Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_02_BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus_repos |
| Phenotype | phenotype_BT_ATM_minus_versus_ATM_plus.cls#BT_ATM_minus_versus_ATM_plus_repos |
| Upregulated in class | ATM_plus |
| GeneSet | COLLAGEN_BINDING |
| Enrichment Score (ES) | -0.7373769 |
| Normalized Enrichment Score (NES) | -1.780885 |
| Nominal p-value | 0.010695187 |
| FDR q-value | 0.21160495 |
| FWER p-Value | 0.901 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | LUM | 1423607_at | 4489 | 0.441 | -0.1573 | No | ||
| 2 | ITGA10 | 1440235_at | 4762 | 0.414 | -0.1252 | No | ||
| 3 | ITGA1 | 1439713_at 1446569_at 1455251_at | 5881 | 0.310 | -0.1429 | No | ||
| 4 | ACHE | 1422635_at | 6529 | 0.258 | -0.1447 | No | ||
| 5 | SPARC | 1416589_at 1448392_at 1458204_at | 7293 | 0.202 | -0.1577 | No | ||
| 6 | NID2 | 1423516_a_at | 8833 | 0.100 | -0.2172 | No | ||
| 7 | ITGA2 | 1450501_at | 11591 | -0.073 | -0.3351 | No | ||
| 8 | USH2A | 1421697_at 1431750_at 1445972_at | 12723 | -0.144 | -0.3712 | No | ||
| 9 | DSPP | 1422246_at | 13857 | -0.219 | -0.3994 | No | ||
| 10 | VWF | 1435386_at | 21268 | -1.434 | -0.5832 | Yes | ||
| 11 | MMP9 | 1416298_at 1448291_at | 21927 | -5.707 | 0.0003 | Yes |
