Details for gene set V$NFKB_Q6

Table: GSEA Results Summary

Dataset	Set_02_BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_BT_ATM_minus_versus_ATM_plus.cls#BT_ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$NFKB_Q6_01
Enrichment Score (ES)	-0.41452765
Normalized Enrichment Score (NES)	-1.7125828
Nominal p-value	0.0
FDR q-value	0.035859995
FWER p-Value	0.258

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PPP1R13B	1434895_s_at 1442956_at 1459224_at	0	10.211	0.0673	No
2	UBE2D3	1423112_at 1423113_a_at 1423114_at 1450858_a_at 1450859_s_at 1455479_a_at 1455480_s_at	77	2.421	0.0798	No
3	REV3L	1424632_a_at 1426194_x_at 1451960_a_at	142	2.121	0.0908	No
4	TP53	1426538_a_at 1427739_a_at 1438808_at 1457623_x_at 1459780_at 1459781_x_at	161	2.024	0.1033	No
5	IER5	1417612_at 1417613_at	171	1.992	0.1160	No
6	SP6	1427786_at 1427787_at 1437788_at 1442342_at	305	1.666	0.1209	No
7	TRIB2	1426640_s_at 1426641_at 1459852_x_at	346	1.628	0.1298	No
8	BMP2K	1421103_at 1437419_at 1458370_at	510	1.432	0.1317	No
9	NR2F2	1416158_at 1416159_at 1416160_at 1431237_at 1444229_at	578	1.356	0.1376	No
10	HSD3B7	1416968_a_at 1442912_at	636	1.313	0.1436	No
11	PTGES	1439747_at 1449449_at 1449450_at	780	1.221	0.1451	No
12	XPO6	1422759_a_at 1440492_at 1443737_at	817	1.190	0.1513	No
13	TOP1	1423474_at 1438495_at 1457573_at 1459672_at	1077	1.067	0.1464	No
14	RBMS1	1418703_at 1434005_at 1441437_at 1458578_at 1459968_at	1215	1.027	0.1469	No
15	NR3C1	1421866_at 1421867_at 1453860_s_at 1457635_s_at 1460303_at	1554	0.958	0.1377	No
16	SEC61A1	1416189_a_at 1416190_a_at 1416191_at 1434986_a_at 1448242_at 1455987_at	1712	0.921	0.1365	No
17	NLK	1419112_at 1435970_at 1443279_at 1445427_at 1456467_s_at	1779	0.906	0.1395	No
18	ZBTB11	1454826_at	1835	0.894	0.1428	No
19	IL2RA	1420691_at 1420692_at	2200	0.808	0.1314	No
20	EP300	1434765_at	2203	0.808	0.1367	No
21	CHD6	1427384_at 1431047_at	2380	0.768	0.1336	No
22	FBXL12	1448420_a_at	2989	0.648	0.1100	No
23	MRPS6	1424440_at 1447585_s_at	3005	0.645	0.1135	No
24	CCL5	1418126_at	3146	0.621	0.1112	No
25	FUT7	1420756_at	3170	0.617	0.1142	No
26	CREB1	1421582_a_at 1421583_at 1423402_at 1428755_at 1452529_a_at 1452901_at	3276	0.598	0.1133	No
27	PTPRJ	1425587_a_at 1425588_at 1427602_at 1427629_at 1443683_at 1455030_at	3464	0.567	0.1085	No
28	IFNB1	1422305_at	3663	0.541	0.1029	No
29	ARHGEF2	1421042_at 1421043_s_at 1427646_a_at	3986	0.501	0.0914	No
30	RAP2C	1428119_a_at 1437016_x_at 1460430_at	4011	0.498	0.0936	No
31	CLCN1	1427591_at 1448082_at	4022	0.496	0.0964	No
32	MOBKL2C	1440919_at 1459919_a_at	4303	0.461	0.0866	No
33	COL27A1	1429549_at 1453191_at	4341	0.458	0.0879	No
34	RBPSUH	1418114_at 1438848_at 1446436_at 1448957_at 1454896_at	4547	0.435	0.0814	No
