Details for gene set V$SRF_Q5

Table: GSEA Results Summary

Dataset	Set_02_BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_BT_ATM_minus_versus_ATM_plus.cls#BT_ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$SRF_Q5_01
Enrichment Score (ES)	-0.42647323
Normalized Enrichment Score (NES)	-1.7821187
Nominal p-value	0.0
FDR q-value	0.027794162
FWER p-Value	0.121

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CITED2	1417129_a_at 1421267_a_at 1439915_at 1440091_at 1443561_at 1443926_at 1445638_at 1446176_at 1447861_x_at 1457632_s_at 1459301_at	73	2.425	0.0168	No
2	CTNND1	1422450_at 1437448_s_at 1445830_at	291	1.690	0.0208	No
3	EML4	1429612_at 1447838_x_at	316	1.655	0.0335	No
4	NR2F2	1416158_at 1416159_at 1416160_at 1431237_at 1444229_at	578	1.356	0.0328	No
5	FOXP1	1421140_a_at 1421141_a_at 1421142_s_at 1435222_at 1438802_at 1443258_at 1446280_at 1447209_at 1455242_at 1456851_at	1251	1.019	0.0103	No
6	CASQ1	1422598_at	1268	1.016	0.0180	No
7	PRM1	1415955_x_at 1437054_x_at 1439379_x_at	1339	1.001	0.0231	No
8	TNMD	1417979_at	1647	0.937	0.0168	No
9	VCL	1416156_at 1416157_at 1445256_at	1706	0.924	0.0218	No
10	PPP1R12A	1429487_at 1437734_at 1437735_at 1444762_at 1444834_at 1453163_at	1909	0.877	0.0198	No
11	CORO1C	1417752_at 1419911_at 1437721_at 1442972_at 1449660_s_at 1459169_at	1968	0.864	0.0243	No
12	CALD1	1424768_at 1424769_s_at 1424770_at 1433146_at 1433147_at 1458057_at	2233	0.801	0.0188	No
13	DUSP10	1417163_at 1417164_at	2241	0.799	0.0252	No
14	RARB	1454906_at	2355	0.772	0.0264	No
15	SCOC	1416267_at 1430999_a_at	2546	0.731	0.0237	No
16	CDC25B	1421963_a_at	2581	0.724	0.0282	No
17	RHOJ	1418892_at 1444982_at	2586	0.723	0.0340	No
18	MAP2K6	1426850_a_at 1459292_at	2630	0.715	0.0379	No
19	EMILIN2	1435264_at	2679	0.704	0.0416	No
20	LRRFIP1	1433842_at 1437477_at 1448487_at	3829	0.519	-0.0069	No
21	TRDN	1426134_at 1426142_a_at 1426143_at 1426144_x_at 1451801_at 1451940_x_at	3892	0.510	-0.0055	No
22	DVL3	1420457_at	4143	0.479	-0.0130	No
23	TGFB1I1	1418136_at	4236	0.468	-0.0134	No
24	JMJD1A	1426810_at	4371	0.455	-0.0158	No
25	RIMS1	1435667_at 1438305_at 1444393_at	4420	0.449	-0.0142	No
26	ABCA1	1421839_at 1421840_at 1450392_at	4772	0.413	-0.0269	No
27	PDLIM7	1417959_at 1428319_at 1443785_x_at	4843	0.405	-0.0268	No
28	PPP2R3A	1455198_a_at	4903	0.400	-0.0262	No
29	TANK	1421640_a_at 1441513_at 1459668_at	5024	0.388	-0.0285	No
30	PICALM	1441328_at 1443218_at 1446968_at 1451316_a_at 1455773_at	5120	0.379	-0.0297	No
31	TPM2	1419738_a_at 1419739_at 1425028_a_at 1449577_x_at	5160	0.375	-0.0284	No
32	HOXC4	1422870_at	5361	0.356	-0.0346	No
33	PODN	1435180_at	5457	0.347	-0.0361	No
34	ITGB1BP2	1423238_at	5641	0.332	-0.0418	No
35	CSRP1	1425810_a_at 1425811_a_at	5649	0.331	-0.0393	No
36	CKM	1417614_at	5769	0.321	-0.0421	No
37	PPAP2B	1429514_at 1446850_at 1448908_at	5797	0.318	-0.0407	No
