Details for gene set V$SRF

Table: GSEA Results Summary

Dataset	Set_02_BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_BT_ATM_minus_versus_ATM_plus.cls#BT_ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$SRF_Q4
Enrichment Score (ES)	-0.43785334
Normalized Enrichment Score (NES)	-1.8141991
Nominal p-value	0.0
FDR q-value	0.023527164
FWER p-Value	0.071

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	AGRP	1421690_s_at 1457362_at	57	2.476	0.0164	No
2	CITED2	1417129_a_at 1421267_a_at 1439915_at 1440091_at 1443561_at 1443926_at 1445638_at 1446176_at 1447861_x_at 1457632_s_at 1459301_at	73	2.425	0.0344	No
3	ROCK2	1423592_at 1451041_at	175	1.980	0.0450	No
4	EML4	1429612_at 1447838_x_at	316	1.655	0.0513	No
5	NR2F2	1416158_at 1416159_at 1416160_at 1431237_at 1444229_at	578	1.356	0.0497	No
6	FOXP1	1421140_a_at 1421141_a_at 1421142_s_at 1435222_at 1438802_at 1443258_at 1446280_at 1447209_at 1455242_at 1456851_at	1251	1.019	0.0267	No
7	PRM1	1415955_x_at 1437054_x_at 1439379_x_at	1339	1.001	0.0304	No
8	RASD2	1427343_at 1427344_s_at 1458433_at	1358	0.999	0.0373	No
9	ARHGEF17	1419938_s_at 1419939_at 1433682_at 1442357_at 1447441_at	1488	0.972	0.0388	No
10	TNMD	1417979_at	1647	0.937	0.0388	No
11	VCL	1416156_at 1416157_at 1445256_at	1706	0.924	0.0432	No
12	PPP1R12A	1429487_at 1437734_at 1437735_at 1444762_at 1444834_at 1453163_at	1909	0.877	0.0407	No
13	STAG2	1421849_at 1450396_at	1991	0.857	0.0435	No
14	CALD1	1424768_at 1424769_s_at 1424770_at 1433146_at 1433147_at 1458057_at	2233	0.801	0.0386	No
15	RARB	1454906_at	2355	0.772	0.0390	No
16	POU3F4	1422164_at 1422165_at	2436	0.757	0.0412	No
17	CX3CL1	1415803_at 1415804_at 1421610_at 1441884_x_at	2454	0.753	0.0462	No
18	SCOC	1416267_at 1430999_a_at	2546	0.731	0.0476	No
19	RHOJ	1418892_at 1444982_at	2586	0.723	0.0514	No
20	MAP2K6	1426850_a_at 1459292_at	2630	0.715	0.0549	No
21	EMILIN2	1435264_at	2679	0.704	0.0581	No
22	ATRX	1420945_at 1420946_at 1420947_at 1438750_at 1441014_at 1441771_at 1450051_at 1453734_at 1456832_at	3151	0.619	0.0412	No
23	VGF	1436094_at	3199	0.611	0.0438	No
24	MMP14	1416572_at 1448383_at	3213	0.608	0.0479	No
25	SLC35A2	1422827_x_at 1432533_a_at 1436664_a_at 1439433_a_at 1453858_at 1457024_x_at	3364	0.584	0.0455	No
26	DVL3	1420457_at	4143	0.479	0.0134	No
27	TBL1X	1434643_at 1434644_at 1441435_at 1446736_at 1455042_at	4158	0.478	0.0164	No
28	TGFB1I1	1418136_at	4236	0.468	0.0165	No
29	CTGF	1416953_at	4313	0.461	0.0166	No
30	JMJD1A	1426810_at	4371	0.455	0.0174	No
31	HOXA3	1427433_s_at 1441070_at 1452421_at	4404	0.451	0.0194	No
32	RIMS1	1435667_at 1438305_at 1444393_at	4420	0.449	0.0222	No
33	PPP2R3A	1455198_a_at	4903	0.400	0.0031	No
34	TANK	1421640_a_at 1441513_at 1459668_at	5024	0.388	0.0006	No
35	TPM2	1419738_a_at 1419739_at 1425028_a_at 1449577_x_at	5160	0.375	-0.0027	No
