Dataset | Set_02_ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus_repos |
Phenotype | phenotype_ATM_minus_versus_BT_ATM_minus.cls#ATM_minus_versus_BT_ATM_minus_repos |
Upregulated in class | BT_ATM_minus |
GeneSet | GOLGI_APPARATUS |
Enrichment Score (ES) | -0.39274117 |
Normalized Enrichment Score (NES) | -1.6612568 |
Nominal p-value | 0.0 |
FDR q-value | 0.53108335 |
FWER p-Value | 1.0 |
PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|---|
1 | KDELR2 | 1417204_at 1417205_at | 77 | 6.312 | 0.0193 | No | ||
2 | ARL1 | 1447089_at 1447090_s_at 1451025_at | 407 | 4.152 | 0.0192 | No | ||
3 | BNIP3 | 1422470_at | 649 | 3.529 | 0.0209 | No | ||
4 | LMAN1 | 1428129_at 1428130_at 1444037_at 1452671_s_at | 763 | 3.320 | 0.0278 | No | ||
5 | CHST5 | 1419320_at | 1161 | 2.819 | 0.0197 | No | ||
6 | SCYL3 | 1428918_at 1446655_at 1452960_at | 1269 | 2.714 | 0.0246 | No | ||
7 | GOLGA1 | 1431120_a_at 1432054_at 1435027_at 1446087_at | 1470 | 2.519 | 0.0246 | No | ||
8 | PCSK2 | 1428305_at 1444147_at 1447991_at 1447992_s_at 1448312_at | 1652 | 2.365 | 0.0248 | No | ||
9 | STIP1 | 1415909_at | 2149 | 2.049 | 0.0094 | No | ||
10 | CXCL14 | 1418456_a_at 1418457_at | 2281 | 1.985 | 0.0106 | No | ||
11 | GLCE | 1425876_a_at 1428374_at 1440386_at | 2350 | 1.958 | 0.0145 | No | ||
12 | ARCN1 | 1423743_at 1436062_at 1444372_at 1451089_a_at | 2438 | 1.924 | 0.0175 | No | ||
13 | ITM2C | 1415961_at | 2533 | 1.883 | 0.0200 | No | ||
14 | GKAP1 | 1417594_at | 2607 | 1.857 | 0.0234 | No | ||
15 | LAPTM4A | 1423368_at | 2776 | 1.797 | 0.0222 | No | ||
16 | ENTPD4 | 1431761_at 1438177_x_at 1447900_x_at 1449190_a_at | 2822 | 1.779 | 0.0265 | No | ||
17 | RAB14 | 1415686_at 1419243_at 1419244_a_at 1419245_at 1419246_s_at 1439687_at 1441992_at | 2995 | 1.722 | 0.0249 | No | ||
18 | COG7 | 1443486_at | 3669 | 1.515 | -0.0006 | No | ||
19 | AP3B2 | 1426927_at 1445224_at 1451837_at | 3680 | 1.512 | 0.0044 | No | ||
20 | YKT6 | 1448464_at 1460191_at | 3760 | 1.493 | 0.0062 | No | ||
21 | VAPB | 1423152_at 1436079_s_at 1445370_at 1458501_at | 3782 | 1.484 | 0.0106 | No | ||
22 | OPTN | 1429778_at 1435679_at | 3834 | 1.468 | 0.0136 | No | ||
23 | FUT4 | 1450834_at 1455843_at | 3840 | 1.467 | 0.0187 | No | ||
24 | COPG2 | 1448761_a_at | 3958 | 1.437 | 0.0185 | No | ||
25 | KIF20A | 1449207_a_at | 4038 | 1.412 | 0.0200 | No | ||
26 | RAB11A | 1449256_a_at | 4062 | 1.405 | 0.0240 | No | ||
27 | TMED10 | 1424707_at 1424708_at | 4378 | 1.320 | 0.0143 | No | ||
28 | SI | 1422523_at | 4553 | 1.268 | 0.0109 | No | ||
29 | SLC30A5 | 1422497_at | 4817 | 1.204 | 0.0032 | No | ||
