Details for gene set V$LFA1

Table: GSEA Results Summary

Dataset	Set_02_BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_BT_ATM_minus_versus_ATM_plus.cls#BT_ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$LFA1_Q6
Enrichment Score (ES)	-0.39718103
Normalized Enrichment Score (NES)	-1.6640375
Nominal p-value	0.0015128592
FDR q-value	0.039609414
FWER p-Value	0.41

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SMAD3	1450471_at 1450472_s_at 1454960_at	208	1.878	0.0085	No
2	NR5A2	1420410_at 1449706_s_at 1449707_at	315	1.655	0.0196	No
3	ASXL1	1434561_at 1435077_at 1458380_at	504	1.443	0.0248	No
4	HES1	1418102_at	594	1.348	0.0337	No
5	TPCN1	1434930_at 1451771_at 1451772_at	672	1.287	0.0426	No
6	POU4F1	1429667_at 1429668_at	843	1.172	0.0460	No
7	RAB31	1416165_at 1431691_a_at	1031	1.080	0.0478	No
8	CLTC	1419407_at 1439094_at 1440457_at 1454626_at	1139	1.047	0.0530	No
9	ACVR1C	1428032_at 1443225_at	1334	1.002	0.0537	No
10	HNRPR	1427129_a_at 1438807_at 1452030_a_at	2997	0.647	-0.0165	No
11	BCL11B	1440137_at 1441762_at 1450339_a_at	3305	0.595	-0.0249	No
12	GPR3	1460275_at	3344	0.588	-0.0210	No
13	ADM	1416077_at 1447839_x_at	3456	0.569	-0.0206	No
14	CHX10	1419628_at	3726	0.531	-0.0278	No
15	GRIN2A	1421616_at	3884	0.512	-0.0301	No
16	NEURL	1422251_at 1451872_a_at 1453527_a_at 1456854_at 1458561_at 1460343_at	4040	0.495	-0.0325	No
17	NPTXR	1421181_at 1434270_at 1450147_at	4135	0.480	-0.0322	No
18	BAX	1416837_at	4273	0.465	-0.0340	No
19	PALM	1422034_a_at 1423967_at 1439927_at 1457217_at	4305	0.461	-0.0310	No
20	CTGF	1416953_at	4313	0.461	-0.0269	No
21	CEBPB	1418901_at 1427844_a_at	4394	0.452	-0.0262	No
22	RBPSUH	1418114_at 1438848_at 1446436_at 1448957_at 1454896_at	4547	0.435	-0.0290	No
23	ZNF385	1418865_at	4830	0.407	-0.0381	No
24	PDLIM7	1417959_at 1428319_at 1443785_x_at	4843	0.405	-0.0347	No
25	UBL3	1423461_a_at	5068	0.384	-0.0413	No
26	PNOC	1425892_a_at	5071	0.384	-0.0377	No
27	CCNL1	1423622_a_at 1437383_at	5181	0.373	-0.0391	No
28	SLC13A5	1459729_at	5207	0.371	-0.0367	No
29	LZTS2	1426409_at	5213	0.370	-0.0334	No
30	EPHB2	1425015_at 1425016_at 1442471_at 1445417_at 1454022_at	5355	0.357	-0.0364	No
31	FLT1	1419300_at 1440926_at 1451756_at 1454037_a_at	5503	0.344	-0.0399	No
32	KCNQ4	1435721_at 1442909_at	5523	0.343	-0.0374	No
33	M6PR	1416385_a_at 1416386_a_at	5767	0.321	-0.0455	No
34	NYX	1446344_at	5895	0.308	-0.0484	No
35	GAD1	1416561_at 1416562_at	6026	0.298	-0.0515	No
36	SP7	1418425_at	6247	0.280	-0.0589	No
37	NEUROG1	1438551_at 1450836_at	6427	0.267	-0.0646	No
38	NPAS3	1421567_at 1429138_at 1438060_at 1450287_at	6462	0.264	-0.0636	No
39	RAB5C	1424684_at	6605	0.252	-0.0677	No
40	PPP1R16A	1452724_at 1459751_s_at	6819	0.237	-0.0752	No
41	TBR1	1416711_at	6927	0.228	-0.0779	No
