Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_02_ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus_repos |
| Phenotype | phenotype_ATM_minus_versus_BT_ATM_minus.cls#ATM_minus_versus_BT_ATM_minus_repos |
| Upregulated in class | BT_ATM_minus |
| GeneSet | JNK_UP |
| Enrichment Score (ES) | -0.6056425 |
| Normalized Enrichment Score (NES) | -1.8207248 |
| Nominal p-value | 0.001992032 |
| FDR q-value | 0.10515136 |
| FWER p-Value | 0.754 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | XRCC5 | 1451968_at | 56 | 6.947 | 0.0877 | No | ||
| 2 | CYR61 | 1416039_x_at 1417848_at 1417849_at 1438133_a_at 1442340_x_at 1457823_at 1459462_at | 1600 | 2.409 | 0.0486 | No | ||
| 3 | TNC | 1416342_at 1456344_at | 3120 | 1.685 | 0.0011 | No | ||
| 4 | SHOX2 | 1420559_a_at 1438042_at | 3505 | 1.564 | 0.0039 | No | ||
| 5 | IL1RL1 | 1422317_a_at 1425145_at | 3971 | 1.432 | 0.0013 | No | ||
| 6 | DPT | 1418511_at | 4169 | 1.377 | 0.0102 | No | ||
| 7 | CD276 | 1417599_at | 4763 | 1.216 | -0.0010 | No | ||
| 8 | TGFBI | 1415871_at 1437463_x_at 1448123_s_at 1456250_x_at | 5366 | 1.094 | -0.0143 | No | ||
| 9 | HIP1R | 1425551_at 1425552_at 1425553_s_at 1444832_at | 7775 | 0.672 | -0.1155 | No | ||
| 10 | EFNB2 | 1419638_at 1419639_at 1440069_at 1449548_at 1449549_at | 7840 | 0.659 | -0.1099 | No | ||
| 11 | DUSP16 | 1418401_a_at 1440615_at 1440651_at | 8941 | 0.482 | -0.1538 | No | ||
| 12 | ANGPTL2 | 1421002_at 1431848_at | 9002 | 0.474 | -0.1504 | No | ||
| 13 | TCF8 | 1418926_at 1420243_at 1443005_at 1443203_at 1446127_at 1456686_at | 9615 | 0.383 | -0.1733 | No | ||
| 14 | PLEKHO1 | 1417128_at | 11010 | 0.170 | -0.2348 | No | ||
| 15 | LOX | 1416121_at 1437903_at 1448228_at | 13029 | -0.162 | -0.3248 | No | ||
| 16 | CXCL10 | 1418930_at | 13079 | -0.171 | -0.3248 | No | ||
| 17 | MAN2A1 | 1448647_at | 14946 | -0.510 | -0.4034 | No | ||
| 18 | IMPACT | 1415911_at 1446750_at 1446751_s_at | 15103 | -0.544 | -0.4034 | No | ||
| 19 | SGK | 1416041_at | 16074 | -0.755 | -0.4379 | No | ||
| 20 | SOX4 | 1455867_at 1458332_x_at | 17057 | -0.990 | -0.4699 | No | ||
| 21 | JUN | 1417409_at 1448694_at | 18344 | -1.347 | -0.5111 | No | ||
| 22 | RUNX1 | 1422864_at 1422865_at 1427650_a_at 1427847_at 1440878_at 1444527_at 1446930_at 1452530_a_at 1452531_at 1452578_at 1459470_at | 18990 | -1.619 | -0.5195 | No | ||
| 23 | FOXP1 | 1421140_a_at 1421141_a_at 1421142_s_at 1435222_at 1438802_at 1443258_at 1446280_at 1447209_at 1455242_at 1456851_at | 20879 | -3.250 | -0.5634 | Yes | ||
| 24 | TNK2 | 1448298_at | 21388 | -4.289 | -0.5309 | Yes | ||
| 25 | ISGF3G | 1421322_a_at | 21788 | -6.962 | -0.4586 | Yes | ||
| 26 | CCL5 | 1418126_at | 21823 | -7.580 | -0.3617 | Yes | ||
| 27 | IFI27 | 1426278_at | 21847 | -8.294 | -0.2550 | Yes | ||
| 28 | MAP2K7 | 1421416_at 1425393_a_at 1425512_at 1425513_at 1440442_at 1451736_a_at 1457182_at | 21902 | -9.953 | -0.1281 | Yes | ||
| 29 | CCND2 | 1416122_at 1416123_at 1416124_at 1430127_a_at 1434745_at 1448229_s_at 1455956_x_at | 21904 | -9.965 | 0.0014 | Yes |
