DatasetSet_02_BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls
#BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls
#BT_ATM_minus_versus_ATM_plus_repos
Phenotypephenotype_BT_ATM_minus_versus_ATM_plus.cls#BT_ATM_minus_versus_ATM_plus_repos
Upregulated in classBT_ATM_minus
GeneSetV$STAT4_01
Enrichment Score (ES)0.27257922
Normalized Enrichment Score (NES)1.2287666
Nominal p-value0.049689442
FDR q-value0.5397469
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: V$STAT4_01   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1HIPK31419191_at 1426819_at233.0320.0262Yes
2SLC38A21426722_at 1429593_at 1429594_at472.5620.0482Yes
3CITED21417129_a_at 1421267_a_at 1439915_at 1440091_at 1443561_at 1443926_at 1445638_at 1446176_at 1447861_x_at 1457632_s_at 1459301_at732.4250.0688Yes
4UBE2D31423112_at 1423113_a_at 1423114_at 1450858_a_at 1450859_s_at 1455479_a_at 1455480_s_at772.4210.0904Yes
5MEF2C1421027_a_at 1421028_a_at 1424852_at 1439946_at 1445420_at 1446484_at 1451506_at 1451507_at 1458551_at842.4050.1118Yes
6NDFIP11424820_a_at 1424821_at 1451493_at1352.1670.1290Yes
7EML41429612_at 1447838_x_at3161.6550.1356Yes
8ERG1425370_a_at 1440244_at3221.6500.1502Yes
9HNRPD1425142_a_at 1446083_at3401.6290.1640Yes
10VSNL11420955_at 1450055_at3801.6020.1766Yes
11CACNA1E1421692_at4901.4660.1848Yes
12RNF1381419368_a_at 1419369_at 1454064_a_at8071.1970.1810Yes
13PRKCH1422079_at 1434248_at8411.1720.1900Yes
14POU4F11429667_at 1429668_at8431.1720.2005Yes
15ETS11422027_a_at 1422028_a_at 1426725_s_at 1452163_at9131.1370.2076Yes
16AP4E11440261_at 1456948_at12041.0310.2035Yes
17RBMS11418703_at 1434005_at 1441437_at 1458578_at 1459968_at12151.0270.2123Yes
18ANKRD281434630_at 1454801_at12881.0120.2181Yes
19PITPNC11428025_s_at 1428878_a_at 1428879_at 1431074_a_at 1435066_at 1441574_at 1452939_a_at 1452940_x_at 1453750_x_at 1455204_at13051.0090.2264Yes
20EXTL21422538_at 1422539_at13221.0060.2347Yes
21CXXC41437351_at 1438304_at 1456811_at13530.9990.2423Yes
22TRERF11444654_at15070.9670.2440Yes
23GRID21421435_at 1421436_at 1435487_at 1437824_at 1443101_at 1446879_at 1458756_at 1459245_s_at15590.9570.2502Yes
24CTSK1450652_at16390.9390.2550Yes
25LEPROTL11423552_at 1451018_at17430.9140.2585Yes
26DOCK41431114_at 1436405_at 1441462_at 1441469_at 1446283_at 1457146_at 1459279_at19020.8780.2591Yes
27LRRC161446892_at 1451804_a_at19340.8710.2655Yes
28TOM1L11439337_at 1451117_a_at21370.8250.2637Yes
29LIMK21418581_a_at 1439896_at 1452060_a_at 1458628_at22260.8030.2668Yes
30CHD61427384_at 1431047_at23800.7680.2667Yes
31RHOJ1418892_at 1444982_at25860.7230.2638Yes
32PRKCB11423478_at 1438981_at 1443144_at 1459674_at 1460419_a_at28480.6740.2578Yes
33CASKIN21450691_at28810.6680.2624Yes
34NEXN1435649_at 1446084_at29160.6620.2668Yes