42	SIX4	1425767_a_at 1427701_a_at 1439753_x_at 1456862_at	7205	0.208	-0.0887	No
43	PDYN	1416266_at	7214	0.207	-0.0871	No
44	GSS	1441931_x_at 1448273_at	7320	0.201	-0.0900	No
45	TNRC4	1452851_at	7499	0.189	-0.0963	No
46	CAV1	1449145_a_at	7723	0.172	-0.1049	No
47	OLFML2A	1441635_at 1455743_at	7830	0.166	-0.1082	No
48	ACCN1	1417994_a_at	7850	0.164	-0.1075	No
49	KIF1C	1424747_at 1426325_at	8111	0.146	-0.1180	No
50	S100A5	1449927_at	8127	0.145	-0.1173	No
51	HOXC6	1427361_at 1427362_x_at 1427454_at	8275	0.134	-0.1228	No
52	PLA2G10	1451502_at	8343	0.130	-0.1246	No
53	UQCRC1	1428782_a_at	8734	0.105	-0.1415	No
54	HBLD1	1424154_a_at	8760	0.104	-0.1417	No
55	NFAT5	1426029_a_at 1438999_a_at 1439328_at 1439805_at 1448966_a_at 1451921_a_at 1458213_at	8761	0.104	-0.1407	No
56	FES	1427368_x_at 1452410_a_at	8787	0.102	-0.1409	No
57	PRRX1	1425526_a_at 1425527_at 1425528_at 1432129_a_at 1439774_at 1458004_at	8921	0.094	-0.1461	No
58	SMARCD2	1426192_at 1448400_a_at 1448401_at	8952	0.092	-0.1466	No
59	EFNA3	1431170_at 1455344_at	9160	0.080	-0.1553	No
60	PAX7	1444596_at 1452510_at	9275	0.072	-0.1599	No
61	KCNAB1	1448468_a_at 1454043_a_at	9305	0.070	-0.1605	No
62	CNKSR2	1444513_at 1445194_at	9566	0.054	-0.1720	No
63	IL1F10	1451957_at	9635	0.049	-0.1746	No
64	MOV10	1416380_at 1447376_at	9762	0.042	-0.1800	No
65	PAK1IP1	1423766_at 1430875_a_at	9886	0.033	-0.1853	No
66	RASL12	1428067_at	10181	0.014	-0.1987	No
67	FXYD3	1418374_at	10293	0.007	-0.2038	No
68	GSK3B	1434439_at 1437001_at 1439931_at 1439949_at 1451020_at 1454958_at	10461	-0.003	-0.2114	No
69	CLIC5	1431261_at 1439505_at 1456873_at 1458381_at	10487	-0.005	-0.2125	No
70	NACA	1416669_s_at	10555	-0.009	-0.2155	No
71	ARID1A	1447104_at	10559	-0.009	-0.2156	No
72	ELF4	1421337_at 1445778_at	10624	-0.013	-0.2184	No
73	PTRF	1421431_at 1424130_a_at 1453891_at	10871	-0.030	-0.2294	No
74	ROM1	1448996_at	11050	-0.042	-0.2372	No
75	BNC2	1438861_at 1440593_at 1459132_at	11271	-0.055	-0.2468	No
76	STOML2	1448774_at	11585	-0.073	-0.2605	No
77	MAZ	1427099_at	11658	-0.078	-0.2630	No
78	BACE1	1421824_at 1421825_at 1436956_at 1450384_at 1455826_a_at	11692	-0.080	-0.2638	No
79	IFRD2	1451016_at	11729	-0.083	-0.2646	No
80	LIN28	1437752_at	11747	-0.084	-0.2646	No
81	TUBA3	1438611_at	11794	-0.086	-0.2659	No
82	BCL6	1421818_at 1450381_a_at	11919	-0.094	-0.2707	No
83	SALL1	1450489_at	12122	-0.105	-0.2789	No
84	CASQ2	1422529_s_at	12177	-0.109	-0.2804	No
85	CACNA1G	1423365_at	12295	-0.116	-0.2846	No
86	TAL1	1449389_at	12479	-0.129	-0.2918	No
87	TRIP10	1418092_s_at	12569	-0.134	-0.2946	No
88	GABRG2	1418177_at 1437147_at	12593	-0.135	-0.2944	No
89	MYBPH	1419487_at	12623	-0.137	-0.2944	No
90	WNT4	1450782_at	12722	-0.144	-0.2975	No
91	GABARAP	1416937_at	12739	-0.145	-0.2968	No
92	RAB4B	1451643_a_at	13024	-0.162	-0.3083	No