30 | STX5 | 1419952_at 1448267_at 1449679_s_at | 4853 | 1.197 | 0.0059 | No | ||
31 | PSEN2 | 1425869_a_at 1431542_at | 4889 | 1.188 | 0.0086 | No | ||
32 | RAB30 | 1426452_a_at | 5013 | 1.158 | 0.0071 | No | ||
33 | ACO1 | 1423644_at 1456728_x_at | 5089 | 1.143 | 0.0078 | No | ||
34 | MPHOSPH9 | 1419909_at 1419910_at 1431053_at 1438063_at 1440915_at 1449659_s_at | 5168 | 1.130 | 0.0083 | No | ||
35 | PTGDS | 1423859_a_at 1423860_at | 5232 | 1.117 | 0.0095 | No | ||
36 | SECTM1 | 1419478_at 1419479_at | 5359 | 1.095 | 0.0076 | No | ||
37 | PSEN1 | 1420261_at 1421853_at 1425549_at 1450399_at | 5624 | 1.041 | -0.0007 | No | ||
38 | FUT9 | 1435308_at 1450771_at 1457409_at | 5782 | 1.012 | -0.0043 | No | ||
39 | COG8 | 1420265_x_at 1420266_at 1423617_at 1426821_at 1447860_x_at 1451052_at | 5898 | 0.992 | -0.0060 | No | ||
40 | CLN5 | 1426886_at | 5922 | 0.987 | -0.0035 | No | ||
41 | BET1 | 1416866_at 1416867_at | 5940 | 0.984 | -0.0007 | No | ||
42 | COPB1 | 1423301_at | 6018 | 0.969 | -0.0007 | No | ||
43 | COPG | 1415670_at 1416017_at | 6296 | 0.925 | -0.0101 | No | ||
44 | ARFIP1 | 1454916_s_at | 6595 | 0.869 | -0.0207 | No | ||
45 | RAB6A | 1447776_x_at 1448304_a_at 1448305_at | 6613 | 0.866 | -0.0183 | No | ||
46 | COPB2 | 1452102_at 1456175_a_at | 6673 | 0.854 | -0.0179 | No | ||
47 | NBEA | 1452251_at | 7166 | 0.769 | -0.0378 | No | ||
48 | PKN3 | 1434525_at | 7169 | 0.769 | -0.0351 | No | ||
49 | DOPEY1 | 1435295_at 1442855_at | 7230 | 0.757 | -0.0351 | No | ||
50 | KCNA5 | 1417680_at | 7721 | 0.680 | -0.0552 | No | ||
51 | APH1A | 1424979_at 1424980_s_at 1451554_a_at | 7833 | 0.659 | -0.0579 | No | ||
52 | GOLGA5 | 1418447_at | 8004 | 0.631 | -0.0634 | No | ||
53 | HOOK3 | 1443857_at 1446737_a_at | 8028 | 0.627 | -0.0622 | No | ||
54 | B3GALT6 | 1421155_at 1435252_at 1440340_at | 8075 | 0.618 | -0.0621 | No | ||
55 | PPT1 | 1420015_s_at 1420016_at 1422467_at 1422468_at 1444884_at | 8155 | 0.607 | -0.0635 | No | ||
56 | MYO6 | 1421120_at 1433942_at 1435559_at | 8210 | 0.598 | -0.0638 | No | ||
57 | KCNJ6 | 1421581_at 1425044_at 1425707_a_at 1450294_a_at 1451868_at | 8344 | 0.579 | -0.0678 | No | ||
58 | GOPC | 1421191_s_at 1450153_at 1453221_at | 8480 | 0.558 | -0.0720 | No | ||
59 | RER1 | 1460660_x_at 1460706_s_at | 8585 | 0.540 | -0.0749 | No | ||
60 | HIP1 | 1424755_at 1424756_at 1432017_at 1432230_at 1434557_at 1444873_at | 8606 | 0.536 | -0.0738 | No | ||
61 | FUT1 | 1450359_at | 8611 | 0.535 | -0.0721 | No | ||
62 | PLD1 | 1425739_at 1437112_at 1437113_s_at | 8767 | 0.512 | -0.0774 | No | ||
63 | GLA | 1418248_at 1449006_at | 8779 | 0.510 | -0.0760 | No | ||
