Details for gene set V$AML1

Table: GSEA Results Summary

Dataset	Set_02_BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_BT_ATM_minus_versus_ATM_plus.cls#BT_ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$AML1_Q6
Enrichment Score (ES)	-0.39868718
Normalized Enrichment Score (NES)	-1.6697302
Nominal p-value	0.0
FDR q-value	0.039094035
FWER p-Value	0.383

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	LCK	1425396_a_at 1439145_at 1439146_s_at 1457917_at	50	2.528	0.0170	No
2	PTK9	1420873_at 1420874_at 1420875_at	310	1.662	0.0178	No
3	MYOD1	1418420_at 1447675_x_at	372	1.607	0.0272	No
4	COL4A1	1426348_at 1452035_at	535	1.408	0.0305	No
5	GPATC2	1420528_at 1440329_s_at 1445189_at 1452498_at 1458566_at	679	1.284	0.0337	No
6	JDP2	1424972_at 1450350_a_at	708	1.267	0.0421	No
7	ATP2A2	1416551_at 1427250_at 1427251_at 1437797_at 1443551_at 1452363_a_at 1458927_at	961	1.114	0.0390	No
8	SLC12A6	1436989_s_at 1449878_a_at 1458916_at	1091	1.063	0.0412	No
9	POU2F1	1419716_a_at 1427695_a_at 1427835_at	1100	1.059	0.0489	No
10	GZMB	1419060_at	1103	1.058	0.0569	No
11	DIABLO	1417683_at 1425768_at	1121	1.052	0.0641	No
12	CBL	1434829_at 1446608_at 1450457_at 1455886_at	1207	1.030	0.0681	No
13	PSMA1	1415695_at 1436769_at 1436770_x_at 1458292_at	1340	1.001	0.0697	No
14	RORC	1425792_a_at 1425793_a_at	1595	0.950	0.0652	No
15	CTSK	1450652_at	1639	0.939	0.0704	No
16	ABCD4	1419572_a_at 1427829_at	1728	0.919	0.0734	No
17	CORO1C	1417752_at 1419911_at 1437721_at 1442972_at 1449660_s_at 1459169_at	1968	0.864	0.0690	No
18	SLC37A2	1452492_a_at	2106	0.832	0.0690	No
19	CHES1	1434002_at 1436925_at 1438255_at 1440607_at 1444555_at 1447325_at 1453094_at	2506	0.741	0.0563	No
20	KCNJ1	1418613_at 1418614_at	2632	0.714	0.0561	No
21	PTPN22	1417995_at 1442820_at	2637	0.713	0.0613	No
22	SCEL	1422837_at 1459426_at	2771	0.686	0.0604	No
23	GTF2A1	1421357_at	2776	0.686	0.0655	No
24	SUPT16H	1419741_at 1449578_at 1456449_at	3107	0.625	0.0551	No
25	LMO2	1454086_a_at	3128	0.623	0.0589	No
26	ARHGAP21	1428368_at 1428369_s_at 1445628_at 1447206_at	3136	0.622	0.0633	No
27	MMP14	1416572_at 1448383_at	3213	0.608	0.0645	No
28	CYP17A1	1417017_at	3219	0.607	0.0689	No
29	COL9A2	1450673_at	3246	0.601	0.0723	No
30	MR1	1421898_a_at 1421899_a_at	3288	0.597	0.0749	No
31	ARHGAP12	1431052_at 1444463_at 1451525_at 1451526_at	3558	0.555	0.0668	No
32	RAB5B	1422119_at 1437446_at	3576	0.553	0.0702	No
33	ARHGEF2	1421042_at 1421043_s_at 1427646_a_at	3986	0.501	0.0553	No
34	SCNN1A	1425088_at	4018	0.498	0.0576	No
35	ARNT	1419996_s_at 1421721_a_at 1425064_at 1437042_at 1449696_at	4280	0.465	0.0492	No
36	SCN2B	1430648_at 1436134_at 1457144_at	4301	0.461	0.0518	No
37	SCN3B	1426328_a_at 1435767_at	4379	0.454	0.0517	No
38	NUCB2	1418355_at	4610	0.429	0.0444	No
39	MTX1	1418521_a_at 1418522_at 1447361_at	4734	0.417	0.0419	No
40	SIRT1	1418640_at 1458538_at	4742	0.416	0.0448	No
41	ITGA10	1440235_at	4762	0.414	0.0471	No