36	ASPH	1420959_at 1425274_at 1425275_at 1426015_s_at 1436455_at 1450058_at	5256	0.366	-0.0043	No
37	PODN	1435180_at	5457	0.347	-0.0108	No
38	ITGB1BP2	1423238_at	5641	0.332	-0.0166	No
39	CSRP1	1425810_a_at 1425811_a_at	5649	0.331	-0.0144	No
40	CKM	1417614_at	5769	0.321	-0.0174	No
41	PPAP2B	1429514_at 1446850_at 1448908_at	5797	0.318	-0.0162	No
42	MYL1	1452651_a_at	5811	0.316	-0.0144	No
43	SH3BGR	1422644_at	5812	0.316	-0.0119	No
44	HERC1	1425378_at 1434060_at 1440437_at 1440903_at	6184	0.285	-0.0268	No
45	TADA3L	1417467_a_at 1448719_at	6696	0.247	-0.0484	No
46	SRF	1418255_s_at 1418256_at	6937	0.228	-0.0577	No
47	SDPR	1416778_at 1416779_at 1443832_s_at	6971	0.225	-0.0575	No
48	HOXB5	1418415_at	7108	0.215	-0.0620	No
49	SRD5A2	1422960_at	7114	0.215	-0.0606	No
50	CALN1	1425846_a_at	7432	0.193	-0.0737	No
51	FGF17	1421523_at 1456239_at	7632	0.179	-0.0815	No
52	CHD2	1444246_at 1445843_at	7648	0.178	-0.0808	No
53	EFHD1	1448507_at	7770	0.170	-0.0851	No
54	MYL9	1452670_at	8147	0.143	-0.1012	No
55	PPARG	1420715_a_at	8208	0.139	-0.1029	No
56	MYLK	1425504_at 1425505_at 1425506_at	8406	0.126	-0.1110	No
57	CFL2	1418066_at 1418067_at 1431432_at	8810	0.101	-0.1287	No
58	DSTN	1417124_at	9007	0.089	-0.1371	No
59	NR2F1	1418157_at 1422412_x_at	9033	0.087	-0.1375	No
60	CDKN1B	1419497_at 1434045_at	9462	0.061	-0.1567	No
61	CSDA	1435800_a_at 1451012_a_at	9619	0.050	-0.1635	No
62	TMOD1	1419863_at 1422754_at	9761	0.042	-0.1697	No
63	NPR3	1435184_at 1448024_at 1450286_at	9789	0.040	-0.1706	No
64	SERPINH1	1450843_a_at 1456733_x_at	10147	0.016	-0.1869	No
65	EGR4	1449977_at	10167	0.015	-0.1877	No
66	TAGLN	1423505_at	10169	0.015	-0.1876	No
67	GAB2	1419829_a_at 1420785_at 1439786_at 1446860_at	10443	-0.002	-0.2001	No
68	MYH11	1418122_at 1448962_at	10445	-0.002	-0.2002	No
69	ELF4	1421337_at 1445778_at	10624	-0.013	-0.2082	No
70	MRGPRF	1425894_at	10677	-0.016	-0.2105	No
71	KCNMB1	1421400_at 1421401_at	10696	-0.017	-0.2112	No
72	ADAMTSL1	1430313_at	10701	-0.018	-0.2113	No
73	IGF2AS	1427394_at	10720	-0.018	-0.2119	No
74	MUS81	1431885_a_at 1450432_s_at	10736	-0.019	-0.2125	No
75	CRH	1457984_at	10788	-0.023	-0.2146	No
76	TRIM46	1460568_at	10824	-0.026	-0.2161	No
77	TNNC1	1418370_at	10996	-0.038	-0.2236	No
78	KCNK3	1425341_at 1425342_a_at 1426058_a_at	11167	-0.048	-0.2311	No
79	AKAP12	1419706_a_at 1458235_at	11231	-0.053	-0.2336	No
80	BNC2	1438861_at 1440593_at 1459132_at	11271	-0.055	-0.2349	No
81	DGKG	1419756_at 1431167_at 1449584_at	11415	-0.063	-0.2410	No
82	TAF5L	1448195_at	11574	-0.072	-0.2477	No
83	SRP54	1430476_at 1441233_at 1441480_at	12154	-0.108	-0.2735	No
84	PLCB3	1448661_at	12247	-0.113	-0.2769	No
85	CACNA1B	1425812_a_at 1436602_x_at 1439612_at 1460608_at	12619	-0.137	-0.2929	No
86	ASPA	1418472_at	12647	-0.138	-0.2930	No
