Details for gene set PENG_RAPAMYCIN

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus_repos
Phenotype	phenotype_ATM_minus_versus_BT_ATM_minus.cls#ATM_minus_versus_BT_ATM_minus_repos
Upregulated in class	ATM_minus
GeneSet	PENG_RAPAMYCIN_DN
Enrichment Score (ES)	0.5119453
Normalized Enrichment Score (NES)	2.268736
Nominal p-value	0.0
FDR q-value	9.7538857E-4
FWER p-Value	0.0010

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CDC25A	1417131_at 1417132_at 1445995_at	8	9.163	0.0245	Yes
2	TOMM40	1426118_a_at 1459680_at	12	9.093	0.0490	Yes
3	IDH3A	1422500_at 1422501_s_at 1432016_a_at 1447701_x_at	32	8.558	0.0713	Yes
4	AMD1	1448484_at	70	6.462	0.0871	Yes
5	SNRPA1	1417351_a_at 1417352_s_at 1417353_x_at	72	6.411	0.1044	Yes
6	TCP1	1442317_at 1448122_at	73	6.389	0.1217	Yes
7	NOL5A	1426533_at 1455035_s_at	85	6.190	0.1380	Yes
8	DDX21	1448270_at 1448271_a_at	86	6.176	0.1547	Yes
9	SLC7A5	1418326_at	88	6.149	0.1713	Yes
10	SLC29A1	1451782_a_at	95	6.045	0.1875	Yes
11	CTSC	1416382_at 1437939_s_at 1446834_at	117	5.658	0.2018	Yes
12	CTPS	1416563_at	132	5.549	0.2162	Yes
13	RARS	1416312_at	141	5.484	0.2307	Yes
14	TARS	1460323_at	155	5.340	0.2446	Yes
15	NARS	1428666_at 1452866_at	160	5.330	0.2588	Yes
16	ETFA	1423972_at	169	5.280	0.2728	Yes
17	CCT5	1417258_at	223	4.912	0.2837	Yes
18	RTCD1	1424095_at	265	4.729	0.2946	Yes
19	ATF5	1425927_a_at	286	4.608	0.3061	Yes
20	SF3A3	1423811_at	287	4.587	0.3186	Yes
21	CCT6A	1423517_at 1455988_a_at	288	4.587	0.3310	Yes
22	PRDX3	1416292_at	298	4.545	0.3429	Yes
23	TRIP13	1429294_at 1429295_s_at 1446760_at	308	4.503	0.3547	Yes
24	CYCS	1422484_at 1445484_at	311	4.490	0.3668	Yes
25	SRM	1421260_a_at	363	4.298	0.3761	Yes
26	UBE2L3	1417907_at 1417908_s_at 1448879_at 1448880_at	435	4.049	0.3838	Yes
27	MRPL12	1452048_at	495	3.920	0.3917	Yes
28	PSMD5	1423234_at	608	3.626	0.3964	Yes
29	TIMM17A	1426256_at	675	3.477	0.4028	Yes
30	ATP1B3	1423126_at	715	3.404	0.4102	Yes
31	GOT2	1417715_a_at 1417716_at	727	3.373	0.4188	Yes
32	SQLE	1415993_at	730	3.368	0.4279	Yes
33	CCT2	1416037_a_at 1433534_a_at 1433535_x_at	876	3.134	0.4297	Yes
34	MORF4L2	1415778_at 1439413_x_at	914	3.078	0.4363	Yes
35	ID2	1422537_a_at 1435176_a_at 1453596_at	1066	2.929	0.4373	Yes
36	NOL1	1424019_at	1079	2.915	0.4447	Yes
37	RTN4	1421116_a_at 1435284_at 1437224_at 1439650_at 1442760_x_at 1452649_at	1091	2.904	0.4520	Yes
38	EIF3S9	1426674_at	1105	2.895	0.4593	Yes
39	AATF	1432394_a_at 1439676_at 1441722_at 1447459_at	1152	2.828	0.4648	Yes
40	RABGGTB	1419553_a_at	1254	2.729	0.4676	Yes
41	CDK4	1422441_x_at	1289	2.691	0.4733	Yes
42	SCD	1415964_at 1415965_at	1293	2.680	0.4805	Yes
43	GTF2A2	1433528_at	1294	2.679	0.4877	Yes
44	RNU3IP2	1451293_at	1392	2.593	0.4903	Yes
