Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_02_BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus_repos |
| Phenotype | phenotype_BT_ATM_minus_versus_ATM_plus.cls#BT_ATM_minus_versus_ATM_plus_repos |
| Upregulated in class | ATM_plus |
| GeneSet | RESPONSE_TO_LIGHT_STIMULUS |
| Enrichment Score (ES) | -0.57922006 |
| Normalized Enrichment Score (NES) | -1.9052513 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.17976868 |
| FWER p-Value | 0.376 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | COPS3 | 1416678_at 1441156_at 1443570_at 1458259_x_at | 275 | 1.725 | 0.0454 | No | ||
| 2 | ERCC6 | 1441595_at 1442604_at | 596 | 1.347 | 0.0761 | No | ||
| 3 | MAPK8 | 1420931_at 1420932_at 1437045_at 1440856_at 1457936_at | 3414 | 0.576 | -0.0332 | No | ||
| 4 | POLD1 | 1448187_at 1456055_x_at | 4981 | 0.393 | -0.0915 | No | ||
| 5 | OPN1SW | 1418552_at 1449132_at | 5096 | 0.381 | -0.0839 | No | ||
| 6 | CDKN2D | 1416253_at | 6426 | 0.267 | -0.1356 | No | ||
| 7 | ERCC2 | 1460727_at | 6573 | 0.255 | -0.1337 | No | ||
| 8 | FEN1 | 1421731_a_at 1436454_x_at | 6596 | 0.253 | -0.1262 | No | ||
| 9 | CLOCK | 1418659_at 1435775_at 1439314_at | 11260 | -0.054 | -0.3374 | No | ||
| 10 | PDE6B | 1419740_at | 11444 | -0.065 | -0.3436 | No | ||
| 11 | SAG | 1419025_at | 11651 | -0.078 | -0.3504 | No | ||
| 12 | OPN4 | 1421584_at | 12010 | -0.099 | -0.3634 | No | ||
| 13 | ERCC8 | 1427194_a_at 1429439_at 1432249_a_at 1454176_at | 12053 | -0.102 | -0.3619 | No | ||
| 14 | GPX1 | 1460671_at | 12601 | -0.136 | -0.3823 | No | ||
| 15 | ABCA4 | 1449588_at | 12828 | -0.151 | -0.3875 | No | ||
| 16 | PDC | 1449179_at | 12930 | -0.157 | -0.3869 | No | ||
| 17 | RHO | 1425171_at 1425172_at 1451617_at 1451618_at | 13263 | -0.178 | -0.3960 | No | ||
| 18 | DYNLRB1 | 1428257_s_at | 13369 | -0.185 | -0.3946 | No | ||
| 19 | GRK1 | 1421361_at | 13712 | -0.209 | -0.4032 | No | ||
| 20 | TRPC3 | 1417577_at | 13753 | -0.211 | -0.3979 | No | ||
| 21 | CACNA1F | 1449955_at | 14003 | -0.228 | -0.4016 | No | ||
| 22 | IVL | 1422222_at 1439878_at | 16287 | -0.401 | -0.4924 | No | ||
| 23 | BRSK1 | 1439892_at | 16630 | -0.431 | -0.4935 | No | ||
| 24 | MC1R | 1422069_at | 16671 | -0.435 | -0.4807 | No | ||
| 25 | RELA | 1419536_a_at | 18597 | -0.667 | -0.5462 | No | ||
| 26 | NF1 | 1438067_at 1441523_at 1443097_at 1452525_a_at | 18721 | -0.687 | -0.5287 | No | ||
| 27 | NR2E3 | 1423631_at | 19827 | -0.891 | -0.5493 | Yes | ||
| 28 | ELA2 | 1422928_at | 19838 | -0.893 | -0.5197 | Yes | ||
| 29 | ERCC5 | 1450935_at 1457713_at | 19931 | -0.915 | -0.4931 | Yes | ||
| 30 | DDB2 | 1425706_a_at 1436680_s_at | 20045 | -0.944 | -0.4665 | Yes | ||
| 31 | UBE4B | 1432499_a_at 1444465_at 1448410_at | 20236 | -0.993 | -0.4418 | Yes | ||
| 32 | IL12B | 1419530_at 1449497_at | 20298 | -1.004 | -0.4108 | Yes | ||
| 33 | ERCC3 | 1448497_at | 20308 | -1.006 | -0.3774 | Yes | ||
| 34 | IL12A | 1425454_a_at | 20338 | -1.011 | -0.3448 | Yes | ||
| 35 | GTF2H2 | 1450701_a_at 1457818_at | 20468 | -1.041 | -0.3157 | Yes | ||
| 36 | UNC119 | 1418123_at | 20725 | -1.123 | -0.2896 | Yes | ||
| 37 | FECH | 1418698_a_at 1418699_s_at 1427696_at 1449181_at | 21291 | -1.453 | -0.2665 | Yes | ||
| 38 | ERCC4 | 1432272_a_at 1440237_at 1441003_at 1448984_at | 21358 | -1.513 | -0.2187 | Yes | ||
| 39 | SCARA3 | 1427020_at | 21557 | -1.730 | -0.1696 | Yes | ||
| 40 | PITPNM1 | 1425760_a_at 1437724_x_at 1438854_x_at 1438974_x_at | 21679 | -2.006 | -0.1076 | Yes | ||
| 41 | BCL3 | 1418133_at | 21891 | -3.545 | 0.0020 | Yes |