35	SLC6A12	1449382_at	4588	0.431	0.0824	No
36	UACA	1452985_at	4916	0.399	0.0700	No
37	DDR1	1415797_at 1415798_at 1435820_x_at 1437619_x_at 1438367_x_at 1439382_x_at 1456226_x_at 1459990_at	4975	0.393	0.0699	No
38	HTR3B	1421652_at	4985	0.392	0.0721	No
39	CYLD	1429617_at 1429618_at 1445213_at	5240	0.367	0.0628	No
40	UBE2I	1422712_a_at 1422713_a_at 1425478_x_at 1453189_at	5299	0.362	0.0625	No
41	NFKBIB	1421266_s_at 1446718_at	5525	0.343	0.0545	No
42	ASH1L	1420985_at 1441117_at 1450071_at 1450072_at	6116	0.291	0.0293	No
43	IL7	1422080_at 1436861_at	6130	0.290	0.0306	No
44	ZIC4	1421539_at 1456417_at	6424	0.268	0.0189	No
45	CSF3	1419427_at	7077	0.217	-0.0096	No
46	FGF1	1423136_at 1441042_at 1450869_at	7311	0.201	-0.0190	No
47	FGF17	1421523_at 1456239_at	7632	0.179	-0.0325	No
48	SOCS2	1418507_s_at 1438470_at 1441476_at 1442586_at 1446085_at 1449109_at	7777	0.170	-0.0380	No
49	IL23A	1419529_at	8411	0.126	-0.0663	No
50	TSLP	1450004_at	8669	0.109	-0.0774	No
51	ARHGAP8	1451463_at	8688	0.108	-0.0775	No
52	SMPD3	1422779_at 1438665_at 1445759_at 1450748_at	8689	0.108	-0.0768	No
53	NFAT5	1426029_a_at 1438999_a_at 1439328_at 1439805_at 1448966_a_at 1451921_a_at 1458213_at	8761	0.104	-0.0794	No
54	CNTNAP1	1421580_at	9002	0.090	-0.0898	No
55	EIF5A	1437859_x_at 1451470_s_at	9451	0.061	-0.1100	No
56	TRIM47	1426784_at	10616	-0.013	-0.1634	No
57	EDG5	1428176_at 1447880_x_at	10692	-0.017	-0.1667	No
58	AP1S2	1437998_at 1447903_x_at 1452657_at 1456252_x_at 1460036_at	10713	-0.018	-0.1675	No
59	RND1	1455197_at	10855	-0.029	-0.1738	No
60	MITF	1422025_at 1455214_at	11218	-0.052	-0.1901	No
61	VCAM1	1415989_at 1436003_at 1448162_at 1451314_a_at	11490	-0.068	-0.2021	No
62	EGF	1418093_a_at	11572	-0.072	-0.2053	No
63	EHF	1419474_a_at 1419475_a_at 1447760_x_at 1451375_at	11583	-0.073	-0.2053	No
64	NEK8	1450337_a_at 1458157_at	11600	-0.074	-0.2056	No
65	RIN2	1426368_at 1441209_at 1442829_at	11734	-0.083	-0.2111	No
66	KRTAP13-1	1428007_at	12006	-0.099	-0.2229	No
67	PAPPA	1427633_a_at 1432591_at 1432592_at 1459375_at	12124	-0.106	-0.2276	No
68	ALG6	1439007_at 1459337_at	12743	-0.145	-0.2550	No
69	ERN1	1421240_at 1431886_at 1437119_at 1438583_at 1438997_at 1450176_at	12784	-0.148	-0.2559	No
70	SMOC1	1448321_at	12961	-0.159	-0.2629	No
71	C1QL1	1422777_at	12989	-0.160	-0.2631	No
72	GATA4	1418863_at 1418864_at 1441364_at	13259	-0.178	-0.2743	No
73	MAP3K11	1450669_at	13441	-0.190	-0.2814	No
74	CENTB5	1439021_at	13448	-0.190	-0.2804	No
75	ZNRF1	1420949_at 1420950_at 1424384_a_at	13596	-0.200	-0.2858	No
76	MSX1	1417127_at 1448601_s_at	13678	-0.207	-0.2882	No
77	ILK	1449942_a_at	13688	-0.207	-0.2872	No
78	RASGRP4	1425380_at	13726	-0.210	-0.2876	No
79	POU2F3	1450507_at	13885	-0.221	-0.2934	No
80	PFN1	1449018_at	13989	-0.227	-0.2966	No