45	AK2	1448450_at 1448451_at	1416	2.576	0.4962	Yes
46	GLO1	1424108_at 1424109_a_at 1436070_at 1451240_a_at	1455	2.532	0.5013	Yes
47	IFI30	1422476_at	1678	2.352	0.4975	Yes
48	ARMET	1428112_at 1459455_at	1695	2.342	0.5031	Yes
49	SSBP1	1427965_at 1430294_at 1444053_at 1452616_s_at 1452617_at	1756	2.294	0.5066	Yes
50	MARS	1455951_at	1786	2.274	0.5114	Yes
51	P2RX5	1449433_at	1904	2.188	0.5119	Yes
52	GM2A	1416188_at 1448241_at	2093	2.081	0.5089	No
53	SLC3A2	1425364_a_at	2461	1.913	0.4973	No
54	PA2G4	1420142_s_at 1423060_at 1435372_a_at 1450854_at 1460265_at	2753	1.806	0.4888	No
55	NDUFS3	1423737_at	2810	1.784	0.4910	No
56	CYC1	1416604_at	2845	1.769	0.4943	No
57	RAB14	1415686_at 1419243_at 1419244_a_at 1419245_at 1419246_s_at 1439687_at 1441992_at	2995	1.722	0.4921	No
58	NXF1	1416791_a_at	3084	1.695	0.4926	No
59	EIF4G2	1415863_at 1452758_s_at	3124	1.684	0.4954	No
60	XPO6	1422759_a_at 1440492_at 1443737_at	3171	1.672	0.4978	No
61	POLR2B	1433552_a_at	3286	1.639	0.4970	No
62	NP	1416530_a_at	3345	1.622	0.4988	No
63	ETF1	1420023_at 1420024_s_at 1424013_at 1440629_at 1451208_at	3509	1.562	0.4955	No
64	RNASEH1	1453833_a_at	3524	1.558	0.4991	No
65	HSPE1	1450668_s_at	3667	1.516	0.4967	No
66	YARS	1460638_at	3864	1.461	0.4916	No
67	ASNS	1433966_x_at 1451095_at	4075	1.400	0.4858	No
68	WNT10B	1426091_a_at	4253	1.351	0.4813	No
69	ACVRL1	1435825_at 1451604_a_at	4286	1.343	0.4835	No
70	AHSA1	1424147_at 1444500_at	4316	1.337	0.4858	No
71	FASN	1423828_at	4338	1.332	0.4884	No
72	PPIF	1416940_at 1438955_x_at	4673	1.242	0.4764	No
73	ADRM1	1419263_a_at 1438170_x_at	4838	1.199	0.4721	No
74	DNAJA1	1416288_at 1437220_x_at 1445729_at 1459835_s_at 1460179_at	4998	1.162	0.4680	No
75	PFKM	1416780_at	5006	1.159	0.4708	No
76	EBP	1416667_at	5032	1.156	0.4728	No
77	S100A4	1424542_at	5046	1.153	0.4753	No
78	JTB	1424283_at	5163	1.131	0.4730	No
79	MYCBP	1421165_at 1427938_at 1427939_s_at 1427940_s_at 1452608_at	5191	1.126	0.4748	No
80	MRPS12	1448799_s_at	5211	1.122	0.4770	No
81	WBSCR22	1423575_a_at	5535	1.057	0.4650	No
82	PHB	1435144_at 1442233_at 1448563_at	5589	1.049	0.4654	No
83	PSMD8	1423296_at	5613	1.045	0.4672	No
84	EIF4G1	1427036_a_at 1427037_at 1438686_at	5912	0.989	0.4562	No
85	HSPA4	1416146_at 1416147_at 1440575_at	5982	0.975	0.4557	No
86	PSMD11	1429370_a_at 1432726_at 1456059_at 1456104_at	5987	0.974	0.4581	No
87	TFRC	1422966_a_at 1422967_a_at 1452661_at AFFX-TransRecMur/X57349_3_at AFFX-TransRecMur/X57349_5_at AFFX-TransRecMur/X57349_M_at	6035	0.966	0.4586	No
88	GORASP2	1424710_a_at 1442825_at 1460460_a_at	6055	0.963	0.4603	No
89	CHUK	1417091_at 1428210_s_at 1451383_a_at	6264	0.932	0.4533	No
90	SYNCRIP	1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at	6583	0.870	0.4410	No
