Details for gene set V$NFKAPPAB

Table: GSEA Results Summary

Dataset	Set_02_BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_BT_ATM_minus_versus_ATM_plus.cls#BT_ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$NFKAPPAB_01
Enrichment Score (ES)	-0.45946607
Normalized Enrichment Score (NES)	-1.9184073
Nominal p-value	0.0
FDR q-value	0.0091076195
FWER p-Value	0.021

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	UBE2D3	1423112_at 1423113_a_at 1423114_at 1450858_a_at 1450859_s_at 1455479_a_at 1455480_s_at	77	2.421	0.0132	No
2	TP53	1426538_a_at 1427739_a_at 1438808_at 1457623_x_at 1459780_at 1459781_x_at	161	2.024	0.0233	No
3	IER5	1417612_at 1417613_at	171	1.992	0.0366	No
4	SP6	1427786_at 1427787_at 1437788_at 1442342_at	305	1.666	0.0420	No
5	TRIB2	1426640_s_at 1426641_at 1459852_x_at	346	1.628	0.0514	No
6	BMP2K	1421103_at 1437419_at 1458370_at	510	1.432	0.0537	No
7	NR2F2	1416158_at 1416159_at 1416160_at 1431237_at 1444229_at	578	1.356	0.0600	No
8	HSD3B7	1416968_a_at 1442912_at	636	1.313	0.0664	No
9	KCNS3	1445519_at 1457799_at	959	1.116	0.0593	No
10	ITGB4	1427387_a_at	983	1.098	0.0658	No
11	P2RY10	1452815_at	1130	1.050	0.0664	No
12	RBMS1	1418703_at 1434005_at 1441437_at 1458578_at 1459968_at	1215	1.027	0.0696	No
13	NLK	1419112_at 1435970_at 1443279_at 1445427_at 1456467_s_at	1779	0.906	0.0500	No
14	ZBTB11	1454826_at	1835	0.894	0.0536	No
15	COL11A2	1423578_at	2028	0.849	0.0506	No
16	IL2RA	1420691_at 1420692_at	2200	0.808	0.0483	No
17	OPCML	1435612_at 1442752_at 1457446_at 1458228_at	2272	0.794	0.0505	No
18	CHD6	1427384_at 1431047_at	2380	0.768	0.0509	No
19	FBXL12	1448420_a_at	2989	0.648	0.0274	No
20	LAMA1	1418153_at	3137	0.622	0.0249	No
21	CCL5	1418126_at	3146	0.621	0.0289	No
22	FUT7	1420756_at	3170	0.617	0.0320	No
23	CREB1	1421582_a_at 1421583_at 1423402_at 1428755_at 1452529_a_at 1452901_at	3276	0.598	0.0313	No
24	IFNB1	1422305_at	3663	0.541	0.0173	No
25	CHX10	1419628_at	3726	0.531	0.0181	No
26	HOXB9	1452317_at	3932	0.507	0.0122	No
27	RAP2C	1428119_a_at 1437016_x_at 1460430_at	4011	0.498	0.0120	No
28	CLCN1	1427591_at 1448082_at	4022	0.496	0.0150	No
29	MOBKL2C	1440919_at 1459919_a_at	4303	0.461	0.0053	No
30	CTGF	1416953_at	4313	0.461	0.0081	No
31	SLC6A12	1449382_at	4588	0.431	-0.0015	No
32	BCKDK	1443813_x_at 1460644_at	4883	0.402	-0.0123	No
33	UACA	1452985_at	4916	0.399	-0.0110	No
34	DDR1	1415797_at 1415798_at 1435820_x_at 1437619_x_at 1438367_x_at 1439382_x_at 1456226_x_at 1459990_at	4975	0.393	-0.0110	No
35	CYLD	1429617_at 1429618_at 1445213_at	5240	0.367	-0.0206	No
36	UBE2I	1422712_a_at 1422713_a_at 1425478_x_at 1453189_at	5299	0.362	-0.0207	No
37	NFKBIB	1421266_s_at 1446718_at	5525	0.343	-0.0287	No
38	ASH1L	1420985_at 1441117_at 1450071_at 1450072_at	6116	0.291	-0.0539	No
39	ZFP36L2	1437626_at 1439054_at 1451034_at	6185	0.285	-0.0550	No
40	PLAU	1422138_at 1422139_at	6197	0.284	-0.0536	No
41	IL1RAPL1	1445821_at 1458964_at	6865	0.233	-0.0826	No