35MAP2K71421416_at 1425393_a_at 1425512_at 1425513_at 1440442_at 1451736_a_at 1457182_at29200.6620.2726Yes
36SATB11416007_at 1416008_at 1439203_at 1439449_at 1443284_at 1456902_at32170.6080.2644No
37FEV1425886_at35440.5560.2544No
38PPARGC1A1434099_at 1434100_x_at 1437751_at 1456395_at 1460336_at37310.5310.2507No
39HOXB91452317_at39320.5070.2460No
40ACBD61452601_a_at 1453199_at41500.4790.2403No
41LPL1415904_at43520.4570.2352No
42ANGPTL11421421_at 1421791_at 1446396_at 1455224_at44620.4440.2342No
43NUDT41418505_at 1449107_at45070.4390.2361No
44A2BP11418314_a_at 1438217_at 1447735_x_at 1455358_at 1456921_at46130.4290.2351No
45TNFRSF191415921_a_at 1425212_a_at 1427600_at 1445949_at 1448147_at48230.4080.2292No
46PCDH11452294_at48390.4060.2321No
47HTR3B1421652_at49850.3920.2290No
48UBL31423461_a_at50680.3840.2287No
49CRYGB1427264_at52200.3700.2251No
50PIK3C2G1421704_a_at53830.3550.2208No
51FLT11419300_at 1440926_at 1451756_at 1454037_a_at55030.3440.2184No
52VAV31417122_at 1417123_at 1446795_at 1448600_s_at 1458630_at55220.3430.2207No
53SMOX1424268_at 1446509_at56240.3330.2190No
54TLL11420753_at61030.2920.1997No
55SLC36A21436521_at62420.2810.1959No
56PAX81418208_at 1446561_at62590.2800.1976No
57GNB21450623_at63770.2710.1947No
58CA31430584_s_at 1449434_at 1453588_at 1460256_at66850.2470.1828No
59NEDD41421955_a_at 1444044_at 1450431_a_at 1451109_a_at67200.2450.1834No
60CPEB41420617_at 1420618_at 1449931_at67420.2430.1847No
61OSR11449350_at67430.2430.1868No
62TDRD91453357_at70920.2160.1728No
63HOXC131425874_at71830.2100.1705No
64ARPC21437148_at 1442295_at72670.2040.1685No
65PHTF11449148_a_at73420.1990.1669No
66GPRC5D1420538_at75210.1870.1604No
67CSPG41423341_at 1450944_at77020.1740.1537No
68STIM21434219_at 1444185_at77420.1720.1535No
69HHEX1423319_at78390.1650.1505No
70NRAS1422688_a_at 1454060_a_at79390.1590.1474No
71OSGEPL11428557_a_at 1428558_at 1435127_a_at 1439715_at80530.1500.1435No
72ZDHHC81436468_at 1451476_at81790.1410.1391No
73TAPBPL1424961_at 1451544_at82120.1390.1388No
74HOXC61427361_at 1427362_x_at 1427454_at82750.1340.1372No
75TRPC4AP1441184_at 1460720_at83010.1330.1373No
76AAK11420026_at 1435038_s_at 1441782_at83780.1280.1349No
77OPRM11425432_at 1441791_at 1451705_a_at 1451709_at 1459402_at83900.1270.1355No
78DRD1IP1428813_a_at84380.1240.1345No
79ARRDC31454617_at86160.1130.1274No
80FN11426642_at 1437218_at86710.1090.1259No
81ADNP1423069_at87470.1040.1234No
82NFAT51426029_a_at 1438999_a_at 1439328_at 1439805_at 1448966_a_at 1451921_a_at 1458213_at87610.1040.1237No
83LAT1460651_at88060.1010.1226No
84PKP41438677_at 1452209_at90600.0860.1117No
85ITGA81427489_at 1454966_at91700.0790.1074No
86CMYA51427312_at94900.0590.0933No
87BMP51421282_at 1421283_at 1444470_x_at 1455851_at95710.0540.0901No
88VIT1426231_at98820.0330.0761No