64 | SLC35A3 | 1424579_at 1424580_at 1429648_at 1429649_at | 8835 | 0.498 | -0.0767 | No | ||
65 | FUT10 | 1427617_at 1437388_at 1454924_at | 9233 | 0.438 | -0.0934 | No | ||
66 | PAMCI | 1427942_at | 9338 | 0.423 | -0.0967 | No | ||
67 | NTSR1 | 1420799_at | 9461 | 0.406 | -0.1008 | No | ||
68 | SEC14L1 | 1451908_a_at 1453412_a_at | 9469 | 0.405 | -0.0997 | No | ||
69 | AP3B1 | 1423235_at 1450915_at | 9961 | 0.328 | -0.1211 | No | ||
70 | MAN1C1 | 1436193_at | 9963 | 0.327 | -0.1199 | No | ||
71 | CHST4 | 1453393_a_at | 10021 | 0.318 | -0.1214 | No | ||
72 | ATP7B | 1421563_at 1446004_at 1450283_at | 10162 | 0.298 | -0.1268 | No | ||
73 | FGD4 | 1425037_at 1426041_a_at 1426042_at 1451659_at 1455337_at | 10302 | 0.274 | -0.1322 | No | ||
74 | COPZ1 | 1447834_at 1451825_a_at | 10358 | 0.265 | -0.1337 | No | ||
75 | HERC1 | 1425378_at 1434060_at 1440437_at 1440903_at | 10413 | 0.258 | -0.1353 | No | ||
76 | AP3D1 | 1417964_at 1445280_at | 10426 | 0.256 | -0.1349 | No | ||
77 | COG5 | 1435298_at 1445806_at | 10486 | 0.246 | -0.1367 | No | ||
78 | BACE1 | 1421824_at 1421825_at 1436956_at 1450384_at 1455826_a_at | 10554 | 0.236 | -0.1389 | No | ||
79 | STX16 | 1429237_at | 10719 | 0.212 | -0.1457 | No | ||
80 | PKMYT1 | 1418481_at 1438601_at | 10847 | 0.193 | -0.1509 | No | ||
81 | DNM1L | 1428008_at 1428086_at 1428087_at 1452638_s_at | 11032 | 0.165 | -0.1587 | No | ||
82 | PCSK5 | 1424605_at 1437339_s_at 1438248_at 1451406_a_at 1452475_at 1459124_at | 11077 | 0.158 | -0.1602 | No | ||
83 | SLC35B2 | 1423927_at 1429007_at | 11282 | 0.126 | -0.1691 | No | ||
84 | GOSR1 | 1416215_at 1448256_at | 11290 | 0.125 | -0.1690 | No | ||
85 | TYR | 1417717_a_at 1448821_at 1456095_at | 11309 | 0.121 | -0.1694 | No | ||
86 | STEAP2 | 1428636_at 1438773_at 1442359_at 1444290_at 1446071_at | 11352 | 0.115 | -0.1709 | No | ||
87 | ATXN2 | 1419866_s_at 1438143_s_at 1438144_x_at 1443516_at 1459363_at 1460653_at | 11424 | 0.105 | -0.1738 | No | ||
88 | M6PRBP1 | 1416424_at | 11445 | 0.104 | -0.1743 | No | ||
89 | VAMP4 | 1422895_at 1422896_at 1434796_at | 11486 | 0.096 | -0.1758 | No | ||
90 | FUT7 | 1420756_at | 11554 | 0.087 | -0.1786 | No | ||
91 | UNC13B | 1417757_at 1443308_at | 11758 | 0.053 | -0.1877 | No | ||
92 | HS3ST1 | 1423450_a_at | 11786 | 0.048 | -0.1888 | No | ||
93 | DYNC2H1 | 1429250_at | 11802 | 0.044 | -0.1893 | No | ||
94 | RAB36 | 1431136_at 1436471_at 1455064_at | 11812 | 0.043 | -0.1896 | No | ||
95 | AP1G1 | 1423388_at 1434081_at 1460658_at 1460712_s_at | 11956 | 0.021 | -0.1961 | No | ||
96 | AP3S2 | 1422718_at 1428044_at 1435718_at 1436525_at 1441993_at 1444413_at | 12081 | 0.003 | -0.2018 | No | ||