91	COPB2	1452102_at 1456175_a_at	6673	0.854	0.4393	No
92	HCCS	1420889_at 1420890_at	6908	0.815	0.4307	No
93	CAPZA2	1423057_at 1423058_at	6932	0.812	0.4319	No
94	POLR2F	1415754_at 1427402_at	6937	0.810	0.4339	No
95	NMT1	1415683_at 1418082_at 1454941_at	7095	0.780	0.4288	No
96	BYSL	1422767_at 1450742_at	7162	0.770	0.4278	No
97	SDHB	1418005_at	7378	0.735	0.4199	No
98	CSE1L	1448809_at	7580	0.702	0.4126	No
99	BCAP31	1451049_at 1456279_a_at	7662	0.688	0.4107	No
100	PPIB	1437649_x_at 1450911_at	8558	0.543	0.3711	No
101	RPS26	1415876_a_at	9071	0.462	0.3488	No
102	RBBP6	1425114_at 1425115_at 1425421_at 1426487_a_at 1453611_at	9255	0.435	0.3416	No
103	PPP2R2A	1429715_at 1437730_at 1453260_a_at	9860	0.344	0.3148	No
104	UCHL1	1448260_at	9878	0.341	0.3149	No
105	GSPT1	1426736_at 1426737_at 1435000_at 1446550_at 1452168_x_at 1455173_at	10013	0.319	0.3096	No
106	CCNC	1417861_at 1428570_at 1454144_a_at 1454336_at	10461	0.251	0.2897	No
107	ACAT2	1435630_s_at	10519	0.241	0.2878	No
108	BCS1L	1451541_at	10732	0.210	0.2786	No
109	PAPOLA	1424216_a_at 1424217_at 1427544_a_at 1444015_at 1455836_at	10860	0.191	0.2733	No
110	CD47	1419554_at 1428187_at 1430997_at 1449507_a_at 1458634_at 1459908_at	10894	0.187	0.2723	No
111	NUP98	1434220_at 1439154_at 1446397_at 1446988_at	10903	0.186	0.2724	No
112	SAFB	1432911_at 1454415_at 1454928_at 1454929_s_at	11109	0.153	0.2634	No
113	ATP5G3	1454661_at	11186	0.140	0.2603	No
114	EMP3	1417104_at	11401	0.108	0.2507	No
115	PTPN1	1417068_a_at 1438670_at	11489	0.096	0.2470	No
116	WDR18	1433635_at 1443758_at 1454695_at 1460622_x_at	11972	0.019	0.2249	No
117	BTK	1422755_at	12023	0.011	0.2226	No
118	EIF2B4	1449940_a_at	12095	0.001	0.2194	No
119	RAB1A	1416082_at 1448210_at 1457537_at	12115	-0.003	0.2185	No
120	PTDSS1	1416372_at 1441866_s_at 1449739_at	12206	-0.017	0.2144	No
121	BMP1	1426238_at 1427457_a_at 1427458_at 1446007_at	12455	-0.063	0.2032	No
122	PTRF	1421431_at 1424130_a_at 1453891_at	12665	-0.101	0.1939	No
123	GCDH	1448717_at	12825	-0.126	0.1869	No
124	EIF2B2	1434538_x_at 1437428_x_at 1451136_a_at	12966	-0.150	0.1809	No
125	FKBP4	1416362_a_at 1416363_at 1458729_at 1459808_at	13503	-0.241	0.1569	No
126	NME1	1424110_a_at 1435277_x_at	13512	-0.242	0.1572	No
127	MAPKAPK3	1434815_a_at 1437494_at	13543	-0.247	0.1565	No
128	USP10	1448230_at	13589	-0.256	0.1551	No
129	PSMB5	1415676_a_at	14248	-0.371	0.1259	No
130	DDX3X	1416467_at 1423042_at 1423043_s_at	14502	-0.419	0.1154	No
131	TUBG1	1417144_at	14683	-0.455	0.1083	No
132	MLF2	1423916_s_at	14726	-0.464	0.1077	No
133	DAP3	1450848_at	14776	-0.475	0.1067	No
134	EXTL3	1421339_at 1434703_at	15341	-0.591	0.0824	No
135	EBNA1BP2	1428315_at 1437512_x_at 1439898_at 1457668_x_at	15611	-0.652	0.0718	No