81	BCL6B	1418421_at	14615	-0.273	-0.3235	No
82	GRIN2D	1421393_at	14868	-0.290	-0.3332	No
83	SNAP25	1416828_at 1443398_at	15058	-0.304	-0.3399	No
84	ASCL3	1420780_at	15237	-0.318	-0.3459	No
85	MAG	1460219_at	15249	-0.318	-0.3444	No
86	SIRT2	1423507_a_at	15423	-0.330	-0.3501	No
87	ATP1B1	1418453_a_at 1423890_x_at 1439036_a_at 1451152_a_at 1455949_at	15516	-0.338	-0.3521	No
88	PTHLH	1422324_a_at 1427527_a_at	15618	-0.345	-0.3545	No
89	PHOX2B	1422232_at 1455907_x_at	15743	-0.354	-0.3579	No
90	UBD	1419762_at	15981	-0.376	-0.3663	No
91	WNT10A	1460657_at	16031	-0.379	-0.3660	No
92	GREM1	1425357_a_at	16054	-0.381	-0.3645	No
93	GNG4	1417943_at 1417944_at 1447669_s_at	16343	-0.405	-0.3751	No
94	NFKBIA	1420088_at 1420089_at 1438157_s_at 1448306_at 1449731_s_at	16399	-0.411	-0.3749	No
95	NTN1	1422987_at 1454974_at	16593	-0.429	-0.3809	No
96	DUSP22	1441723_at 1448985_at	16601	-0.429	-0.3784	No
97	IL1RN	1423017_a_at 1425663_at 1451798_at	16631	-0.432	-0.3769	No
98	UBE2H	1418631_at 1418632_at 1428791_at 1438971_x_at 1447374_at 1459930_at	16727	-0.440	-0.3784	No
99	NFKB2	1425902_a_at 1429128_x_at	16780	-0.446	-0.3778	No
100	MADCAM1	1425253_a_at	16930	-0.461	-0.3816	No
101	SEMA3B	1416644_a_at 1431795_a_at 1448415_a_at	17016	-0.470	-0.3825	No
102	ANKHD1	1419867_a_at 1436597_at 1440754_at 1441597_at 1442641_at 1448008_at 1453023_at 1455759_a_at	17074	-0.477	-0.3819	No
103	TCF1	1421234_at	17207	-0.489	-0.3848	No
104	TGIF	1422286_a_at	17305	-0.499	-0.3859	No
105	PCSK2	1428305_at 1444147_at 1447991_at 1447992_s_at 1448312_at	17420	-0.514	-0.3878	No
106	MSC	1418417_at	17657	-0.539	-0.3951	No
107	DAP3	1450848_at	17695	-0.544	-0.3932	No
108	BAI2	1435558_at	17814	-0.558	-0.3949	No
109	STAT6	1421708_a_at 1426353_at	17837	-0.561	-0.3922	No
110	MAML2	1446570_at 1447546_s_at	18103	-0.597	-0.4005	No
111	SOX5	1423500_a_at 1432189_a_at 1432190_at 1440827_x_at 1446461_at 1452511_at 1459261_at	18107	-0.598	-0.3967	No
112	BLR1	1422003_at	18236	-0.615	-0.3985	No
113	HIVEP1	1422742_at	18306	-0.624	-0.3976	No
114	TBX20	1422219_a_at 1425158_at 1453351_at	18324	-0.626	-0.3942	No
115	IGSF4	1417376_a_at 1417377_at 1417378_at 1431611_a_at	18481	-0.649	-0.3971	No
116	KLK9	1431681_at	18517	-0.656	-0.3944	No
117	IL13	1420802_at	18588	-0.666	-0.3932	No
118	RALGDS	1460634_at	18637	-0.672	-0.3910	No
119	DGKI	1439986_at 1442813_at	18703	-0.685	-0.3895	No
120	TNIP1	1427689_a_at	18886	-0.713	-0.3932	No
121	MAP4K2	1428297_at 1434833_at 1450244_a_at	18979	-0.727	-0.3926	No
122	UPF2	1435030_at 1445777_at	19004	-0.730	-0.3889	No
123	EDN2	1449161_at	19030	-0.735	-0.3852	No
124	RHOG	1422572_at	19100	-0.748	-0.3834	No
125	SLAMF8	1425294_at	19581	-0.838	-0.4000	No
126	ELMO1	1424523_at 1446610_at 1450208_a_at	19899	-0.907	-0.4085	Yes