87	TAZ	1416207_at 1453785_at	12737	-0.145	-0.2960	No
88	MID1	1422055_at 1438239_at 1441929_at 1443666_at	12832	-0.151	-0.2992	No
89	NLGN3	1456384_at	12897	-0.155	-0.3009	No
90	EDN1	1451924_a_at	12943	-0.158	-0.3018	No
91	FGFRL1	1447878_s_at 1451912_a_at	12979	-0.160	-0.3021	No
92	NKX2-2	1421112_at	13380	-0.186	-0.3191	No
93	FOXP2	1422014_at 1438231_at 1438232_at 1440108_at 1441365_at 1458191_at	13585	-0.200	-0.3269	No
94	H2AFX	1416746_at	13647	-0.204	-0.3282	No
95	MSX1	1417127_at 1448601_s_at	13678	-0.207	-0.3280	No
96	NPAS2	1421036_at 1421037_at	13829	-0.217	-0.3332	No
97	BLOC1S1	1422614_s_at	13959	-0.225	-0.3374	No
98	PFN1	1449018_at	13989	-0.227	-0.3370	No
99	FOSB	1422134_at	14066	-0.232	-0.3387	No
100	CNN1	1417917_at	14273	-0.247	-0.3462	No
101	FOXE3	1422393_at	14544	-0.266	-0.3566	No
102	SORT1	1423362_at 1423363_at 1450955_s_at	14719	-0.280	-0.3624	No
103	RBBP7	1415775_at 1456227_x_at	14920	-0.294	-0.3694	No
104	HOXD10	1418606_at	15240	-0.318	-0.3816	No
105	ESRRA	1442864_at 1460652_at	15372	-0.326	-0.3851	No
106	MYL7	1449071_at	15574	-0.342	-0.3917	No
107	ELAVL4	1428741_at 1450258_a_at 1452894_at 1457399_at	15670	-0.350	-0.3934	No
108	ACTB	1419734_at 1436722_a_at 1440365_at AFFX-b-ActinMur/M12481_3_at AFFX-b-ActinMur/M12481_5_at AFFX-b-ActinMur/M12481_M_at	15686	-0.351	-0.3914	No
109	KRTCAP2	1417058_a_at 1417059_at	16068	-0.382	-0.4059	No
110	MAP1A	1460566_at	16104	-0.386	-0.4046	No
111	MAPKAPK2	1426648_at	16184	-0.392	-0.4052	No
112	PHF12	1434922_at 1453579_at	16518	-0.422	-0.4172	No
113	IL17B	1431693_a_at	16523	-0.423	-0.4142	No
114	ABR	1433477_at	16610	-0.430	-0.4148	No
115	LRRTM4	1437214_at 1455937_at	16826	-0.451	-0.4212	No
116	DLL1	1419204_at	16966	-0.465	-0.4240	No
117	ARPC4	1423588_at 1423589_at	16995	-0.468	-0.4217	No
118	INSM1	1421399_at 1455865_at	17027	-0.471	-0.4195	No
119	JPH2	1421453_at 1455404_at	17244	-0.494	-0.4257	No
120	IHPK1	1422968_at 1422969_s_at 1438845_at 1438846_x_at 1452694_at	17269	-0.496	-0.4229	No
121	TGIF	1422286_a_at	17305	-0.499	-0.4207	No
122	MYO1E	1420159_at 1420160_s_at 1428509_at 1449753_at 1449941_at	17324	-0.502	-0.4177	No
123	SERTAD4	1454877_at	17367	-0.508	-0.4157	No
124	SLC25A4	1424562_a_at 1424563_at 1434897_a_at 1455069_x_at	17373	-0.508	-0.4120	No
125	NPPA	1456062_at	17376	-0.509	-0.4082	No
126	GRK6	1437436_s_at 1450480_a_at 1451672_at	17448	-0.516	-0.4075	No
127	SLC4A3	1418485_at 1453687_at	17682	-0.543	-0.4140	No
128	MYL6	1435041_at	17753	-0.551	-0.4130	No
129	HOXB4	1451761_at 1460379_at	17824	-0.559	-0.4119	No
130	HOXC5	1439885_at 1450832_at 1456301_at	17858	-0.564	-0.4091	No
131	ACTG2	1422340_a_at	17989	-0.581	-0.4106	No
132	CFL1	1448346_at 1455138_x_at	18162	-0.606	-0.4138	No
133	EEF1B2	1448252_a_at	18361	-0.631	-0.4181	No
134	RSU1	1419259_at	18613	-0.669	-0.4245	No
