Details for gene set HSA00240_PYRIMIDINE

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus_repos
Phenotype	phenotype_ATM_minus_versus_BT_ATM_minus.cls#ATM_minus_versus_BT_ATM_minus_repos
Upregulated in class	ATM_minus
GeneSet	HSA00240_PYRIMIDINE_METABOLISM
Enrichment Score (ES)	0.49389622
Normalized Enrichment Score (NES)	1.9808749
Nominal p-value	0.0
FDR q-value	0.019505257
FWER p-Value	0.112

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	NT5C2	1417201_at 1425933_a_at 1442629_at 1443391_at 1448614_at	38	8.230	0.0531	Yes
2	POLR1A	1417775_at 1446439_at 1447597_at 1447598_x_at 1456066_a_at 1460215_at	107	5.837	0.0889	Yes
3	CTPS	1416563_at	132	5.549	0.1248	Yes
4	POLE3	1421015_s_at	173	5.269	0.1581	Yes
5	TXNRD2	1429971_at 1429972_s_at 1449097_at 1451936_a_at	313	4.485	0.1817	Yes
6	ITPA	1416448_at 1442353_at	343	4.353	0.2093	Yes
7	NME4	1416798_a_at	572	3.730	0.2238	Yes
8	NME7	1418217_at 1438874_at	660	3.505	0.2432	Yes
9	POLR1D	1447320_x_at 1448287_at 1451120_at 1459657_s_at	692	3.445	0.2647	Yes
10	POLR2K	1452596_at	728	3.373	0.2856	Yes
11	DHODH	1417581_at 1417582_s_at	822	3.206	0.3027	Yes
12	POLE	1441854_at 1448650_a_at	990	2.999	0.3151	Yes
13	POLE4	1423371_at 1423372_at 1432286_at 1444739_at	1032	2.964	0.3329	Yes
14	DCTD	1454659_at	1163	2.819	0.3458	Yes
15	POLR2E	1417138_s_at 1451093_at 1458326_at	1231	2.751	0.3611	Yes
16	NME2	1448808_a_at	1415	2.576	0.3699	Yes
17	CMPK	1423073_at 1440308_at	1627	2.389	0.3761	Yes
18	AICDA	1420577_at	1840	2.241	0.3814	Yes
19	NUDT2	1418737_at	1871	2.218	0.3948	Yes
20	UPB1	1460244_at	2094	2.080	0.3985	Yes
21	POLE2	1427094_at 1431440_at	2258	1.996	0.4043	Yes
22	ECGF1	1432181_s_at	2356	1.956	0.4129	Yes
23	TK1	1416258_at	2530	1.884	0.4176	Yes
24	POLR2L	1428296_at	2685	1.829	0.4227	Yes
25	NT5M	1453767_a_at	2725	1.815	0.4331	Yes
26	ENTPD4	1431761_at 1438177_x_at 1447900_x_at 1449190_a_at	2822	1.779	0.4405	Yes
27	NME6	1448574_at	2829	1.775	0.4521	Yes
28	UPP1	1448562_at	2859	1.766	0.4625	Yes
29	POLA2	1425794_at 1448369_at 1456713_at	2897	1.755	0.4725	Yes
30	POLR2B	1433552_a_at	3286	1.639	0.4657	Yes
31	NP	1416530_a_at	3345	1.622	0.4739	Yes
32	POLR2I	1428494_a_at	3373	1.611	0.4834	Yes
33	POLR2A	1422311_a_at 1426242_at 1458710_at	3378	1.608	0.4939	Yes
34	PRIM1	1418369_at 1444544_at 1449061_a_at	3670	1.514	0.4907	No
35	POLR2D	1424258_at	4090	1.398	0.4808	No
36	PNPT1	1444288_at 1452676_a_at	4175	1.375	0.4861	No
37	CAD	1440857_at 1452829_at 1452830_s_at	4380	1.320	0.4856	No
38	UPP2	1460059_at	4416	1.311	0.4927	No
39	AK3	1423717_at 1423718_at 1432436_a_at 1458812_at	5918	0.988	0.4306	No