97 | ANK3 | 1425202_a_at 1439220_at 1447259_at 1451628_a_at 1457288_at | 12400 | -0.053 | -0.2162 | No | ||
98 | FGD5 | 1460578_at | 12505 | -0.072 | -0.2207 | No | ||
99 | TMEM43 | 1426434_at 1439418_x_at | 12552 | -0.082 | -0.2225 | No | ||
100 | SLC35A1 | 1417538_at 1417539_at | 12607 | -0.092 | -0.2247 | No | ||
101 | FGD1 | 1416865_at 1437369_at 1459278_at | 12688 | -0.103 | -0.2280 | No | ||
102 | LDLRAP1 | 1424378_at 1457162_at | 12866 | -0.133 | -0.2357 | No | ||
103 | SPG21 | 1451036_at | 13036 | -0.164 | -0.2428 | No | ||
104 | CORO7 | 1428147_at 1428148_s_at 1428149_at 1428150_at 1437146_x_at 1437524_x_at | 13108 | -0.175 | -0.2455 | No | ||
105 | GOLGB1 | 1433135_at 1435032_at 1460535_at | 13141 | -0.179 | -0.2463 | No | ||
106 | FGD2 | 1419515_at | 13161 | -0.183 | -0.2465 | No | ||
107 | OPRM1 | 1425432_at 1441791_at 1451705_a_at 1451709_at 1459402_at | 13288 | -0.205 | -0.2516 | No | ||
108 | CSPG5 | 1450713_at | 13345 | -0.214 | -0.2534 | No | ||
109 | FGD6 | 1419322_at 1435467_at | 13413 | -0.225 | -0.2556 | No | ||
110 | CLN3 | 1417551_at 1457789_at | 13611 | -0.260 | -0.2637 | No | ||
111 | IL15 | 1418219_at | 13712 | -0.280 | -0.2673 | No | ||
112 | CEP57 | 1428968_at 1452983_at | 13788 | -0.291 | -0.2697 | No | ||
113 | CAV1 | 1449145_a_at | 14284 | -0.376 | -0.2911 | No | ||
114 | GOLGA3 | 1419159_at 1419160_at 1449616_s_at | 14405 | -0.400 | -0.2952 | No | ||
115 | ATP1A3 | 1424856_at 1427481_a_at | 14421 | -0.403 | -0.2944 | No | ||
116 | ACHE | 1422635_at | 14476 | -0.415 | -0.2954 | No | ||
117 | GGA2 | 1428141_at 1457955_at | 14757 | -0.470 | -0.3066 | No | ||
118 | COG1 | 1418354_at 1433774_x_at 1437844_x_at 1449053_s_at 1456740_x_at | 14900 | -0.501 | -0.3113 | No | ||
119 | FUT2 | 1434862_at 1450246_at | 15112 | -0.546 | -0.3190 | No | ||
120 | FGD3 | 1433398_at 1450235_at 1454593_at | 15276 | -0.579 | -0.3244 | No | ||
121 | ICA1 | 1417901_a_at 1431644_a_at | 15350 | -0.593 | -0.3256 | No | ||
122 | MALL | 1425359_at 1435693_at | 15455 | -0.614 | -0.3282 | No | ||
123 | A2BP1 | 1418314_a_at 1438217_at 1447735_x_at 1455358_at 1456921_at | 16036 | -0.748 | -0.3522 | No | ||
124 | RGS19 | 1417786_a_at 1434940_x_at | 16120 | -0.768 | -0.3532 | No | ||
125 | AVPR2 | 1450277_at | 16202 | -0.787 | -0.3541 | No | ||
126 | CHST2 | 1422758_at 1460070_at | 16435 | -0.845 | -0.3617 | No | ||
127 | GNAS | 1421740_at 1427789_s_at 1443007_at 1443375_at 1444767_at 1450186_s_at 1453413_at | 16450 | -0.849 | -0.3592 | No | ||
128 | GOLGA4 | 1417674_s_at 1448803_at 1460213_at | 16590 | -0.881 | -0.3624 | No | ||