135	THRAP1	1436904_at 1438725_at 1444068_at 1446840_at 1453160_at 1453161_at	18741	-0.691	-0.4250	No
136	DUSP5	1437199_at	18806	-0.699	-0.4225	No
137	MCL1	1416880_at 1416881_at 1437527_x_at 1448503_at 1456243_x_at 1456381_x_at	19140	-0.753	-0.4321	Yes
138	HOXA5	1443803_x_at 1448926_at	19187	-0.762	-0.4283	Yes
139	FGF8	1451882_a_at	19222	-0.771	-0.4239	Yes
140	TPM1	1423049_a_at 1423721_at 1447713_at 1456623_at	19366	-0.796	-0.4244	Yes
141	DDX17	1437773_x_at 1439037_at 1452155_a_at	19502	-0.822	-0.4243	Yes
142	RAB30	1426452_a_at	19627	-0.847	-0.4235	Yes
143	MBNL1	1416904_at 1439686_at 1440315_at 1445106_at 1457924_at	19632	-0.847	-0.4171	Yes
144	GPR20	1440021_at	19906	-0.909	-0.4227	Yes
145	EGR3	1421486_at 1436329_at	19914	-0.912	-0.4160	Yes
146	RUNDC1	1454829_at	20295	-1.003	-0.4257	Yes
147	ACTA1	1427735_a_at	20375	-1.018	-0.4215	Yes
148	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	20490	-1.047	-0.4187	Yes
149	TLE3	1419654_at 1419655_at 1449554_at 1458512_at	20515	-1.053	-0.4117	Yes
150	ACTN1	1427385_s_at 1428585_at 1452415_at	20612	-1.081	-0.4078	Yes
151	ERBB2IP	1428011_a_at 1439079_a_at 1439080_at 1439638_at 1440573_at	20654	-1.094	-0.4013	Yes
152	FST	1421365_at 1434458_at	20913	-1.213	-0.4038	Yes
153	KCNA1	1417416_at 1437230_at 1442413_at 1455785_at	20914	-1.213	-0.3944	Yes
154	STAT5B	1422102_a_at 1422103_a_at	20958	-1.236	-0.3869	Yes
155	MYO1B	1427450_x_at 1441210_at 1447364_x_at 1448989_a_at 1448990_a_at 1458007_at 1459679_s_at	21013	-1.260	-0.3797	Yes
156	DIXDC1	1425256_a_at 1435207_at 1443957_at 1444395_at	21126	-1.322	-0.3747	Yes
157	GADD45G	1453851_a_at	21192	-1.365	-0.3672	Yes
158	MAPK14	1416703_at 1416704_at 1426104_at 1442364_at 1451927_a_at 1459617_at	21320	-1.472	-0.3617	Yes
159	NCOA6	1423374_at	21331	-1.486	-0.3507	Yes
160	SGK	1416041_at	21376	-1.525	-0.3410	Yes
161	COL23A1	1429209_at 1429210_at 1440911_at	21427	-1.586	-0.3311	Yes
162	SVIL	1427662_at 1460694_s_at 1460735_at	21485	-1.643	-0.3210	Yes
163	TPM3	1427260_a_at 1427567_a_at 1436958_x_at 1449996_a_at 1449997_at	21616	-1.853	-0.3128	Yes
164	RERE	1454670_at	21641	-1.906	-0.2992	Yes
165	VASP	1451097_at	21643	-1.914	-0.2845	Yes
166	FLNA	1426677_at	21670	-1.984	-0.2704	Yes
167	JUNB	1415899_at	21672	-1.992	-0.2552	Yes
168	ANXA6	1415818_at 1429246_a_at 1429247_at 1442288_at	21677	-2.002	-0.2399	Yes
169	DUSP2	1450698_at	21696	-2.054	-0.2250	Yes
170	RASSF2	1428392_at 1444889_at	21715	-2.124	-0.2094	Yes
171	LPP	1425673_at 1436714_at 1437235_x_at 1438271_at 1440167_s_at 1454899_at 1455314_at	21796	-2.538	-0.1936	Yes
172	IER2	1416442_at	21874	-3.262	-0.1720	Yes
173	FOS	1423100_at	21901	-3.644	-0.1452	Yes
174	DUSP6	1415834_at	21907	-3.749	-0.1165	Yes
175	NR4A1	1416505_at	21917	-3.996	-0.0862	Yes
176	EGR1	1417065_at	21922	-4.993	-0.0480	Yes
177	EGR2	1427682_a_at 1427683_at	21930	-6.298	0.0002	Yes