42	ARPC2	1437148_at 1442295_at	7267	0.204	-0.0997	No
43	FGF1	1423136_at 1441042_at 1450869_at	7311	0.201	-0.1002	No
44	PUNC	1423496_a_at 1439498_at 1444981_at	7407	0.195	-0.1033	No
45	AGPAT1	1421024_at 1421025_at	7597	0.182	-0.1107	No
46	FGF17	1421523_at 1456239_at	7632	0.179	-0.1110	No
47	SEC14L2	1424530_at	7797	0.168	-0.1174	No
48	KCNH3	1421619_at 1431690_at 1445805_x_at 1459107_at	7934	0.159	-0.1226	No
49	PPARBP	1421906_at 1421907_at 1439408_a_at 1446250_at 1447450_at 1448708_at 1450402_at 1453972_x_at	7991	0.155	-0.1241	No
50	CXCL5	1419728_at	8070	0.149	-0.1266	No
51	IL23A	1419529_at	8411	0.126	-0.1414	No
52	TSLP	1450004_at	8669	0.109	-0.1525	No
53	ARHGAP8	1451463_at	8688	0.108	-0.1526	No
54	SMPD3	1422779_at 1438665_at 1445759_at 1450748_at	8689	0.108	-0.1518	No
55	NFAT5	1426029_a_at 1438999_a_at 1439328_at 1439805_at 1448966_a_at 1451921_a_at 1458213_at	8761	0.104	-0.1544	No
56	EIF5A	1437859_x_at 1451470_s_at	9451	0.061	-0.1856	No
57	ATOH1	1449822_at	9551	0.055	-0.1898	No
58	SAMSN1	1421457_a_at 1431539_at	9852	0.035	-0.2034	No
59	ACTN3	1418677_at	9856	0.035	-0.2032	No
60	CDK6	1435338_at 1440040_at 1455287_at 1460291_at	10422	-0.001	-0.2292	No
61	TRIM47	1426784_at	10616	-0.013	-0.2380	No
62	SDC4	1417654_at 1448793_a_at	10620	-0.013	-0.2381	No
63	EDG5	1428176_at 1447880_x_at	10692	-0.017	-0.2412	No
64	AP1S2	1437998_at 1447903_x_at 1452657_at 1456252_x_at 1460036_at	10713	-0.018	-0.2420	No
65	RND1	1455197_at	10855	-0.029	-0.2483	No
66	SLC12A2	1417622_at 1417623_at 1443332_at 1448780_at	11246	-0.053	-0.2659	No
67	BNC2	1438861_at 1440593_at 1459132_at	11271	-0.055	-0.2666	No
68	VCAM1	1415989_at 1436003_at 1448162_at 1451314_a_at	11490	-0.068	-0.2761	No
69	EGF	1418093_a_at	11572	-0.072	-0.2794	No
70	WNT10B	1426091_a_at	11578	-0.073	-0.2791	No
71	EHF	1419474_a_at 1419475_a_at 1447760_x_at 1451375_at	11583	-0.073	-0.2788	No
72	IL1A	1421473_at	11680	-0.080	-0.2826	No
73	RIN2	1426368_at 1441209_at 1442829_at	11734	-0.083	-0.2845	No
74	KRTAP13-1	1428007_at	12006	-0.099	-0.2963	No
75	SALL1	1450489_at	12122	-0.105	-0.3008	No
76	NOL4	1430189_at 1441447_at 1456387_at	12208	-0.111	-0.3040	No
77	CPD	1418018_at 1418019_at 1418020_s_at 1434547_at 1442212_at 1447392_s_at 1455009_at	12316	-0.118	-0.3081	No
78	TAL1	1449389_at	12479	-0.129	-0.3147	No
79	MAP3K8	1419208_at	12729	-0.144	-0.3251	No
80	TAZ	1416207_at 1453785_at	12737	-0.145	-0.3244	No
81	ALG6	1439007_at 1459337_at	12743	-0.145	-0.3237	No
82	ERN1	1421240_at 1431886_at 1437119_at 1438583_at 1438997_at 1450176_at	12784	-0.148	-0.3245	No
83	ZBTB5	1437484_at	12812	-0.150	-0.3247	No
84	BFSP1	1450571_a_at	12871	-0.154	-0.3263	No
85	SMOC1	1448321_at	12961	-0.159	-0.3293	No
86	COL16A1	1427986_a_at	12972	-0.159	-0.3287	No
87	C1QL1	1422777_at	12989	-0.160	-0.3283	No
88	GATA4	1418863_at 1418864_at 1441364_at	13259	-0.178	-0.3394	No
89	CXCL2	1449984_at	13371	-0.186	-0.3432	No
90	MSX1	1417127_at 1448601_s_at	13678	-0.207	-0.3559	No
91	CXCL11	1419697_at 1419698_at	13915	-0.223	-0.3652	No