42	EMP1	1416529_at 1459171_at	4844	0.405	0.0464	No
43	UBL3	1423461_a_at	5068	0.384	0.0391	No
44	PICALM	1441328_at 1443218_at 1446968_at 1451316_a_at 1455773_at	5120	0.379	0.0397	No
45	RIN1	1424507_at 1437460_x_at	5287	0.364	0.0348	No
46	HOXC4	1422870_at	5361	0.356	0.0342	No
47	TLL2	1421526_at	5365	0.356	0.0368	No
48	NGB	1417996_at 1417997_at	5682	0.328	0.0247	No
49	ANK3	1425202_a_at 1439220_at 1447259_at 1451628_a_at 1457288_at	5718	0.325	0.0256	No
50	ZBTB8	1455193_at	5863	0.311	0.0214	No
51	AKAP3	1421531_at 1456591_x_at	5999	0.300	0.0174	No
52	BLOC1S2	1429048_at	6003	0.300	0.0196	No
53	LUZP1	1416469_at 1448352_at	6023	0.298	0.0210	No
54	SLC2A3	1421924_at 1427770_a_at 1437052_s_at 1455898_x_at	6205	0.284	0.0148	No
55	SCN8A	1423515_at 1439889_at 1442208_at 1451894_a_at 1457412_at 1458693_at	6238	0.281	0.0155	No
56	RGS1	1417601_at	6520	0.259	0.0046	No
57	MAMDC1	1442206_at 1442561_at 1445372_at 1458147_at	6626	0.251	0.0017	No
58	CREM	1418322_at 1430598_at 1430847_a_at 1449037_at	6668	0.248	0.0017	No
59	PDZK1	1431701_a_at	6918	0.229	-0.0080	No
60	PAX6	1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at	6943	0.227	-0.0074	No
61	SLITRK5	1429718_at	7019	0.221	-0.0092	No
62	FCER1G	1418340_at	7020	0.221	-0.0075	No
63	RCOR2	1417302_at	7191	0.209	-0.0137	No
64	ATF7IP	1446323_at 1449192_at 1454973_at 1459096_at	7337	0.200	-0.0188	No
65	CUGBP1	1423932_at 1425932_a_at 1426407_at 1426408_at 1427413_a_at	7584	0.182	-0.0288	No
66	KCTD4	1420537_at 1441801_at	7598	0.182	-0.0280	No
67	RICS	1438451_at 1447099_at	7654	0.177	-0.0291	No
68	DDX23	1430050_at	7679	0.175	-0.0289	No
69	NRAS	1422688_a_at 1454060_a_at	7939	0.159	-0.0396	No
70	PDE3B	1433694_at	8088	0.147	-0.0453	No
71	FOXD2	1450289_at	8232	0.137	-0.0508	No
72	HOXC6	1427361_at 1427362_x_at 1427454_at	8275	0.134	-0.0517	No
73	IL23A	1419529_at	8411	0.126	-0.0570	No
74	DAB1	1421100_a_at 1427307_a_at 1427308_at 1435577_at 1435578_s_at	9159	0.080	-0.0907	No
75	THBS3	1416623_at	9234	0.075	-0.0935	No
76	PRICKLE1	1441663_at 1442172_at 1442400_at 1444759_at 1452249_at 1457637_at	9454	0.061	-0.1031	No
77	IFNG	1425947_at	10234	0.011	-0.1389	No
78	NAV3	1459440_at	10451	-0.003	-0.1488	No
79	MMP13	1417256_at	10497	-0.005	-0.1508	No
80	AGTRL1	1423037_at 1438651_a_at	10511	-0.006	-0.1514	No
81	PDZRN4	1456512_at	10560	-0.009	-0.1535	No
82	DKK1	1420360_at 1458232_at	10571	-0.010	-0.1539	No
83	CLDN10	1426147_s_at	10915	-0.033	-0.1694	No
84	MIZF	1440255_at	10995	-0.038	-0.1727	No
85	FGD4	1425037_at 1426041_a_at 1426042_at 1451659_at 1455337_at	11188	-0.049	-0.1812	No
86	MPL	1421461_at 1451919_a_at	11548	-0.071	-0.1972	No
87	MOAP1	1431823_at 1448787_at	11609	-0.075	-0.1993	No
88	HDGF	1415888_at 1419964_s_at 1449681_at	11732	-0.083	-0.2043	No
89	MATN1	1418477_at	11902	-0.093	-0.2114	No
90	DNM3	1425403_at 1436624_at 1436875_at 1438801_at 1445540_at 1446265_at 1446431_at 1446694_at 1457405_at	11909	-0.093	-0.2109	No
