAPC10	870086 1170037 2260129	11439	-0.072	0.1534	No
77	SFN	6290301 7510608	11872	-0.087	0.1307	No
78	MCM2	5050139	11994	-0.092	0.1248	No
79	CCNB3	3360600	12623	-0.124	0.0918	No
80	PLK1	1780369 2640121	12890	-0.143	0.0785	No
81	ANAPC11	1780601	13373	-0.179	0.0537	No
82	BUB1	5390270	13543	-0.197	0.0460	No
83	GADD45A	2900717	14582	-0.346	-0.0076	No
84	CCND1	460524 770309 3120576 6980398	14927	-0.419	-0.0232	No
85	CDKN2C	5050750 5130148	15096	-0.464	-0.0289	No
86	TGFB1	1940162	15204	-0.500	-0.0311	No
87	CDKN1B	3800025 6450044	15233	-0.512	-0.0289	No
88	CHEK2	610139 1050022	15235	-0.512	-0.0253	No
89	MCM5	2680647	15984	-0.836	-0.0597	No
90	CDC26	5570279	16103	-0.902	-0.0596	No
91	SMC1A	3060600 5700148 5890113 6370154	16276	-1.001	-0.0617	No
92	ORC1L	2370328 6110390	16632	-1.219	-0.0722	No
93	FZR1	6220504 6660670	16735	-1.294	-0.0684	No
94	CDKN2D	6040035	16870	-1.413	-0.0655	No
95	SMAD3	6450671	17349	-1.764	-0.0787	No
96	ANAPC2	6660438	17382	-1.790	-0.0676	No
97	TP53	6130707	17437	-1.852	-0.0572	No
98	PTTG1	520463	17502	-1.903	-0.0470	No
99	CDK4	540075 4540600	17551	-1.953	-0.0356	No
100	MAD2L2	1240358	17792	-2.237	-0.0325	No
101	CDC20	3440017 3440044 6220088	17846	-2.302	-0.0189	No
102	BUB3	3170546	17989	-2.521	-0.0085	No
103	ANAPC7	5260274	18170	-2.815	0.0020	No
104	CDC25B	6940102	18270	-3.071	0.0187	No