127	TCEA2	1418107_at 1440791_x_at	20011	-0.935	-0.4075	Yes
128	SIN3A	1419101_at 1419102_at 1419900_at 1449343_s_at	20044	-0.943	-0.4027	Yes
129	CHD4	1436343_at 1438476_a_at 1451295_a_at	20233	-0.992	-0.4048	Yes
130	BIRC3	1421392_a_at 1425223_at	20286	-1.002	-0.4006	Yes
131	IL12A	1425454_a_at	20338	-1.011	-0.3963	Yes
132	JAK3	1425750_a_at 1446515_at	20414	-1.029	-0.3930	Yes
133	SHOX2	1420559_a_at 1438042_at	20450	-1.036	-0.3878	Yes
134	GRK5	1446361_at 1446998_at 1449514_at	20463	-1.039	-0.3815	Yes
135	TRAF4	1416571_at 1460642_at	20504	-1.050	-0.3764	Yes
136	EBI3	1449222_at	20514	-1.053	-0.3699	Yes
137	AMOTL1	1428785_at 1431121_at 1446909_at 1455247_at	20600	-1.076	-0.3667	Yes
138	ACTN1	1427385_s_at 1428585_at 1452415_at	20612	-1.081	-0.3600	Yes
139	UNC84B	1433832_at 1439238_at	20719	-1.121	-0.3575	Yes
140	RFX5	1423103_at	20763	-1.139	-0.3520	Yes
141	IL6ST	1421239_at 1437303_at 1452843_at 1460295_s_at	20813	-1.163	-0.3466	Yes
142	CD69	1428735_at	20877	-1.192	-0.3416	Yes
143	USP52	1426700_a_at	20929	-1.221	-0.3359	Yes
144	PCBP4	1433658_x_at 1449054_a_at 1449055_x_at	20933	-1.222	-0.3280	Yes
145	DCAMKL1	1423125_at 1424270_at 1424271_at 1436659_at 1446190_at 1450863_a_at 1451289_at 1451917_a_at	21026	-1.267	-0.3239	Yes
146	LTB	1419135_at	21109	-1.313	-0.3190	Yes
147	PRKCD	1422847_a_at 1442256_at	21204	-1.377	-0.3142	Yes
148	NDRG2	1448154_at	21216	-1.390	-0.3056	Yes
149	ZBTB9	1429125_at	21296	-1.457	-0.2996	Yes
150	TNFSF7	1449926_at	21317	-1.469	-0.2909	Yes
151	TNFRSF9	1421481_at 1428034_a_at 1460469_at	21357	-1.512	-0.2827	Yes
152	ICAM1	1424067_at	21412	-1.572	-0.2748	Yes
153	BDNF	1422168_a_at 1422169_a_at	21424	-1.580	-0.2649	Yes
154	GPHN	1426462_at 1426463_at 1430038_at 1444869_at 1445188_at 1458242_at	21518	-1.682	-0.2581	Yes
155	LTA	1420353_at	21540	-1.710	-0.2478	Yes
156	ETV1	1422607_at 1445314_at 1450684_at	21566	-1.747	-0.2374	Yes
157	BMF	1422995_at 1454880_s_at 1458325_x_at	21575	-1.757	-0.2262	Yes
158	GNB1	1417432_a_at 1425908_at 1454696_at 1459442_at	21578	-1.763	-0.2147	Yes
159	BAZ2B	1435240_at 1440984_at 1441556_at 1442704_at 1442971_at 1445048_at 1448007_at 1458077_at	21636	-1.895	-0.2048	Yes
160	BATF	1419410_at	21644	-1.915	-0.1925	Yes
161	RASSF2	1428392_at 1444889_at	21715	-2.124	-0.1817	Yes
162	IL4I1	1419192_at	21719	-2.135	-0.1678	Yes
163	ENO3	1417951_at 1449631_at	21768	-2.327	-0.1547	Yes
164	GADD45B	1420197_at 1449773_s_at 1450971_at	21794	-2.532	-0.1391	Yes
165	TNFRSF1B	1418099_at 1448951_at	21815	-2.705	-0.1222	Yes
166	RELB	1417856_at	21846	-2.947	-0.1042	Yes
167	IL27RA	1449508_at	21882	-3.395	-0.0834	Yes
168	BCL3	1418133_at	21891	-3.545	-0.0604	Yes
169	DUSP6	1415834_at	21907	-3.749	-0.0364	Yes
170	MMP9	1416298_at 1448291_at	21927	-5.707	0.0003	Yes