91	TBX5	1425694_at 1425695_at	12080	-0.103	-0.2180	No
92	WNT8B	1421439_at	12331	-0.119	-0.2285	No
93	MAP3K11	1450669_at	13441	-0.190	-0.2781	No
94	SLC6A9	1417636_at 1431812_a_at	13787	-0.213	-0.2923	No
95	RASAL2	1436910_at 1444671_at	13821	-0.216	-0.2922	No
96	EIF2B3	1434524_at	13884	-0.221	-0.2933	No
97	CRTAC1	1426606_at 1452936_at 1457474_at 1459858_x_at	13930	-0.224	-0.2937	No
98	BLOC1S1	1422614_s_at	13959	-0.225	-0.2933	No
99	NHLRC2	1429145_at 1433929_at 1444863_at 1453048_at 1457312_at	14165	-0.239	-0.3009	No
100	PGF	1418471_at	14171	-0.239	-0.2993	No
101	COL4A2	1424051_at	14413	-0.256	-0.3084	No
102	TACSTD2	1423323_at	14522	-0.265	-0.3114	No
103	ANXA8	1417732_at 1425789_s_at	14578	-0.270	-0.3118	No
104	NDUFA9	1416663_at	14641	-0.274	-0.3126	No
105	KIF1B	1423994_at 1423995_at 1425270_at 1451200_at 1451642_at 1451762_a_at 1455182_at 1458426_at	14707	-0.279	-0.3134	No
106	HIVEP3	1421150_at 1429134_at 1439660_at 1450132_at 1458802_at	14960	-0.297	-0.3228	No
107	GPD1	1416204_at 1439396_x_at 1448249_at 1456732_at	15221	-0.316	-0.3323	No
108	RAB39	1437762_at	15375	-0.327	-0.3368	No
109	SFRS4	1448778_at	15437	-0.332	-0.3371	No
110	EIF3S1	1426394_at 1426395_s_at 1452052_s_at	15468	-0.335	-0.3359	No
111	STRC	1421695_at	15847	-0.364	-0.3505	No
112	PXN	1424027_at 1426085_a_at 1456135_s_at	15926	-0.371	-0.3513	No
113	TBK1	1422469_at 1445571_at 1460315_s_at	16092	-0.385	-0.3559	No
114	MKRN3	1418160_at	16133	-0.388	-0.3548	No
115	JMJD1C	1426900_at 1439998_at 1441592_at 1448049_at 1458521_at	16149	-0.389	-0.3526	No
116	PCF11	1427159_at 1427160_at 1428724_at 1456489_at	16310	-0.403	-0.3568	No
117	GRASP	1441894_s_at 1442616_at 1460206_at	16326	-0.404	-0.3544	No
118	ACSL5	1428082_at	16421	-0.413	-0.3556	No
119	TNFSF4	1421744_at	16423	-0.413	-0.3525	No
120	INPPL1	1460394_a_at	16440	-0.415	-0.3501	No
121	ANKRD1	1420991_at 1420992_at	16447	-0.416	-0.3472	No
122	EDARADD	1421213_at 1433132_at 1433133_at 1437800_at	16628	-0.431	-0.3522	No
123	SLC37A4	1417042_at	16679	-0.436	-0.3511	No
124	ADAMTS4	1452595_at	16792	-0.447	-0.3529	No
125	BTG4	1426520_at	17191	-0.488	-0.3674	No
126	LMO3	1455754_at	17198	-0.489	-0.3640	No
127	RDH5	1418808_at 1421702_at	17343	-0.504	-0.3668	No
128	VRK1	1425006_a_at 1458951_at	17389	-0.510	-0.3649	No
129	ADAMTS8	1418270_at 1444174_at	17477	-0.520	-0.3650	No
130	ENTPD1	1423326_at 1450939_at 1453586_at	17531	-0.524	-0.3634	No
131	NRXN3	1419825_at 1431153_at 1432931_at 1433788_at 1438193_at 1439629_at 1442423_at 1444700_at 1456137_at 1460101_at	17615	-0.534	-0.3632	No
132	SOX5	1423500_a_at 1432189_a_at 1432190_at 1440827_x_at 1446461_at 1452511_at 1459261_at	18107	-0.598	-0.3812	No
133	PDE6H	1450765_a_at 1450766_at	18406	-0.637	-0.3900	No
134	RASGEF1A	1429316_at 1435218_at	18432	-0.642	-0.3863	No
135	IGSF4	1417376_a_at 1417377_at 1417378_at 1431611_a_at	18481	-0.649	-0.3835	No
