DatasetSet_02_BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls
#BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls
#BT_ATM_minus_versus_ATM_plus_repos
Phenotypephenotype_BT_ATM_minus_versus_ATM_plus.cls#BT_ATM_minus_versus_ATM_plus_repos
Upregulated in classATM_plus
GeneSetMAPKKK_CASCADE_GO_0000165
Enrichment Score (ES)-0.4784316
Normalized Enrichment Score (NES)-1.8488423
Nominal p-value0.0
FDR q-value0.116214246
FWER p-Value0.637
Table: GSEA Results Summary



Fig 1: Enrichment plot: MAPKKK_CASCADE_GO_0000165   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CRKL1421953_at 1421954_at 1425604_at 1436950_at1222.2390.0288No
2MAP2K41426233_at 1442679_at 1451982_at5971.3460.0278No
3SOD11435304_at 1440222_at 1440896_at 1451124_at 1459976_s_at6931.2780.0431No
4GRM41457299_at16190.9430.0153No
5MDFIC1427040_at16410.9380.0287No
6MBIP1424405_at21630.8180.0175No
7DUSP101417163_at 1417164_at22410.7990.0262No
8ADORA2B1434430_s_at 1434431_x_at 1434772_at 1450214_at25030.7410.0257No
9AMBP1416649_at28580.6720.0198No
10MAP2K71421416_at 1425393_a_at 1425512_at 1425513_at 1440442_at 1451736_a_at 1457182_at29200.6620.0272No
11MAPK81420931_at 1420932_at 1437045_at 1440856_at 1457936_at34140.5760.0135No
12SPRED21423001_at 1434403_at 1436892_at 1441415_at 1441802_at40230.496-0.0068No
13MAP3K101436373_at 1440500_at 1457456_at 1458651_at41160.482-0.0036No
14MAP4K31444406_at45870.431-0.0184No
15MAP3K91432981_at 1442218_at 1455684_at 1458922_at45930.431-0.0120No
16MAP3K21422250_at47670.414-0.0136No
17MAP4K51427083_a_at 1427084_a_at 1427376_a_at 1440059_at 1445426_at 1446348_at 1447204_at48360.406-0.0105No
18CD241416034_at 1437502_x_at 1448182_a_at50180.389-0.0128No
19MAPK8IP11425679_a_at 1440619_at52860.364-0.0194No
20FGFR31421841_at 1425796_a_at53640.356-0.0175No
21MAPK91421876_at 1421877_at 1421878_at56670.330-0.0262No
22TNIK1443802_at56910.327-0.0222No
23FGF131418497_at 1418498_at70360.220-0.0804No
24SHC11422853_at 1422854_at75990.182-0.1033No
25DUSP81418714_at79240.159-0.1157No
26MAP3K61449901_a_at84420.124-0.1375No
27CHRNA71440681_at 1450299_at88720.098-0.1556No
28TRAF71424320_a_at93150.069-0.1748No
29NRTN1449281_at97290.043-0.1930No
30MAP3K131430137_at 1440749_at 1447699_at97470.042-0.1932No
31FPR11450808_at97860.040-0.1943No
32ADRB31421555_at 1455918_at103810.001-0.2215No
33EDG51428176_at 1447880_x_at10692-0.017-0.2354No
34FGFR11424050_s_at 1425911_a_at 1436551_at11314-0.057-0.2630No
35FGF21449826_a_at11530-0.070-0.2717No
36EGF1418093_a_at11572-0.072-0.2725No
37MAPK8IP21418785_at 1418786_at 1435045_s_at 1449225_a_at 1455194_at11953-0.096-0.2884No
38CCM21434648_a_at 1434649_at 1456290_x_at 1457339_at12115-0.105-0.2942No
39GNG31417428_at12143-0.107-0.2938No
40PKN11458674_at 1459231_at12213-0.112-0.2952No
41PROK21419681_a_at 1426176_a_at 1451952_at12309-0.118-0.2977No
42SCG21450708_at12590-0.135-0.3085No
43MAP3K111450669_at13441-0.190-0.3445No
44PIK3CB1445731_at 1453069_at13458-0.191-0.3423No
45MAP3K121417115_at 1438908_at 1456565_s_at13607-0.201-0.3460No