92	PFN1	1449018_at	13989	-0.227	-0.3670	No
93	PRX	1423292_a_at	14389	-0.255	-0.3836	No
94	BCL6B	1418421_at	14615	-0.273	-0.3921	No
95	HOXA11	1420414_at	14645	-0.274	-0.3915	No
96	GRIN2D	1421393_at	14868	-0.290	-0.3997	No
97	ASCL3	1420780_at	15237	-0.318	-0.4144	No
98	MAG	1460219_at	15249	-0.318	-0.4128	No
99	CDC14A	1436913_at 1443184_at 1446493_at 1459517_at	15302	-0.322	-0.4129	No
100	ATP1B1	1418453_a_at 1423890_x_at 1439036_a_at 1451152_a_at 1455949_at	15516	-0.338	-0.4204	No
101	AGC1	1449827_at	15636	-0.346	-0.4235	No
102	JARID2	1422698_s_at 1446082_at 1450710_at 1456661_at	15855	-0.365	-0.4310	No
103	UBD	1419762_at	15981	-0.376	-0.4341	No
104	WNT10A	1460657_at	16031	-0.379	-0.4338	No
105	GREM1	1425357_a_at	16054	-0.381	-0.4322	No
106	LIG1	1416641_at	16208	-0.394	-0.4365	No
107	ARHGAP5	1423194_at 1450896_at 1450897_at 1457410_at	16227	-0.396	-0.4346	No
108	SESN2	1425139_at 1451599_at	16245	-0.398	-0.4326	No
109	GNG4	1417943_at 1417944_at 1447669_s_at	16343	-0.405	-0.4343	No
110	FLRT1	1443143_at	16580	-0.427	-0.4422	No
111	TLX1	1450526_at	16585	-0.428	-0.4394	No
112	NTN1	1422987_at 1454974_at	16593	-0.429	-0.4368	No
113	IL1RN	1423017_a_at 1425663_at 1451798_at	16631	-0.432	-0.4355	No
114	ETV6	1423401_at 1434880_at 1444598_at 1457944_at	16696	-0.437	-0.4354	No
115	UBE2H	1418631_at 1418632_at 1428791_at 1438971_x_at 1447374_at 1459930_at	16727	-0.440	-0.4338	No
116	NFKB2	1425902_a_at 1429128_x_at	16780	-0.446	-0.4331	No
117	MADCAM1	1425253_a_at	16930	-0.461	-0.4368	No
118	ABHD8	1416863_at	17214	-0.490	-0.4464	No
119	PCSK2	1428305_at 1444147_at 1447991_at 1447992_s_at 1448312_at	17420	-0.514	-0.4523	No
120	STC2	1419503_at 1445186_at 1449484_at	17572	-0.529	-0.4556	No
121	MSC	1418417_at	17657	-0.539	-0.4557	Yes
122	DAP3	1450848_at	17695	-0.544	-0.4537	Yes
123	BAI2	1435558_at	17814	-0.558	-0.4553	Yes
124	MSN	1421814_at 1450379_at	17833	-0.561	-0.4522	Yes
125	STAT6	1421708_a_at 1426353_at	17837	-0.561	-0.4485	Yes
126	FKHL18	1437820_at	17859	-0.565	-0.4456	Yes
127	MAML2	1446570_at 1447546_s_at	18103	-0.597	-0.4526	Yes
128	SOX5	1423500_a_at 1432189_a_at 1432190_at 1440827_x_at 1446461_at 1452511_at 1459261_at	18107	-0.598	-0.4486	Yes
129	CXCL9	1418652_at 1456907_at	18124	-0.601	-0.4452	Yes
130	BLR1	1422003_at	18236	-0.615	-0.4461	Yes
131	HIVEP1	1422742_at	18306	-0.624	-0.4450	Yes
132	KLK9	1431681_at	18517	-0.656	-0.4501	Yes
133	RRAS	1418448_at	18562	-0.662	-0.4476	Yes
134	IL13	1420802_at	18588	-0.666	-0.4441	Yes
135	CXCL10	1418930_at	18611	-0.669	-0.4405	Yes
136	RALGDS	1460634_at	18637	-0.672	-0.4370	Yes
137	RPS6KA4	1438243_at 1448498_at	18866	-0.709	-0.4426	Yes
138	TNIP1	1427689_a_at	18886	-0.713	-0.4386	Yes
139	MAP4K2	1428297_at 1434833_at 1450244_a_at	18979	-0.727	-0.4378	Yes
140	C1ORF24	1422567_at 1454942_at	19008	-0.731	-0.4341	Yes
141	EDN2	1449161_at	19030	-0.735	-0.4300	Yes
142	TNF	1419607_at	19120	-0.750	-0.4289	Yes
