Details for gene set V$PEA3

Table: GSEA Results Summary

Dataset	Set_02_BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_BT_ATM_minus_versus_ATM_plus.cls#BT_ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$PEA3_Q6
Enrichment Score (ES)	-0.3930309
Normalized Enrichment Score (NES)	-1.6409221
Nominal p-value	0.0030165913
FDR q-value	0.04602315
FWER p-Value	0.502

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	LCK	1425396_a_at 1439145_at 1439146_s_at 1457917_at	50	2.528	0.0192	No
2	PTPRC	1422124_a_at 1440165_at	268	1.734	0.0240	No
3	RTN3	1418101_a_at 1425539_a_at 1442365_at 1443220_at	418	1.561	0.0305	No
4	SPATA6	1418650_at 1418651_at 1438023_at 1445355_at	439	1.540	0.0427	No
5	CACNA1E	1421692_at	490	1.466	0.0529	No
6	ETV3	1418635_at 1418636_at 1445997_at 1456358_at	527	1.416	0.0633	No
7	GTF2H1	1453169_a_at	581	1.355	0.0724	No
8	FUCA1	1416109_at 1437772_s_at 1453805_at 1456155_x_at	1166	1.040	0.0544	No
9	CBL	1434829_at 1446608_at 1450457_at 1455886_at	1207	1.030	0.0613	No
10	TIAL1	1421148_a_at 1426352_s_at 1446713_at 1452821_at 1455675_a_at 1455676_x_at	1229	1.025	0.0691	No
11	EXTL2	1422538_at 1422539_at	1322	1.006	0.0734	No
12	DPP3	1431594_at 1448215_a_at	1408	0.988	0.0779	No
13	NT5C2	1417201_at 1425933_a_at 1442629_at 1443391_at 1448614_at	1495	0.970	0.0822	No
14	NRP1	1418084_at 1448943_at 1448944_at 1457198_at	1577	0.953	0.0866	No
15	ITPR2	1421678_at 1424833_at 1424834_s_at 1427287_s_at 1427693_at 1444418_at 1444551_at 1447328_at	1656	0.935	0.0910	No
16	SLC43A1	1440007_at 1453255_at	1670	0.932	0.0983	No
17	IL2RA	1420691_at 1420692_at	2200	0.808	0.0809	No
18	EPHA2	1421151_a_at	2207	0.807	0.0875	No
19	SYTL1	1450240_a_at	2291	0.789	0.0904	No
20	RNASEL	1426603_at 1426604_at 1446458_at	2293	0.788	0.0971	No
21	ARHGAP20	1427522_at 1429918_at	2917	0.662	0.0741	No
22	CYR61	1416039_x_at 1417848_at 1417849_at 1438133_a_at 1442340_x_at 1457823_at 1459462_at	3095	0.628	0.0713	No
23	MMP7	1449478_at	3110	0.625	0.0760	No
24	MR1	1421898_a_at 1421899_a_at	3288	0.597	0.0729	No
25	MFN2	1441424_at 1448131_at 1451900_at	3469	0.566	0.0695	No
26	TMEM24	1428095_a_at 1457585_at	4249	0.467	0.0377	No
27	SV2A	1423406_at	4642	0.426	0.0233	No
28	FUT11	1431066_at 1434123_at 1437748_at	4689	0.422	0.0248	No
29	TAF5	1435474_at	4842	0.405	0.0212	No
30	PUM1	1423117_at 1456054_a_at 1460325_at	4896	0.401	0.0222	No
31	CPNE8	1430520_at 1430521_s_at 1431146_a_at	5012	0.389	0.0202	No
32	PICALM	1441328_at 1443218_at 1446968_at 1451316_a_at 1455773_at	5120	0.379	0.0185	No
33	DMBT1	1418287_a_at	5121	0.378	0.0218	No
34	LZTS2	1426409_at	5213	0.370	0.0207	No
35	RIN1	1424507_at 1437460_x_at	5287	0.364	0.0205	No
36	CAMK1D	1426389_at 1438643_at 1452050_at	5506	0.344	0.0134	No
37	MARK1	1419834_x_at 1425509_at 1425510_at 1425511_at 1449630_s_at	5659	0.331	0.0092	No