136	BCAR3	1415936_at 1431564_at	18812	-0.699	-0.3934	Yes
137	AP1G2	1419113_at	18828	-0.702	-0.3887	Yes
138	NFRKB	1434753_at 1445551_at	18921	-0.717	-0.3874	Yes
139	RHOG	1422572_at	19100	-0.748	-0.3899	Yes
140	PLXNC1	1423213_at 1423214_at 1443433_at 1443434_s_at 1450905_at 1450906_at	19166	-0.757	-0.3871	Yes
141	DGKA	1418578_at	19270	-0.779	-0.3859	Yes
142	TCF12	1421908_a_at 1427670_a_at 1438762_at 1439209_at 1439619_at 1443012_at 1444620_at 1445093_at 1445133_at 1457524_at 1458337_at	19284	-0.782	-0.3806	Yes
143	ATP6V0B	1416769_s_at 1425448_x_at 1437013_x_at	19351	-0.793	-0.3775	Yes
144	LY9	1449156_at	19355	-0.793	-0.3716	Yes
145	TPM1	1423049_a_at 1423721_at 1447713_at 1456623_at	19366	-0.796	-0.3660	Yes
146	XCL1	1419412_at	19454	-0.812	-0.3638	Yes
147	RAB30	1426452_a_at	19627	-0.847	-0.3653	Yes
148	SNX1	1416260_a_at	19787	-0.883	-0.3658	Yes
149	RGS18	1420398_at 1449856_at	19955	-0.923	-0.3665	Yes
150	NOTCH2	1451889_at 1455556_at	19986	-0.930	-0.3608	Yes
151	DACT1	1417937_at	19988	-0.930	-0.3537	Yes
152	ARF3	1421789_s_at 1423973_a_at 1434787_at 1437331_a_at 1456007_at	20058	-0.947	-0.3497	Yes
153	IBRDC3	1432478_a_at 1435226_at	20225	-0.991	-0.3497	Yes
154	MRPS31	1417737_at 1443165_at	20424	-1.030	-0.3510	Yes
155	TITF1	1422346_at	20446	-1.035	-0.3441	Yes
156	GRK5	1446361_at 1446998_at 1449514_at	20463	-1.039	-0.3369	Yes
157	RAG1	1440574_at 1450680_at	20591	-1.074	-0.3345	Yes
158	EIF2C1	1434331_at	20648	-1.092	-0.3288	Yes
159	CD69	1428735_at	20877	-1.192	-0.3301	Yes
160	SEMA4A	1438934_x_at 1448110_at	20900	-1.208	-0.3219	Yes
161	HLX1	1418939_at	20908	-1.211	-0.3130	Yes
162	SLC15A3	1420697_at	20909	-1.212	-0.3038	Yes
163	CRY1	1433733_a_at	20916	-1.215	-0.2948	Yes
164	FGF4	1420085_at 1420086_x_at 1449729_at 1450282_at	20981	-1.245	-0.2882	Yes
165	CAP1	1417461_at 1417462_at	21047	-1.281	-0.2815	Yes
166	CD6	1451910_a_at	21125	-1.321	-0.2749	Yes
167	FLI1	1422024_at 1433512_at 1441584_at	21162	-1.346	-0.2663	Yes
168	STAT2	1421911_at 1450403_at	21181	-1.359	-0.2568	Yes
169	ID3	1416630_at	21267	-1.433	-0.2497	Yes
170	MADD	1425735_at 1455502_at	21306	-1.464	-0.2403	Yes
171	ACIN1	1416568_a_at 1421197_a_at	21392	-1.549	-0.2324	Yes
172	VIM	1438118_x_at 1450641_at 1456292_a_at	21441	-1.597	-0.2224	Yes
173	DNAJC14	1426553_at 1437546_at 1437547_s_at	21502	-1.664	-0.2125	Yes
174	BMF	1422995_at 1454880_s_at 1458325_x_at	21575	-1.757	-0.2024	Yes
175	HIPK1	1421298_a_at 1424540_at 1457515_at	21619	-1.856	-0.1902	Yes
176	BATF	1419410_at	21644	-1.915	-0.1767	Yes
177	S100A9	1448756_at	21769	-2.327	-0.1647	Yes
178	TACC2	1425745_a_at 1447891_at	21836	-2.894	-0.1456	Yes
179	PACS1	1420112_at 1435762_at 1440014_at 1449737_at 1459707_at	21847	-2.951	-0.1236	Yes
180	TNNT2	1418726_a_at 1424967_x_at 1440424_at	21869	-3.198	-0.1001	Yes
181	ITGB7	1418741_at	21870	-3.202	-0.0757	Yes
182	NR4A1	1416505_at	21917	-3.996	-0.0473	Yes
183	EGR2	1427682_a_at 1427683_at	21930	-6.298	0.0002	Yes