38	GGN	1445278_at	6058	0.295	-0.0502	No
39	CA3	1430584_s_at 1449434_at 1453588_at 1460256_at	6685	0.247	-0.0769	No
40	TADA3L	1417467_a_at 1448719_at	6696	0.247	-0.0754	No
41	TRIM3	1451663_a_at	6733	0.244	-0.0750	No
42	ITGB6	1422983_at 1432281_a_at	6930	0.228	-0.0821	No
43	SRF	1418255_s_at 1418256_at	6937	0.228	-0.0805	No
44	FLNC	1424063_at 1447812_x_at 1449073_at	6938	0.227	-0.0786	No
45	SDPR	1416778_at 1416779_at 1443832_s_at	6971	0.225	-0.0782	No
46	HOXB5	1418415_at	7108	0.215	-0.0827	No
47	SRD5A2	1422960_at	7114	0.215	-0.0811	No
48	TIMP3	1419088_at 1419089_at 1449334_at 1449335_at	7259	0.204	-0.0860	No
49	CALN1	1425846_a_at	7432	0.193	-0.0923	No
50	FGF17	1421523_at 1456239_at	7632	0.179	-0.1000	No
51	CHD2	1444246_at 1445843_at	7648	0.178	-0.0992	No
52	PRKAB2	1435874_at 1435875_at 1442001_at	7698	0.174	-0.1000	No
53	EFHD1	1448507_at	7770	0.170	-0.1019	No
54	NRAS	1422688_a_at 1454060_a_at	7939	0.159	-0.1083	No
55	ARF6	1418822_a_at 1418823_at 1418824_at	8050	0.150	-0.1121	No
56	CXCL5	1419728_at	8070	0.149	-0.1117	No
57	COL1A1	1423669_at 1455494_at	8118	0.145	-0.1127	No
58	MYL9	1452670_at	8147	0.143	-0.1128	No
59	PPARG	1420715_a_at	8208	0.139	-0.1144	No
60	MYLK	1425504_at 1425505_at 1425506_at	8406	0.126	-0.1224	No
61	MRPS21	1422451_at	8710	0.107	-0.1354	No
62	CFL2	1418066_at 1418067_at 1431432_at	8810	0.101	-0.1391	No
63	DSTN	1417124_at	9007	0.089	-0.1474	No
64	NR2F1	1418157_at 1422412_x_at	9033	0.087	-0.1478	No
65	FGF7	1422243_at 1438405_at	9040	0.087	-0.1474	No
66	CDKN1B	1419497_at 1434045_at	9462	0.061	-0.1662	No
67	CSDA	1435800_a_at 1451012_a_at	9619	0.050	-0.1730	No
68	STARD13	1452604_at	9707	0.045	-0.1766	No
69	NFATC4	1423380_s_at 1432821_at 1454369_a_at	9710	0.045	-0.1763	No
70	NPR3	1435184_at 1448024_at 1450286_at	9789	0.040	-0.1796	No
71	TAGLN	1423505_at	10169	0.015	-0.1969	No
72	MYH11	1418122_at 1448962_at	10445	-0.002	-0.2095	No
73	ASB2	1428444_at 1436259_at	10470	-0.004	-0.2106	No
74	PLN	1423359_at 1450952_at 1460332_at	10580	-0.010	-0.2155	No
75	MRGPRF	1425894_at	10677	-0.016	-0.2198	No
76	ADAMTSL1	1430313_at	10701	-0.018	-0.2207	No
77	IGF2AS	1427394_at	10720	-0.018	-0.2214	No
78	MUS81	1431885_a_at 1450432_s_at	10736	-0.019	-0.2219	No
79	CRH	1457984_at	10788	-0.023	-0.2241	No
80	TRIM46	1460568_at	10824	-0.026	-0.2254	No
81	KCNK3	1425341_at 1425342_a_at 1426058_a_at	11167	-0.048	-0.2408	No
82	MITF	1422025_at 1455214_at	11218	-0.052	-0.2426	No
83	BNC2	1438861_at 1440593_at 1459132_at	11271	-0.055	-0.2446	No
84	ASXL2	1439063_at 1444754_at 1453295_at 1458366_at 1460597_at	11412	-0.063	-0.2505	No
85	DGKG	1419756_at 1431167_at 1449584_at	11415	-0.063	-0.2501	No
86	TAF5L	1448195_at	11574	-0.072	-0.2567	No
87	ACTR3	1426392_a_at 1434968_a_at 1452051_at	11725	-0.083	-0.2629	No
88	PLCB3	1448661_at	12247	-0.113	-0.2859	No