136	GCN5L2	1422971_at 1422972_s_at 1426783_at	15867	-0.708	0.0620	No
137	KPNA3	1421828_at 1445527_at 1446538_at 1450385_at 1450386_at	15898	-0.715	0.0626	No
138	PTBP1	1424874_a_at 1450443_at 1458284_at	16044	-0.749	0.0579	No
139	IDH3B	1418885_a_at 1418886_s_at 1441271_at	16867	-0.950	0.0227	No
140	NDUFA9	1416663_at	17078	-0.994	0.0158	No
141	ICT1	1444276_at 1460308_a_at	17122	-1.004	0.0165	No
142	TGDS	1424526_a_at	17264	-1.031	0.0128	No
143	HSPA5	1416064_a_at 1427464_s_at 1447824_x_at	17297	-1.036	0.0142	No
144	MMP15	1422597_at 1437462_x_at 1439734_at	17311	-1.039	0.0164	No
145	HYOU1	1423290_at 1423291_s_at 1451913_a_at	17342	-1.045	0.0178	No
146	ARF1	1420920_a_at 1426390_a_at	17685	-1.136	0.0052	No
147	CHERP	1431770_at 1436885_a_at 1451896_a_at	18099	-1.266	-0.0104	No
148	TIMM44	1417670_at 1439371_x_at 1448801_a_at	18325	-1.341	-0.0171	No
149	LDHB	1416183_a_at 1434499_a_at 1442618_at 1448237_x_at 1455235_x_at	18402	-1.370	-0.0168	No
150	COX11	1429188_at 1457846_at	18459	-1.389	-0.0156	No
151	DHCR24	1418129_at 1451895_a_at	18714	-1.503	-0.0232	No
152	SLC39A14	1425649_at 1427035_at 1438490_at 1457770_at	18962	-1.606	-0.0302	No
153	SLC1A5	1416629_at 1440379_at	19010	-1.625	-0.0280	No
154	EEF1E1	1444757_at 1449044_at	19040	-1.637	-0.0249	No
155	UBE2M	1424345_s_at 1425858_at	19066	-1.647	-0.0216	No
156	PITPNB	1420307_a_at 1421013_at 1434257_s_at 1454892_at	19182	-1.697	-0.0223	No
157	CCT4	1415867_at 1415868_at 1430034_at 1433447_x_at 1438560_x_at 1442569_at 1456082_x_at 1456572_x_at	19424	-1.809	-0.0284	No
158	RAE1	1429528_at 1444256_at 1459822_at	19439	-1.818	-0.0242	No
159	LIMK2	1418581_a_at 1439896_at 1452060_a_at 1458628_at	19445	-1.824	-0.0194	No
160	ALDH4A1	1452375_at	19723	-2.021	-0.0267	No
161	CALU	1415870_at 1441477_at	19801	-2.075	-0.0246	No
162	ATP6V0C	1416392_a_at 1435732_x_at 1438925_x_at	19994	-2.244	-0.0274	No
163	ATP6V0E	1416328_a_at	20020	-2.275	-0.0223	No
164	C1QBP	1448274_at 1455821_x_at	20090	-2.329	-0.0192	No
165	PSMD14	1421751_a_at 1446521_at 1457765_at 1459734_at	20212	-2.424	-0.0182	No
166	PICALM	1441328_at 1443218_at 1446968_at 1451316_a_at 1455773_at	20306	-2.500	-0.0157	No
167	HADH2	1438391_x_at 1448286_at	20667	-2.912	-0.0243	No
168	IDI1	1423804_a_at 1451122_at	20763	-3.049	-0.0205	No
169	PIP5K1A	1421833_at 1421834_at 1450389_s_at	20773	-3.058	-0.0126	No
170	SREBF1	1426690_a_at	20907	-3.287	-0.0098	No
171	GTF3C1	1434066_at 1438425_at 1456024_at 1459673_at	21004	-3.470	-0.0048	No
172	INPP5E	1423229_at 1423230_at	21288	-4.033	-0.0069	No
173	PSMC2	1426611_at 1435859_x_at 1443307_at	21334	-4.136	0.0023	No
174	XBP1	1420011_s_at 1420012_at 1420886_a_at 1437223_s_at	21887	-9.319	0.0022	No