129 | RHOT1 | 1423533_a_at 1440853_at | 16655 | -0.899 | -0.3621 | No | ||
130 | CHST10 | 1426620_at | 16765 | -0.929 | -0.3638 | No | ||
131 | TMEM10 | 1435854_at 1447487_at | 16882 | -0.953 | -0.3657 | No | ||
132 | GGA1 | 1423834_s_at 1459863_x_at | 16922 | -0.961 | -0.3640 | No | ||
133 | COPE | 1416384_a_at | 17283 | -1.034 | -0.3768 | No | ||
134 | F2RL1 | 1448931_at | 17291 | -1.035 | -0.3734 | No | ||
135 | TAPBP | 1421812_at 1450378_at | 17595 | -1.113 | -0.3833 | No | ||
136 | PRNP | 1416130_at 1446507_at 1448233_at | 17656 | -1.129 | -0.3819 | No | ||
137 | GALNT4 | 1423637_at 1423638_at 1447318_at 1455915_at 1457849_at | 17661 | -1.130 | -0.3780 | No | ||
138 | RPGR | 1427467_a_at | 17703 | -1.140 | -0.3758 | No | ||
139 | PICK1 | 1419384_at | 17845 | -1.186 | -0.3780 | No | ||
140 | KIF1C | 1424747_at 1426325_at | 17879 | -1.196 | -0.3751 | No | ||
141 | AP4M1 | 1418846_at | 18013 | -1.238 | -0.3768 | No | ||
142 | ATP7A | 1418774_a_at 1436921_at | 18119 | -1.271 | -0.3770 | No | ||
143 | GLG1 | 1417087_at 1448579_at 1448580_at 1460554_s_at | 18166 | -1.286 | -0.3745 | No | ||
144 | ADAM10 | 1450104_at 1460083_at | 18526 | -1.414 | -0.3858 | No | ||
145 | CLASP2 | 1424836_a_at 1427328_a_at 1429976_at 1440802_at 1441726_at 1443320_at 1456911_at | 18543 | -1.424 | -0.3814 | No | ||
146 | AP4B1 | 1416631_at 1421726_at | 18570 | -1.434 | -0.3774 | No | ||
147 | B3GALT5 | 1428397_at 1428398_at 1450528_at 1459801_at | 18904 | -1.581 | -0.3870 | Yes | ||
148 | COPA | 1415706_at 1437274_at | 18909 | -1.587 | -0.3814 | Yes | ||
149 | TRAPPC4 | 1415674_a_at 1429632_at | 18914 | -1.589 | -0.3759 | Yes | ||
150 | COG3 | 1434654_at 1456286_at | 18975 | -1.614 | -0.3728 | Yes | ||
151 | SYNE1 | 1421545_a_at 1455225_at 1455493_at | 19165 | -1.692 | -0.3753 | Yes | ||
152 | PARK2 | 1420755_a_at 1426135_a_at 1449975_a_at | 19174 | -1.694 | -0.3696 | Yes | ||
153 | SLC35B4 | 1416548_at 1416549_at 1416550_at 1431941_at | 19211 | -1.710 | -0.3650 | Yes | ||
154 | OCRL | 1438284_at 1438396_at 1457313_at | 19429 | -1.814 | -0.3684 | Yes | ||
155 | B4GALT1 | 1418014_a_at 1458616_at 1458773_at | 19447 | -1.825 | -0.3626 | Yes | ||
156 | AP1S1 | 1416087_at | 19580 | -1.906 | -0.3618 | Yes | ||
157 | F2R | 1437308_s_at 1450852_s_at | 19581 | -1.907 | -0.3549 | Yes | ||
158 | EXT1 | 1417730_at 1439877_at 1440011_at 1440092_at 1456655_at 1458054_at 1458296_at | 19593 | -1.916 | -0.3484 | Yes | ||
159 | FURIN | 1418518_at | 19626 | -1.944 | -0.3429 | Yes | ||
160 | CALU | 1415870_at 1441477_at | 19801 | -2.075 | -0.3433 | Yes | ||
161 | STS | 1421500_at | 19816 | -2.091 | -0.3364 | Yes | ||