89	CACNA1B	1425812_a_at 1436602_x_at 1439612_at 1460608_at	12619	-0.137	-0.3018	No
90	ASPA	1418472_at	12647	-0.138	-0.3019	No
91	SLC16A6	1417884_at	12665	-0.139	-0.3016	No
92	MLLT7	1422149_at	12721	-0.143	-0.3029	No
93	TAZ	1416207_at 1453785_at	12737	-0.145	-0.3024	No
94	MID1	1422055_at 1438239_at 1441929_at 1443666_at	12832	-0.151	-0.3055	No
95	OTX1	1437601_at	12888	-0.155	-0.3067	No
96	FGFRL1	1447878_s_at 1451912_a_at	12979	-0.160	-0.3095	No
97	NKX2-2	1421112_at	13380	-0.186	-0.3264	No
98	FOXP2	1422014_at 1438231_at 1438232_at 1440108_at 1441365_at 1458191_at	13585	-0.200	-0.3341	No
99	H2AFX	1416746_at	13647	-0.204	-0.3352	No
100	NPAS2	1421036_at 1421037_at	13829	-0.217	-0.3417	No
101	BLOC1S1	1422614_s_at	13959	-0.225	-0.3458	No
102	PFN1	1449018_at	13989	-0.227	-0.3452	No
103	RAI2	1452358_at	14048	-0.231	-0.3460	No
104	FOSB	1422134_at	14066	-0.232	-0.3448	No
105	CNN1	1417917_at	14273	-0.247	-0.3522	No
106	FOXE3	1422393_at	14544	-0.266	-0.3624	No
107	RBBP7	1415775_at 1456227_x_at	14920	-0.294	-0.3772	No
108	HOXD10	1418606_at	15240	-0.318	-0.3892	No
109	MYL7	1449071_at	15574	-0.342	-0.4017	No
110	KCNH2	1449544_a_at	15613	-0.344	-0.4006	No
111	ELAVL4	1428741_at 1450258_a_at 1452894_at 1457399_at	15670	-0.350	-0.4003	No
112	ACTB	1419734_at 1436722_a_at 1440365_at AFFX-b-ActinMur/M12481_3_at AFFX-b-ActinMur/M12481_5_at AFFX-b-ActinMur/M12481_M_at	15686	-0.351	-0.3980	No
113	KRTCAP2	1417058_a_at 1417059_at	16068	-0.382	-0.4124	No
114	MAP1A	1460566_at	16104	-0.386	-0.4108	No
115	MAPKAPK2	1426648_at	16184	-0.392	-0.4112	No
116	PHF12	1434922_at 1453579_at	16518	-0.422	-0.4230	Yes
117	IL17B	1431693_a_at	16523	-0.423	-0.4196	Yes
118	ABR	1433477_at	16610	-0.430	-0.4200	Yes
119	UBE2H	1418631_at 1418632_at 1428791_at 1438971_x_at 1447374_at 1459930_at	16727	-0.440	-0.4217	Yes
120	LRRTM4	1437214_at 1455937_at	16826	-0.451	-0.4225	Yes
121	WNT3	1450763_x_at	16837	-0.452	-0.4192	Yes
122	DLL1	1419204_at	16966	-0.465	-0.4212	Yes
123	CHST8	1428977_at	16979	-0.466	-0.4179	Yes
124	ARPC4	1423588_at 1423589_at	16995	-0.468	-0.4147	Yes
125	PELI2	1419006_s_at 1436966_at 1437181_at	17054	-0.474	-0.4134	Yes
126	MYO1E	1420159_at 1420160_s_at 1428509_at 1449753_at 1449941_at	17324	-0.502	-0.4216	Yes
127	SERTAD4	1454877_at	17367	-0.508	-0.4193	Yes
128	SLC25A4	1424562_a_at 1424563_at 1434897_a_at 1455069_x_at	17373	-0.508	-0.4153	Yes
129	NPPA	1456062_at	17376	-0.509	-0.4112	Yes
130	GRK6	1437436_s_at 1450480_a_at 1451672_at	17448	-0.516	-0.4102	Yes
131	NRXN3	1419825_at 1431153_at 1432931_at 1433788_at 1438193_at 1439629_at 1442423_at 1444700_at 1456137_at 1460101_at	17615	-0.534	-0.4134	Yes
132	SLC4A3	1418485_at 1453687_at	17682	-0.543	-0.4119	Yes
133	MYL6	1435041_at	17753	-0.551	-0.4105	Yes
134	HOXB4	1451761_at 1460379_at	17824	-0.559	-0.4091	Yes
135	HOXC5	1439885_at 1450832_at 1456301_at	17858	-0.564	-0.4059	Yes