46GPS11415699_a_at13867-0.219-0.3544No
47MAPK101437195_x_at 1448342_at 1458002_at 1458062_at 1458513_at13942-0.224-0.3544No
48ADRA2A1423022_at 1433600_at 1433601_at13962-0.226-0.3518No
49GHRL1448980_at14238-0.244-0.3606No
50TPD52L11418412_at14274-0.247-0.3584No
51TGFA1421942_s_at 1450421_at14563-0.268-0.3675No
52MAPK8IP31416437_a_at 1425975_a_at 1436676_at 1460628_at14964-0.297-0.3812No
53DAXX1419026_at15027-0.302-0.3794No
54ATP6AP21423662_at 1437688_x_at 1439456_x_at15364-0.326-0.3898No
55MDFI1420713_a_at 1425924_at15751-0.355-0.4020No
56TDGF11450989_at15863-0.365-0.4015No
57PLCE11452398_at16167-0.391-0.4094No
58MAPKAPK21426648_at16184-0.392-0.4041No
59C5AR11422190_at 1439902_at16283-0.400-0.4024No
60TAOK21438208_at 1443642_at 1456826_at16503-0.422-0.4059No
61DUSP221441723_at 1448985_at16601-0.429-0.4038No
62GPS21417796_at16851-0.454-0.4082No
63ADRA2C1422335_at 1435296_at 1439762_x_at 1457328_at16924-0.461-0.4044No
64CXCR41448710_at17598-0.531-0.4271No
65NF11438067_at 1441523_at 1443097_at 1452525_a_at18721-0.687-0.4679Yes
66PAK11420979_at 1420980_at 1450070_s_at 1459029_at18935-0.719-0.4666Yes
67MAP4K21428297_at 1434833_at 1450244_a_at18979-0.727-0.4574Yes
68SPRED11423160_at 1423161_s_at 1423162_s_at 1428777_at 1441517_at 1442859_at 1443652_x_at 1445228_at 1452911_at 1460116_s_at18988-0.728-0.4465Yes
69CD811416330_at19177-0.760-0.4435Yes
70MINK11449362_a_at19474-0.816-0.4445Yes
71CARTPT1422825_at19522-0.825-0.4340Yes
72HIPK21424863_a_at 1424864_at 1425983_x_at 1428433_at 1429566_a_at 1432523_at 1446167_at 1448631_a_at 1456022_at 1458520_at19583-0.838-0.4238Yes
73PTPLAD11433706_a_at 1452427_s_at 1454698_at19826-0.891-0.4212Yes
74EDA2R1440085_at19878-0.902-0.4097Yes
75RGS41416286_at 1416287_at 1448285_at20211-0.984-0.4097Yes
76DBNL1460334_at20352-1.014-0.4006Yes
77MAP3K7IP11426898_at 1447692_x_at20534-1.058-0.3926Yes
78DUSP91433844_a_at 1433845_x_at 1454737_at20882-1.193-0.3901Yes
79MAP3K41421450_a_at 1447667_x_at 1450253_a_at 1459800_s_at20890-1.200-0.3720Yes
80TAOK31435964_a_at 1444366_at 1444881_at 1447257_at 1455733_at20892-1.200-0.3536Yes
81CAMKK21424474_a_at 1424475_at 1424476_at 1455401_at20973-1.243-0.3382Yes
82MAP3K31426686_s_at 1426687_at 1436522_at21119-1.317-0.3245Yes
83GADD45G1453851_a_at21192-1.365-0.3069Yes
84LAX11438687_at21276-1.443-0.2885Yes
85MADD1425735_at 1455502_at21306-1.464-0.2673Yes
86ADRB21437302_at21407-1.565-0.2478Yes
87SH2D3C1415886_at21603-1.823-0.2287Yes
88DUSP161418401_a_at 1440615_at 1440651_at21660-1.940-0.2015Yes
89DUSP21450698_at21696-2.054-0.1715Yes
90GADD45B1420197_at 1449773_s_at 1450971_at21794-2.532-0.1370Yes
91DUSP41428834_at21811-2.663-0.0968Yes
92RGS31425701_a_at 1427648_at 1449516_a_at 1454026_a_at21839-2.911-0.0533Yes
93DUSP61415834_at21907-3.7490.0012Yes
Table: GSEA details [plain text format]



Fig 2: MAPKKK_CASCADE_GO_0000165   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: MAPKKK_CASCADE_GO_0000165: Random ES distribution   
Gene set null distribution of ES for MAPKKK_CASCADE_GO_0000165