89PITX21424797_a_at 1450482_a_at101730.0140.0629No
90IL211450334_at102730.0090.0584No
91FGF101420690_at10427-0.0010.0514No
92GRIA11435239_at 1448972_at 1458285_at10538-0.0080.0464No
93EDG51428176_at 1447880_x_at10692-0.0170.0395No
94CD3D1422828_at11144-0.0460.0192No
95PTK71452589_at11149-0.0470.0195No
96TTYH21421179_at 1434500_at 1447088_at11209-0.0510.0172No
97MITF1422025_at 1455214_at11218-0.0520.0173No
98CLOCK1418659_at 1435775_at 1439314_at11260-0.0540.0159No
99CISH1448724_at11304-0.0570.0144No
100SDCBP1423332_at 1430528_at11361-0.0600.0124No
101HOXD81431099_at 1433638_s_at11486-0.0680.0073No
102EGF1418093_a_at11572-0.0720.0040No
103RIN21426368_at 1441209_at 1442829_at11734-0.083-0.0026No
104TWIST11418733_at11770-0.085-0.0035No
105IGF11419519_at 1436497_at 1437401_at 1452014_a_at11916-0.094-0.0093No
106CENTA11433556_at12136-0.106-0.0184No
107TBC1D171423659_a_at12537-0.133-0.0356No
108TCF151449592_at12561-0.134-0.0354No
109ZFHX1B1422748_at 1434298_at 1442393_at 1445518_at 1454200_at 1456389_at12573-0.135-0.0347No
110SLC26A31421445_at 1427547_a_at 1429467_s_at 1453151_at12589-0.135-0.0342No
111GPX11460671_at12601-0.136-0.0335No
112SOSTDC11449340_at 1460250_at12751-0.146-0.0390No
113EDN11451924_a_at12943-0.158-0.0464No
114CSRP31460318_at13049-0.164-0.0498No
115STAB11450199_a_at13155-0.171-0.0531No
116BZW11423040_at 1423041_a_at 1450845_a_at 1450846_at13199-0.174-0.0535No
117NOTCH41436901_at 1449146_at 1456263_at13330-0.182-0.0578No
118RUNX21424704_at 1425389_a_at 1426034_a_at13408-0.188-0.0597No
119CTNNB11420811_a_at 1430533_a_at 1450008_a_at13598-0.201-0.0666No
120NRG11456524_at13601-0.201-0.0648No
121CSF3R1418806_at13642-0.204-0.0648No
122MAPK101437195_x_at 1448342_at 1458002_at 1458062_at 1458513_at13942-0.224-0.0766No
123FEM1C1428890_at 1438075_at14047-0.231-0.0793No
124POU3F31422331_at 1435197_at14172-0.239-0.0828No
125EPM2A1421553_at 1439677_at14315-0.249-0.0871No
126CPA31448730_at14385-0.255-0.0880No
127STMN21423280_at 1423281_at14450-0.259-0.0886No
128BCL6B1418421_at14615-0.273-0.0937No
129USP21417168_a_at 1417169_at14819-0.287-0.1005No
130MYL31427768_s_at 1427769_x_at 1428266_at14909-0.293-0.1019No
131YARS1460638_at15189-0.313-0.1119No
132HOXD101418606_at15240-0.318-0.1114No
133GIF1419020_at15251-0.318-0.1090No
134LGI11423183_at 1435851_at15297-0.322-0.1082No
135ZF1425698_a_at 1438302_at 1452856_at 1452857_at15512-0.338-0.1150No
136FGF121440270_at 1451693_a_at 1460137_at15527-0.338-0.1126No
137MRPL241428709_a_at15640-0.347-0.1146No
138PRDM101441764_at 1444812_at15661-0.349-0.1124No
139PHOX2B1422232_at 1455907_x_at15743-0.354-0.1129No
140PDE6D1416843_at15838-0.363-0.1140No
141EVI11423011_at 1438325_at15952-0.374-0.1158No
142POLR1D1447320_x_at 1448287_at 1451120_at 1459657_s_at15957-0.374-0.1126No
143PRCC1449250_at15971-0.375-0.1099No