136	ACTG2	1422340_a_at	17989	-0.581	-0.4071	Yes
137	CFL1	1448346_at 1455138_x_at	18162	-0.606	-0.4100	Yes
138	EEF1B2	1448252_a_at	18361	-0.631	-0.4138	Yes
139	SLC2A4	1415958_at 1415959_at	18487	-0.650	-0.4142	Yes
140	RSU1	1419259_at	18613	-0.669	-0.4143	Yes
141	THRAP1	1436904_at 1438725_at 1444068_at 1446840_at 1453160_at 1453161_at	18741	-0.691	-0.4145	Yes
142	ITGB8	1436223_at	18799	-0.698	-0.4113	Yes
143	DUSP5	1437199_at	18806	-0.699	-0.4057	Yes
144	H3F3A	1423263_at 1442087_at	18844	-0.705	-0.4016	Yes
145	ATF3	1449363_at	18862	-0.707	-0.3965	Yes
146	ATF4	1438992_x_at 1439258_at 1448135_at	19011	-0.731	-0.3972	Yes
147	FGF8	1451882_a_at	19222	-0.771	-0.4005	Yes
148	MBNL1	1416904_at 1439686_at 1440315_at 1445106_at 1457924_at	19632	-0.847	-0.4122	Yes
149	LCP1	1415983_at 1448160_at	19895	-0.906	-0.4168	Yes
150	GPR20	1440021_at	19906	-0.909	-0.4097	Yes
151	EGR3	1421486_at 1436329_at	19914	-0.912	-0.4024	Yes
152	LDB1	1452024_a_at	20183	-0.976	-0.4066	Yes
153	RUNDC1	1454829_at	20295	-1.003	-0.4034	Yes
154	ACTA1	1427735_a_at	20375	-1.018	-0.3986	Yes
155	TLE3	1419654_at 1419655_at 1449554_at 1458512_at	20515	-1.053	-0.3962	Yes
156	ACTN1	1427385_s_at 1428585_at 1452415_at	20612	-1.081	-0.3916	Yes
157	ERBB2IP	1428011_a_at 1439079_a_at 1439080_at 1439638_at 1440573_at	20654	-1.094	-0.3844	Yes
158	UNC84B	1433832_at 1439238_at	20719	-1.121	-0.3781	Yes
159	KCNA1	1417416_at 1437230_at 1442413_at 1455785_at	20914	-1.213	-0.3769	Yes
160	STAT5B	1422102_a_at 1422103_a_at	20958	-1.236	-0.3686	Yes
161	DIXDC1	1425256_a_at 1435207_at 1443957_at 1444395_at	21126	-1.322	-0.3653	Yes
162	GADD45G	1453851_a_at	21192	-1.365	-0.3570	Yes
163	MAPK14	1416703_at 1416704_at 1426104_at 1442364_at 1451927_a_at 1459617_at	21320	-1.472	-0.3506	Yes
164	SGK	1416041_at	21376	-1.525	-0.3404	Yes
165	PCDH7	1427592_at 1437442_at 1449249_at 1456214_at	21406	-1.564	-0.3288	Yes
166	COL23A1	1429209_at 1429210_at 1440911_at	21427	-1.586	-0.3165	Yes
167	MYADM	1423321_at 1439389_s_at	21468	-1.623	-0.3049	Yes
168	SVIL	1427662_at 1460694_s_at 1460735_at	21485	-1.643	-0.2920	Yes
169	TPM3	1427260_a_at 1427567_a_at 1436958_x_at 1449996_a_at 1449997_at	21616	-1.853	-0.2826	Yes
170	RERE	1454670_at	21641	-1.906	-0.2678	Yes
171	VASP	1451097_at	21643	-1.914	-0.2520	Yes
172	FLNA	1426677_at	21670	-1.984	-0.2367	Yes
173	JUNB	1415899_at	21672	-1.992	-0.2202	Yes
174	ANXA6	1415818_at 1429246_a_at 1429247_at 1442288_at	21677	-2.002	-0.2038	Yes
175	RASSF2	1428392_at 1444889_at	21715	-2.124	-0.1878	Yes
176	LPP	1425673_at 1436714_at 1437235_x_at 1438271_at 1440167_s_at 1454899_at 1455314_at	21796	-2.538	-0.1704	Yes
177	CNN2	1450981_at	21853	-3.054	-0.1476	Yes
178	IER2	1416442_at	21874	-3.262	-0.1214	Yes
179	FOS	1423100_at	21901	-3.644	-0.0924	Yes
180	EGR1	1417065_at	21922	-4.993	-0.0518	Yes
181	EGR2	1427682_a_at 1427683_at	21930	-6.298	0.0002	Yes