143	LRCH1	1438032_at 1442502_at 1442757_at 1445396_at 1447746_at 1459150_at	19194	-0.765	-0.4270	Yes
144	FOXJ2	1420373_at 1420374_at	19263	-0.778	-0.4247	Yes
145	SLAMF8	1425294_at	19581	-0.838	-0.4335	Yes
146	TCEA2	1418107_at 1440791_x_at	20011	-0.935	-0.4468	Yes
147	SIN3A	1419101_at 1419102_at 1419900_at 1449343_s_at	20044	-0.943	-0.4418	Yes
148	SLC11A2	1417584_at 1426441_at 1441709_at 1447333_at 1452078_a_at	20159	-0.971	-0.4403	Yes
149	KCNN3	1421632_at 1459308_at	20187	-0.977	-0.4348	Yes
150	CHD4	1436343_at 1438476_a_at 1451295_a_at	20233	-0.992	-0.4301	Yes
151	UBE4B	1432499_a_at 1444465_at 1448410_at	20236	-0.993	-0.4233	Yes
152	SOX10	1424985_a_at 1425369_a_at 1451689_a_at	20265	-1.000	-0.4177	Yes
153	BIRC3	1421392_a_at 1425223_at	20286	-1.002	-0.4117	Yes
154	JAK3	1425750_a_at 1446515_at	20414	-1.029	-0.4105	Yes
155	SHOX2	1420559_a_at 1438042_at	20450	-1.036	-0.4049	Yes
156	GRK5	1446361_at 1446998_at 1449514_at	20463	-1.039	-0.3983	Yes
157	TRAF4	1416571_at 1460642_at	20504	-1.050	-0.3929	Yes
158	EBI3	1449222_at	20514	-1.053	-0.3861	Yes
159	ACTN1	1427385_s_at 1428585_at 1452415_at	20612	-1.081	-0.3831	Yes
160	UNC84B	1433832_at 1439238_at	20719	-1.121	-0.3802	Yes
161	USP52	1426700_a_at	20929	-1.221	-0.3814	Yes
162	PCBP4	1433658_x_at 1449054_a_at 1449055_x_at	20933	-1.222	-0.3731	Yes
163	DCAMKL1	1423125_at 1424270_at 1424271_at 1436659_at 1446190_at 1450863_a_at 1451289_at 1451917_a_at	21026	-1.267	-0.3686	Yes
164	LTB	1419135_at	21109	-1.313	-0.3633	Yes
165	ZBTB9	1429125_at	21296	-1.457	-0.3619	Yes
166	TNFSF7	1449926_at	21317	-1.469	-0.3526	Yes
167	TNFRSF9	1421481_at 1428034_a_at 1460469_at	21357	-1.512	-0.3440	Yes
168	GNAO1	1421152_a_at 1448031_at 1460383_at	21374	-1.524	-0.3342	Yes
169	HCST	1419119_at	21400	-1.559	-0.3246	Yes
170	ICAM1	1424067_at	21412	-1.572	-0.3143	Yes
171	BDNF	1422168_a_at 1422169_a_at	21424	-1.580	-0.3039	Yes
172	RIMS2	1422809_at 1432102_at 1436470_at 1443215_at 1450761_s_at	21462	-1.616	-0.2945	Yes
173	GPHN	1426462_at 1426463_at 1430038_at 1444869_at 1445188_at 1458242_at	21518	-1.682	-0.2854	Yes
174	LTA	1420353_at	21540	-1.710	-0.2746	Yes
175	BMF	1422995_at 1454880_s_at 1458325_x_at	21575	-1.757	-0.2640	Yes
176	GNB1	1417432_a_at 1425908_at 1454696_at 1459442_at	21578	-1.763	-0.2520	Yes
177	CXCL16	1418718_at 1449195_s_at	21676	-2.000	-0.2426	Yes
178	IRF1	1448436_a_at	21686	-2.021	-0.2291	Yes
179	IL4I1	1419192_at	21719	-2.135	-0.2159	Yes
180	ENO3	1417951_at 1449631_at	21768	-2.327	-0.2020	Yes
181	ZMYND15	1438498_at	21780	-2.389	-0.1861	Yes
182	GADD45B	1420197_at 1449773_s_at 1450971_at	21794	-2.532	-0.1692	Yes
183	TNFRSF1B	1418099_at 1448951_at	21815	-2.705	-0.1515	Yes
184	RELB	1417856_at	21846	-2.947	-0.1325	Yes
185	CD83	1416111_at	21863	-3.155	-0.1115	Yes
186	IL27RA	1449508_at	21882	-3.395	-0.0889	Yes
187	BCL3	1418133_at	21891	-3.545	-0.0649	Yes
188	HCFC1	1421972_s_at 1433736_at 1445688_at 1446868_at 1450439_at 1457875_at	21915	-3.972	-0.0385	Yes
189	MMP9	1416298_at 1448291_at	21927	-5.707	0.0003	Yes