Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_02_BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus_repos |
| Phenotype | phenotype_BT_ATM_minus_versus_ATM_plus.cls#BT_ATM_minus_versus_ATM_plus_repos |
| Upregulated in class | BT_ATM_minus |
| GeneSet | RESPONSE_TO_HYPOXIA |
| Enrichment Score (ES) | 0.48108304 |
| Normalized Enrichment Score (NES) | 1.4953706 |
| Nominal p-value | 0.041763343 |
| FDR q-value | 0.9873146 |
| FWER p-Value | 1.0 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | SMAD3 | 1450471_at 1450472_s_at 1454960_at | 208 | 1.878 | 0.0996 | Yes | ||
| 2 | ALAS2 | 1451675_a_at | 402 | 1.576 | 0.1824 | Yes | ||
| 3 | HIF1A | 1427418_a_at 1431981_at 1448183_a_at 1457231_at | 561 | 1.374 | 0.2550 | Yes | ||
| 4 | EGLN1 | 1423785_at 1443389_at 1451110_at | 582 | 1.354 | 0.3328 | Yes | ||
| 5 | PLOD2 | 1416686_at 1416687_at | 971 | 1.106 | 0.3793 | Yes | ||
| 6 | HSP90B1 | 1415889_a_at 1438040_a_at | 1697 | 0.926 | 0.4000 | Yes | ||
| 7 | EP300 | 1434765_at | 2203 | 0.808 | 0.4239 | Yes | ||
| 8 | TGFB2 | 1423250_a_at 1438303_at 1446141_at 1450922_a_at 1450923_at | 2585 | 0.723 | 0.4485 | Yes | ||
| 9 | CHRNA4 | 1421202_at 1421203_at 1456354_at | 2751 | 0.690 | 0.4811 | Yes | ||
| 10 | CD24 | 1416034_at 1437502_x_at 1448182_a_at | 5018 | 0.389 | 0.4002 | No | ||
| 11 | NARFL | 1450452_a_at | 8247 | 0.136 | 0.2608 | No | ||
| 12 | CHRNA7 | 1440681_at 1450299_at | 8872 | 0.098 | 0.2380 | No | ||
| 13 | MT3 | 1420575_at | 9516 | 0.057 | 0.2120 | No | ||
| 14 | CLDN3 | 1426332_a_at 1434651_a_at 1451701_x_at 1453258_at 1460569_x_at | 11020 | -0.040 | 0.1457 | No | ||
| 15 | PLOD1 | 1416289_at 1445893_at | 11762 | -0.085 | 0.1168 | No | ||
| 16 | BNIP3 | 1422470_at | 13233 | -0.176 | 0.0599 | No | ||
| 17 | EGLN2 | 1416533_at | 13665 | -0.206 | 0.0522 | No | ||
| 18 | CHRNB2 | 1420744_at 1436428_at 1441837_at | 15197 | -0.314 | 0.0006 | No | ||
| 19 | PDIA2 | 1428952_at | 16251 | -0.398 | -0.0243 | No | ||
| 20 | SMAD4 | 1422485_at 1422486_a_at 1422487_at 1444205_at | 16825 | -0.450 | -0.0243 | No | ||
| 21 | ARNT2 | 1420669_at 1420670_at 1434028_at 1446894_at | 17571 | -0.529 | -0.0276 | No | ||
| 22 | CXCR4 | 1448710_at | 17598 | -0.531 | 0.0021 | No | ||
| 23 | PML | 1448757_at 1456103_at 1459137_at | 18538 | -0.658 | -0.0025 | No | ||
| 24 | NF1 | 1438067_at 1441523_at 1443097_at 1452525_a_at | 18721 | -0.687 | 0.0291 | No | ||
| 25 | EPAS1 | 1435436_at 1449888_at | 19196 | -0.765 | 0.0519 | No | ||
| 26 | CREBBP | 1434633_at 1435224_at 1436983_at 1444856_at 1457641_at 1459804_at | 21006 | -1.257 | 0.0424 | No |
