Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_02_BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus_repos |
| Phenotype | phenotype_BT_ATM_minus_versus_ATM_plus.cls#BT_ATM_minus_versus_ATM_plus_repos |
| Upregulated in class | BT_ATM_minus |
| GeneSet | REACTOME_DOUBLE_STRAND_BREAK_REPAIR |
| Enrichment Score (ES) | 0.5481365 |
| Normalized Enrichment Score (NES) | 1.5349226 |
| Nominal p-value | 0.04474273 |
| FDR q-value | 0.5332564 |
| FWER p-Value | 1.0 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | PRKDC | 1451576_at | 457 | 1.506 | 0.1752 | Yes | ||
| 2 | XRCC6 | 1417437_at 1428504_at 1442250_at | 2329 | 0.781 | 0.1914 | Yes | ||
| 3 | LIG4 | 1439487_at | 2463 | 0.751 | 0.2830 | Yes | ||
| 4 | MRE11A | 1416748_a_at 1441990_at 1458509_at | 2623 | 0.716 | 0.3690 | Yes | ||
| 5 | XRCC4 | 1424601_at 1424602_s_at 1445922_at | 3434 | 0.573 | 0.4066 | Yes | ||
| 6 | NBN | 1448746_at | 4217 | 0.471 | 0.4321 | Yes | ||
| 7 | RPA2 | 1416433_at 1454011_a_at | 4222 | 0.470 | 0.4931 | Yes | ||
| 8 | ATM | 1421205_at 1428830_at | 4327 | 0.459 | 0.5481 | Yes | ||
| 9 | XRCC5 | 1451968_at | 5429 | 0.350 | 0.5434 | No | ||
| 10 | BRCA2 | 1419076_a_at | 10221 | 0.012 | 0.3264 | No | ||
| 11 | RPA3 | 1448938_at | 10539 | -0.008 | 0.3129 | No | ||
| 12 | RAD52 | 1416602_a_at 1426296_at | 11201 | -0.050 | 0.2893 | No | ||
| 13 | RAD51 | 1418281_at | 13482 | -0.193 | 0.2104 | No | ||
| 14 | H2AFX | 1416746_at | 13647 | -0.204 | 0.2295 | No | ||
| 15 | BRCA1 | 1424629_at 1424630_a_at 1427698_at 1443763_at 1451417_at | 14796 | -0.286 | 0.2143 | No | ||
| 16 | LIG1 | 1416641_at | 16208 | -0.394 | 0.2012 | No | ||
| 17 | RPA1 | 1423293_at 1437309_a_at 1441240_at | 16927 | -0.461 | 0.2284 | No |