162 | COG2 | 1416932_at | 19898 | -2.164 | -0.3323 | Yes | ||
163 | LARGE | 1417435_at 1417436_at 1441642_at 1442420_at 1443212_at 1458663_at | 19917 | -2.184 | -0.3252 | Yes | ||
164 | LMAN2L | 1435475_at 1441295_at | 19929 | -2.192 | -0.3178 | Yes | ||
165 | TRIM23 | 1426969_at 1429998_at 1456089_at | 20038 | -2.287 | -0.3145 | Yes | ||
166 | SACM1L | 1416500_at 1438900_at | 20056 | -2.300 | -0.3069 | Yes | ||
167 | CLCN3 | 1416610_a_at 1433486_at 1433487_at 1438366_x_at | 20138 | -2.375 | -0.3020 | Yes | ||
168 | CLASP1 | 1427353_at 1452265_at 1459233_at 1460102_at | 20146 | -2.378 | -0.2937 | Yes | ||
169 | AP1G2 | 1419113_at | 20203 | -2.420 | -0.2875 | Yes | ||
170 | MAP4K2 | 1428297_at 1434833_at 1450244_a_at | 20211 | -2.423 | -0.2791 | Yes | ||
171 | GOLGA2 | 1448625_at | 20271 | -2.469 | -0.2729 | Yes | ||
172 | PAK4 | 1428548_at | 20527 | -2.735 | -0.2747 | Yes | ||
173 | COG6 | 1426216_at | 20601 | -2.827 | -0.2678 | Yes | ||
174 | ZFYVE1 | 1435071_at 1435072_at | 20613 | -2.847 | -0.2580 | Yes | ||
175 | COG4 | 1416993_at 1419808_at 1419809_s_at 1443135_at | 20700 | -2.966 | -0.2512 | Yes | ||
176 | RAB1B | 1424064_at | 20788 | -3.081 | -0.2440 | Yes | ||
177 | PSENEN | 1415679_at | 20843 | -3.182 | -0.2350 | Yes | ||
178 | ABCG1 | 1423570_at 1455221_at | 20857 | -3.206 | -0.2240 | Yes | ||
179 | PCSK7 | 1417180_at | 20917 | -3.310 | -0.2147 | Yes | ||
180 | AP1GBP1 | 1435215_at 1442344_at 1457695_at | 21006 | -3.474 | -0.2061 | Yes | ||
181 | TSC2 | 1452105_a_at | 21008 | -3.475 | -0.1936 | Yes | ||
182 | FIS1 | 1416764_at 1443819_x_at | 21029 | -3.513 | -0.1818 | Yes | ||
183 | CENTD2 | 1428064_at | 21050 | -3.561 | -0.1698 | Yes | ||
184 | BET1L | 1422980_a_at 1426372_a_at 1430549_at 1453570_x_at | 21177 | -3.798 | -0.1618 | Yes | ||
185 | RHOT2 | 1426822_at | 21256 | -3.972 | -0.1510 | Yes | ||
186 | EXT2 | 1447319_at 1447743_x_at 1460170_at | 21269 | -4.003 | -0.1371 | Yes | ||
187 | SNX17 | 1455955_s_at | 21403 | -4.357 | -0.1274 | Yes | ||
188 | IGF2R | 1424111_at 1424112_at 1440979_at 1445966_at 1457356_at | 21445 | -4.484 | -0.1131 | Yes | ||
189 | GGA3 | 1438008_at | 21589 | -5.107 | -0.1011 | Yes | ||
190 | GBF1 | 1415709_s_at 1415757_at 1432677_at 1438207_at | 21633 | -5.408 | -0.0835 | Yes | ||
191 | DOPEY2 | 1428330_at 1449904_at | 21648 | -5.506 | -0.0642 | Yes | ||
192 | ATP2C1 | 1431196_at 1434386_at 1437738_at 1439215_at 1442742_at | 21738 | -6.260 | -0.0456 | Yes | ||
193 | B4GALT7 | 1426303_at 1426304_x_at | 21758 | -6.462 | -0.0231 | Yes | ||
194 | NCSTN | 1418570_at 1444532_at | 21863 | -8.594 | 0.0033 | Yes |