93	ARHGEF15	1440358_at 1455522_at 1457172_at	13060	-0.165	-0.3084	No
94	SEMA6A	1421414_a_at 1425903_at 1436458_at	13154	-0.171	-0.3110	No
95	MRPL40	1448849_at	13160	-0.172	-0.3096	No
96	RHO	1425171_at 1425172_at 1451617_at 1451618_at	13263	-0.178	-0.3125	No
97	SLC25A29	1423979_a_at 1423980_at 1423981_x_at 1438187_at 1438188_x_at	13313	-0.181	-0.3130	No
98	HARS2	1446462_at 1447677_x_at 1451040_at	13417	-0.189	-0.3160	No
99	OBSCN	1443632_at	13479	-0.193	-0.3169	No
100	MYOG	1419391_at	13558	-0.197	-0.3186	No
101	PCBP2	1421743_a_at 1435881_at	13618	-0.202	-0.3194	No
102	RFX4	1432053_at 1436931_at 1443312_at	13660	-0.205	-0.3193	No
103	MSX1	1417127_at 1448601_s_at	13678	-0.207	-0.3181	No
104	NDUFS2	1451096_at	13769	-0.212	-0.3202	No
105	PLA2G4D	1453405_at	13924	-0.223	-0.3251	No
106	CRMP1	1448289_at	13931	-0.224	-0.3232	No
107	SLC7A10	1421093_at	13969	-0.226	-0.3227	No
108	AKT3	1422078_at 1435260_at 1435879_at 1443222_at 1460307_at	14140	-0.237	-0.3283	No
109	COX7A2L	1421772_a_at 1432263_a_at 1432264_x_at	14141	-0.237	-0.3260	No
110	NKX2-3	1425827_at 1427741_x_at 1452528_a_at	14259	-0.246	-0.3290	No
111	EMILIN1	1416414_at 1431834_a_at	14428	-0.257	-0.3342	No
112	LRP8	1421459_a_at 1440882_at 1442347_at	14618	-0.273	-0.3403	No
113	OTOP2	1443043_at	14649	-0.275	-0.3390	No
114	MGEA5	1422900_at 1422901_at 1422902_s_at 1433654_at 1439081_at	14763	-0.283	-0.3415	No
115	LAG3	1449911_at	14857	-0.289	-0.3430	No
116	CIC	1415746_at	15350	-0.325	-0.3625	No
117	ARID4A	1436191_at 1438464_at 1456420_at	15431	-0.331	-0.3630	No
118	IMMT	1429533_at 1429534_a_at 1433470_a_at 1437126_at	15434	-0.332	-0.3599	No
119	FKBP2	1450694_at	15534	-0.339	-0.3612	No
120	HOXC10	1439798_at	15542	-0.340	-0.3582	No
121	PRDM10	1441764_at 1444812_at	15661	-0.349	-0.3603	No
122	HEBP1	1418172_at 1457903_at	15901	-0.369	-0.3677	No
123	JPH4	1439031_at	16204	-0.394	-0.3778	No
124	TCF7	1433471_at 1450461_at	16395	-0.411	-0.3826	No
125	NFKBIA	1420088_at 1420089_at 1438157_s_at 1448306_at 1449731_s_at	16399	-0.411	-0.3788	No
126	GPR4	1457745_at	16443	-0.416	-0.3768	No
127	PHF12	1434922_at 1453579_at	16518	-0.422	-0.3761	No
128	PPY	1420440_at	16545	-0.425	-0.3732	No
129	HIRA	1436241_s_at 1450049_a_at 1450050_at 1459103_at	16624	-0.431	-0.3726	No
130	CACNB1	1425777_at 1426108_s_at 1440940_at 1451834_at	16725	-0.439	-0.3730	No
131	ADAMTS4	1452595_at	16792	-0.447	-0.3717	No
132	LCAT	1417043_at	16960	-0.464	-0.3749	No
133	DHH	1422127_at 1434959_at	17062	-0.475	-0.3750	No
134	NPC2	1416901_at 1443266_at 1448513_a_at 1455768_at	17101	-0.479	-0.3721	No
135	PSD	1435780_at	17312	-0.500	-0.3770	No
136	DLX1	1449470_at	17325	-0.502	-0.3727	No
137	RABGGTA	1426046_a_at	17462	-0.518	-0.3740	No
138	CXCR4	1448710_at	17598	-0.531	-0.3751	No
139	RAB1B	1424064_at	17953	-0.577	-0.3858	No