38	ANK3	1425202_a_at 1439220_at 1447259_at 1451628_a_at 1457288_at	5718	0.325	0.0093	No
39	PGM2L1	1438774_s_at 1452841_at 1456478_at	5829	0.314	0.0069	No
40	SLC2A3	1421924_at 1427770_a_at 1437052_s_at 1455898_x_at	6205	0.284	-0.0079	No
41	DCLRE1C	1457679_at 1458361_at	6206	0.284	-0.0055	No
42	ADRBK1	1426249_at 1451992_at	6514	0.259	-0.0174	No
43	FEN1	1421731_a_at 1436454_x_at	6596	0.253	-0.0189	No
44	CIAS1	1425412_at	6753	0.242	-0.0240	No
45	PAX6	1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at	6943	0.227	-0.0308	No
46	CREBL2	1435085_at 1442738_at	7076	0.217	-0.0350	No
47	KAZALD1	1436528_at	7263	0.204	-0.0418	No
48	SEC24C	1430250_at 1452147_at	7403	0.195	-0.0465	No
49	CTBP2	1422887_a_at 1439823_at	7536	0.186	-0.0510	No
50	CUGBP1	1423932_at 1425932_a_at 1426407_at 1426408_at 1427413_a_at	7584	0.182	-0.0516	No
51	DDX23	1430050_at	7679	0.175	-0.0545	No
52	HHEX	1423319_at	7839	0.165	-0.0604	No
53	KCNAB2	1416956_at 1425885_a_at	7977	0.156	-0.0653	No
54	KCNQ1	1441588_at 1442029_at 1446255_at 1447418_at 1449464_at 1457781_at 1459443_at	8055	0.150	-0.0676	No
55	MICAL2	1438726_at 1455685_at	8203	0.139	-0.0732	No
56	GPA33	1419330_a_at 1454247_a_at	8392	0.127	-0.0807	No
57	MMRN2	1437123_at	8634	0.112	-0.0908	No
58	TXNIP	1415996_at 1415997_at	8856	0.099	-0.1002	No
59	SF1	1422321_a_at 1423750_a_at 1423751_at 1459765_s_at 1459766_x_at	8860	0.099	-0.0995	No
60	ABLIM1	1442376_at 1453103_at 1454708_at 1460120_at	8924	0.094	-0.1015	No
61	NUMA1	1423974_at 1423975_s_at 1441090_at 1444576_at 1444577_x_at	8949	0.092	-0.1019	No
62	ELK4	1422233_at 1427162_a_at 1447571_at 1450549_s_at	9203	0.077	-0.1128	No
63	PRKACB	1420610_at 1420611_at 1457197_at	9684	0.046	-0.1345	No
64	VPS11	1428109_at 1428110_x_at 1441922_x_at 1452489_at	9758	0.042	-0.1375	No
65	BCL2L14	1424814_a_at 1429347_at	9773	0.041	-0.1378	No
66	FCGR3A	1425225_at 1448620_at	9892	0.033	-0.1429	No
67	POLR2L	1428296_at	10002	0.026	-0.1477	No
68	TCIRG1	1420635_a_at	10120	0.017	-0.1530	No
69	UNC93B1	1423768_at	10299	0.007	-0.1611	No
70	GAB2	1419829_a_at 1420785_at 1439786_at 1446860_at	10443	-0.002	-0.1676	No
71	PDZRN4	1456512_at	10560	-0.009	-0.1729	No
72	TNNI2	1416889_at 1438608_at 1438609_x_at	11005	-0.039	-0.1930	No
73	ZNF289	1439460_a_at 1448672_a_at	11089	-0.044	-0.1964	No
74	IPO7	1442511_at 1454955_at 1458165_at	11255	-0.054	-0.2035	No
75	VCAM1	1415989_at 1436003_at 1448162_at 1451314_a_at	11490	-0.068	-0.2137	No
76	SLAMF9	1419315_at	11564	-0.072	-0.2164	No
77	EHF	1419474_a_at 1419475_a_at 1447760_x_at 1451375_at	11583	-0.073	-0.2167	No
78	LIN28	1437752_at	11747	-0.084	-0.2234	No
79	PRDX6	1423223_a_at 1442878_at	12238	-0.113	-0.2450	No
80	PLCB3	1448661_at	12247	-0.113	-0.2444	No