144GREM11425357_a_at16054-0.381-0.1102No
145JMJD1C1426900_at 1439998_at 1441592_at 1448049_at 1458521_at16149-0.389-0.1110No
146MPO1415960_at16160-0.390-0.1080No
147GSC1421412_at16587-0.428-0.1237No
148HOXB31427605_at 1456229_at16640-0.433-0.1222No
149STAT5A1421469_a_at 1450259_a_at16987-0.467-0.1339No
150DHH1422127_at 1434959_at17062-0.475-0.1331No
151SESTD11429114_at 1455549_at17110-0.480-0.1309No
152RHOQ1427918_a_at 1440925_at17204-0.489-0.1308No
153BLNK1451780_at17243-0.494-0.1281No
154HOXB41451761_at 1460379_at17824-0.559-0.1497No
155SLMAP1421215_a_at 1426457_at 1426458_at17918-0.573-0.1489No
156RAB1B1424064_at17953-0.577-0.1453No
157HNF4G1422182_at 1450518_at 1460127_at18001-0.583-0.1422No
158PBX11430183_at 1440037_at 1440954_at 1442846_at 1449542_at 1458853_at18265-0.619-0.1487No
159NCAM11421966_at 1425126_at 1426864_a_at 1426865_a_at 1439556_at 1440067_at 1441995_at 1442680_at 1443018_at 1450437_a_at 1450438_at 1454140_at18333-0.627-0.1461No
160CACNG31450520_at18427-0.641-0.1447No
161AP1G21419113_at18828-0.702-0.1568No
162MAP4K21428297_at 1434833_at 1450244_a_at18979-0.727-0.1571No
163FGF81451882_a_at19222-0.771-0.1613No
164HSPB71421289_at 1421290_at 1434927_at19264-0.778-0.1562No
165TNKS1BP11427051_at19294-0.783-0.1505No
166LNX21460249_at19297-0.784-0.1435No
167MTUS11436501_at 1436502_at 1445939_at 1454824_s_at 1458834_at19376-0.796-0.1400No
168CALR1417606_a_at 1433806_x_at 1456170_x_at19589-0.839-0.1422No
169MBNL11416904_at 1439686_at 1440315_at 1445106_at 1457924_at19632-0.847-0.1365No
170HSD11B11449038_at19793-0.883-0.1359No
171GRIN2B1422223_at 1431700_at20100-0.957-0.1414No
172ERF1422114_at 1435561_at20175-0.974-0.1360No
173SHOX21420559_a_at 1438042_at20450-1.036-0.1393No
174SAP1301428857_at20494-1.048-0.1319No
175PHF151430081_at 1455345_at20520-1.054-0.1236No
176ACTN11427385_s_at 1428585_at 1452415_at20612-1.081-0.1180No
177PDE4D1443289_at 1458212_at 1459289_at 1459311_at20641-1.089-0.1095No
178AKT1S11428158_at 1437736_at 1452684_at20920-1.217-0.1114No
179FANK11419566_at 1419567_at 1447495_at 1447496_s_at21094-1.306-0.1076No
180FEZ21434348_at21129-1.324-0.0972No
181FLI11422024_at 1433512_at 1441584_at21162-1.346-0.0866No
182NMNAT31424899_at 1432342_at 1443149_at 1459128_at21163-1.346-0.0745No
183RUNX31421467_at 1440275_at21228-1.400-0.0649No
184SGK1416041_at21376-1.525-0.0579No
185BDNF1422168_a_at 1422169_a_at21424-1.580-0.0459No
186GPHN1426462_at 1426463_at 1430038_at 1444869_at 1445188_at 1458242_at21518-1.682-0.0350No
187PDLIM21423946_at21685-2.019-0.0245No
188NR4A11416505_at21917-3.9960.0008No
Table: GSEA details [plain text format]



Fig 2: V$STAT4_01   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: V$STAT4_01: Random ES distribution   
Gene set null distribution of ES for V$STAT4_01