140	SOX5	1423500_a_at 1432189_a_at 1432190_at 1440827_x_at 1446461_at 1452511_at 1459261_at	18107	-0.598	-0.3871	No
141	PRKCBP1	1426614_at 1429415_at 1445827_at 1456143_at 1458617_at	18328	-0.627	-0.3911	Yes
142	LMOD3	1439658_at	18434	-0.642	-0.3898	Yes
143	SLC2A4	1415958_at 1415959_at	18487	-0.650	-0.3859	Yes
144	KLK9	1431681_at	18517	-0.656	-0.3810	Yes
145	CPNE1	1433439_at	18590	-0.666	-0.3779	Yes
146	NGFB	1419675_at	18653	-0.675	-0.3742	Yes
147	THRAP1	1436904_at 1438725_at 1444068_at 1446840_at 1453160_at 1453161_at	18741	-0.691	-0.3716	Yes
148	ZFPM1	1423603_at 1451046_at	18975	-0.726	-0.3753	Yes
149	UPF2	1435030_at 1445777_at	19004	-0.730	-0.3695	Yes
150	NXF1	1416791_a_at	19065	-0.741	-0.3652	Yes
151	RHOG	1422572_at	19100	-0.748	-0.3595	Yes
152	DCTN1	1422521_at 1435414_s_at	19269	-0.779	-0.3598	Yes
153	NCDN	1416852_a_at 1416853_at	19309	-0.786	-0.3540	Yes
154	DDX17	1437773_x_at 1439037_at 1452155_a_at	19502	-0.822	-0.3549	Yes
155	ANXA4	1421223_a_at 1424176_a_at 1443341_at 1457658_x_at	19503	-0.822	-0.3470	Yes
156	GBA2	1419980_at 1434271_at	19505	-0.822	-0.3391	Yes
157	PYGO2	1428249_at	19529	-0.827	-0.3322	Yes
158	CREB3L2	1437396_at 1442080_at 1452381_at	19842	-0.894	-0.3380	Yes
159	MNT	1418192_at	19924	-0.914	-0.3329	Yes
160	BRPF1	1460402_at	20016	-0.937	-0.3280	Yes
161	BOC	1426869_at 1427516_a_at 1427517_at	20210	-0.984	-0.3274	Yes
162	DLGAP4	1426465_at 1455548_at	20260	-0.998	-0.3201	Yes
163	RASGRP2	1417804_at 1438932_at 1438933_x_at 1442264_at 1449613_at	20346	-1.013	-0.3143	Yes
164	TITF1	1422346_at	20446	-1.035	-0.3088	Yes
165	RBBP6	1425114_at 1425115_at 1425421_at 1426487_a_at 1453611_at	20531	-1.057	-0.3025	Yes
166	RBM12	1416928_at 1416929_at 1456964_at 1457934_at	20550	-1.064	-0.2931	Yes
167	POLD4	1427885_at	20622	-1.085	-0.2859	Yes
168	TUBA1	1418884_x_at	20768	-1.142	-0.2816	Yes
169	BAHD1	1433703_s_at	20864	-1.185	-0.2746	Yes
170	FLI1	1422024_at 1433512_at 1441584_at	21162	-1.346	-0.2753	Yes
171	ZFP36	1452519_a_at	21206	-1.378	-0.2640	Yes
172	SH3BP1	1460222_at	21248	-1.417	-0.2522	Yes
173	TUBA4	1417373_a_at 1417374_at 1417375_at	21293	-1.454	-0.2402	Yes
174	PLEC1	1419835_s_at 1434610_at 1437554_at	21346	-1.505	-0.2282	Yes
175	NRGN	1423231_at	21361	-1.514	-0.2142	Yes
176	GNAO1	1421152_a_at 1448031_at 1460383_at	21374	-1.524	-0.2001	Yes
177	DMPK	1422989_a_at 1434944_at	21442	-1.597	-0.1878	Yes
178	ETV1	1422607_at 1445314_at 1450684_at	21566	-1.747	-0.1766	Yes
179	DPF2	1416534_at 1429903_at	21596	-1.808	-0.1606	Yes
180	VASP	1451097_at	21643	-1.914	-0.1443	Yes
181	EDG1	1423571_at	21820	-2.744	-0.1259	Yes
182	SESN3	1449303_at 1453313_at	21827	-2.823	-0.0990	Yes
183	CNN2	1450981_at	21853	-3.054	-0.0708	Yes
184	CKB	1455106_a_at	21906	-3.736	-0.0372	Yes
185	NR4A1	1416505_at	21917	-3.996	0.0008	Yes