81	CD3E	1422105_at 1445748_at	12436	-0.126	-0.2520	No
82	IRAK4	1421670_a_at 1451749_at	12627	-0.137	-0.2595	No
83	CD53	1439589_at 1448617_at 1459744_at	12718	-0.143	-0.2624	No
84	NCF2	1448561_at	12797	-0.149	-0.2647	No
85	HPS5	1434677_at	13277	-0.179	-0.2852	No
86	GFI1	1417679_at	13343	-0.183	-0.2867	No
87	NDUFS2	1451096_at	13769	-0.212	-0.3044	No
88	IL18	1417932_at	13852	-0.218	-0.3063	No
89	AKT3	1422078_at 1435260_at 1435879_at 1443222_at 1460307_at	14140	-0.237	-0.3175	No
90	CDKN2C	1416868_at 1439164_at	14343	-0.251	-0.3246	No
91	PIK4CB	1439197_at	14562	-0.268	-0.3323	No
92	LAG3	1449911_at	14857	-0.289	-0.3434	No
93	LRMP	1448409_at	14916	-0.294	-0.3436	No
94	XPNPEP1	1422443_at	15006	-0.301	-0.3451	No
95	IL18BP	1450424_a_at	15051	-0.304	-0.3445	No
96	TYSND1	1428689_at 1428690_at 1441856_x_at	15076	-0.305	-0.3430	No
97	DGKZ	1426738_at 1452169_a_at	15090	-0.306	-0.3410	No
98	SRRM1	1420934_a_at 1420935_a_at 1442330_at 1447447_s_at 1450045_at 1454689_at 1459828_at	15180	-0.313	-0.3424	No
99	GPD1	1416204_at 1439396_x_at 1448249_at 1456732_at	15221	-0.316	-0.3416	No
100	CDC14A	1436913_at 1443184_at 1446493_at 1459517_at	15302	-0.322	-0.3425	No
101	PAFAH2	1448489_at	15339	-0.324	-0.3414	No
102	ESRRA	1442864_at 1460652_at	15372	-0.326	-0.3401	No
103	RAB39	1437762_at	15375	-0.327	-0.3374	No
104	ELAVL4	1428741_at 1450258_a_at 1452894_at 1457399_at	15670	-0.350	-0.3480	No
105	CENTD2	1428064_at	15714	-0.353	-0.3469	No
106	LAMC1	1423885_at 1423886_at	15810	-0.360	-0.3482	No
107	RPS3	1435151_a_at 1447563_at 1455600_at	15973	-0.375	-0.3525	No
108	MAPKAPK2	1426648_at	16184	-0.392	-0.3588	No
109	IVL	1422222_at 1439878_at	16287	-0.401	-0.3601	No
110	ACSL5	1428082_at	16421	-0.413	-0.3627	No
111	INPPL1	1460394_a_at	16440	-0.415	-0.3599	No
112	ANKRD1	1420991_at 1420992_at	16447	-0.416	-0.3567	No
113	EPC1	1418850_at 1429914_at 1440198_at 1440742_at 1442279_at 1443675_at 1458315_at	16516	-0.422	-0.3562	No
114	LTBR	1416435_at	16592	-0.429	-0.3560	No
115	GPR120	1439489_at	16707	-0.438	-0.3575	No
116	ADAMTS4	1452595_at	16792	-0.447	-0.3576	No
117	SSBP3	1425940_a_at 1427917_s_at 1439136_at 1443554_at 1457560_at 1458749_at	16941	-0.462	-0.3604	No
118	LALBA	1418363_at	17000	-0.469	-0.3591	No
119	BLNK	1451780_at	17243	-0.494	-0.3660	No
120	PSD	1435780_at	17312	-0.500	-0.3649	No
121	ZRANB1	1415712_at 1427200_at 1436228_at	17351	-0.505	-0.3623	No
122	LRFN4	1454700_at	17374	-0.508	-0.3590	No
123	RAB1B	1424064_at	17953	-0.577	-0.3807	No
124	TRIM8	1418577_at 1427593_at 1438679_at 1460237_at	18027	-0.587	-0.3790	No
125	NCAM1	1421966_at 1425126_at 1426864_a_at 1426865_a_at 1439556_at 1440067_at 1441995_at 1442680_at 1443018_at 1450437_a_at 1450438_at 1454140_at	18333	-0.627	-0.3877	Yes
126	PBXIP1	1451132_at	18372	-0.633	-0.3840	Yes
127	IGSF4	1417376_a_at 1417377_at 1417378_at 1431611_a_at	18481	-0.649	-0.3835	Yes
128	VDAC2	1415990_at	18484	-0.649	-0.3780	Yes
129	FGF23	1422176_at	18502	-0.653	-0.3733	Yes
130	SELP	1420558_at 1440173_x_at 1449906_at	18569	-0.663	-0.3706	Yes
131	DUSP5	1437199_at	18806	-0.699	-0.3755	Yes
132	RPS6KA4	1438243_at 1448498_at	18866	-0.709	-0.3722	Yes
133	MAP4K2	1428297_at 1434833_at 1450244_a_at	18979	-0.727	-0.3712	Yes
134	C1ORF24	1422567_at 1454942_at	19008	-0.731	-0.3662	Yes
135	SNCG	1417788_at	19043	-0.736	-0.3615	Yes
136	RHOG	1422572_at	19100	-0.748	-0.3577	Yes
137	WASF2	1438683_at	19278	-0.780	-0.3592	Yes
138	XCL1	1419412_at	19454	-0.812	-0.3604	Yes
139	RAB30	1426452_a_at	19627	-0.847	-0.3610	Yes
140	GATA3	1448886_at	19704	-0.862	-0.3572	Yes
141	SELL	1419480_at 1419481_at	19707	-0.863	-0.3499	Yes
142	CMAS	1426662_at	19992	-0.931	-0.3551	Yes
143	ARHGDIB	1426454_at	20048	-0.945	-0.3495	Yes
144	ARF3	1421789_s_at 1423973_a_at 1434787_at 1437331_a_at 1456007_at	20058	-0.947	-0.3419	Yes
145	ZDHHC5	1426310_at 1426311_s_at	20080	-0.953	-0.3347	Yes
146	GRIN2B	1422223_at 1431700_at	20100	-0.957	-0.3275	Yes
147	SORL1	1426258_at 1445889_at 1453003_at 1460390_at	20235	-0.993	-0.3252	Yes
148	SLC35C1	1452139_at	20252	-0.996	-0.3174	Yes
149	SPI1	1418747_at	20349	-1.014	-0.3132	Yes
150	CAPZA1	1439455_x_at 1440380_at	20599	-1.076	-0.3155	Yes
151	POLD4	1427885_at	20622	-1.085	-0.3073	Yes
152	CD69	1428735_at	20877	-1.192	-0.3088	Yes
153	CD84	1422875_at 1446505_at	20925	-1.218	-0.3006	Yes
154	SLC41A1	1444511_at 1460565_at	21029	-1.269	-0.2945	Yes
155	CAP1	1417461_at 1417462_at	21047	-1.281	-0.2844	Yes
156	FLI1	1422024_at 1433512_at 1441584_at	21162	-1.346	-0.2781	Yes
157	ST7L	1427916_at 1456363_at	21166	-1.348	-0.2668	Yes
158	RUNX3	1421467_at 1440275_at	21228	-1.400	-0.2577	Yes
159	TCEB3	1422591_at 1434117_at 1450676_at	21292	-1.453	-0.2482	Yes
160	NRGN	1423231_at	21361	-1.514	-0.2384	Yes
161	BDNF	1422168_a_at 1422169_a_at	21424	-1.580	-0.2278	Yes
162	ITPKB	1435272_at 1441058_at	21433	-1.591	-0.2146	Yes
163	SLC30A7	1450697_at	21497	-1.661	-0.2034	Yes
164	SIPA1	1416206_at	21548	-1.717	-0.1911	Yes
165	PRF1	1451862_a_at	21549	-1.718	-0.1764	Yes
166	CTSS	1448591_at	21552	-1.721	-0.1619	Yes
167	PDGFD	1426319_at 1446691_at 1456532_at	21568	-1.752	-0.1477	Yes
168	MARK2	1415952_at 1415953_s_at 1435889_at 1444303_at	21570	-1.753	-0.1328	Yes
169	HIPK1	1421298_a_at 1424540_at 1457515_at	21619	-1.856	-0.1192	Yes
170	PTPN6	1456694_x_at 1460188_at	21667	-1.973	-0.1045	Yes
171	LPXN	1424965_at	21753	-2.273	-0.0891	Yes
172	CTSW	1422632_at	21807	-2.631	-0.0691	Yes
173	POU2AF1	1416957_at	21814	-2.687	-0.0465	Yes
174	ELOVL1	1425676_a_at 1443820_x_at 1455994_x_at 1456530_x_at	21823	-2.778	-0.0232	Yes
175	CD5	1418353_at	21877	-3.319	0.0026	Yes