40	POLR3K	1422752_at 1422753_a_at 1439266_a_at 1440735_at 1450737_at 1456731_x_at	6627	0.862	0.4040	No
41	DTYMK	1438096_a_at 1449116_a_at 1452681_at	6936	0.811	0.3953	No
42	POLR2F	1415754_at 1427402_at	6937	0.810	0.4007	No
43	POLR3G	1449155_at	7276	0.752	0.3902	No
44	DPYD	1427945_at 1427946_s_at 1443717_at	7598	0.700	0.3802	No
45	ENTPD8	1429550_at	8081	0.618	0.3623	No
46	POLD3	1426838_at 1426839_at 1443733_x_at 1459647_at	9110	0.456	0.3183	No
47	POLR2G	1416270_at	9196	0.444	0.3173	No
48	POLR3H	1424227_at 1424228_at	9626	0.382	0.3002	No
49	CTPS2	1435759_at 1442998_at 1448111_at	10031	0.316	0.2839	No
50	POLR3B	1443466_s_at 1443494_at 1452949_at 1457345_at	10765	0.205	0.2517	No
51	ENTPD6	1460433_at	10992	0.173	0.2425	No
52	CANT1	1421476_a_at 1433709_at 1451688_s_at	11404	0.108	0.2244	No
53	POLA1	1419397_at 1456285_at 1459319_at 1459963_at	11482	0.097	0.2215	No
54	POLR2C	1416341_at	11509	0.093	0.2210	No
55	NT5C3	1431306_at 1451050_at	11794	0.046	0.2083	No
56	POLR2H	1424473_at	11875	0.034	0.2048	No
57	POLD1	1448187_at 1456055_x_at	13226	-0.194	0.1444	No
58	NME1	1424110_a_at 1435277_x_at	13512	-0.242	0.1329	No
59	UMPS	1431652_at 1434859_at 1451445_at 1455832_a_at	13626	-0.264	0.1295	No
60	DUT	1419269_at 1419270_a_at	13637	-0.266	0.1308	No
61	POLD2	1448277_at	13894	-0.306	0.1212	No
62	TYMS	1427810_at 1427811_at 1438690_at 1442192_at	14031	-0.331	0.1171	No
63	DPYS	1425688_a_at 1425689_at 1436291_a_at	14044	-0.334	0.1188	No
64	CDA	1427357_at	14458	-0.411	0.1027	No
65	NT5C1B	1427715_a_at	14716	-0.462	0.0940	No
66	ENTPD5	1417382_at 1417383_at 1417384_at 1433763_at 1451765_a_at 1458677_at	14952	-0.511	0.0866	No
67	RFC5	1452917_at	15014	-0.527	0.0873	No
68	ENTPD1	1423326_at 1450939_at 1453586_at	15094	-0.543	0.0873	No
69	NT5E	1416517_at 1422974_at 1427379_at 1428547_at	15666	-0.665	0.0657	No
70	RRM2	1416120_at 1434437_x_at 1448226_at	15830	-0.697	0.0628	No
71	POLR2J	1417720_at 1440065_at	16322	-0.815	0.0458	No
72	NT5C	1417252_at	16517	-0.864	0.0427	No
73	TXNRD1	1421529_a_at 1424486_a_at 1424487_x_at	16680	-0.909	0.0413	No
74	ENTPD3	1434049_at	18045	-1.248	-0.0128	No
75	POLD4	1427885_at	19246	-1.730	-0.0562	No
76	RRM1	1415878_at 1440073_at 1448127_at	19304	-1.758	-0.0470	No
77	POLR3A	1434453_at 1437525_a_at 1444310_at	19469	-1.841	-0.0423	No
78	TK2	1426100_a_at	19570	-1.898	-0.0342	No
79	RRM2B	1433773_at 1437221_at 1437222_x_at 1437476_at	19646	-1.957	-0.0246	No
80	UCK1	1424399_at	20584	-2.808	-0.0487	No
81	DCK	1428838_a_at 1439012_a_at 1449176_a_at	21104	-3.673	-0.0480	No
82	POLR3GL	1451364_at	21328	-4.126	-0.0307	No
83	ZNRD1	1422517_a_at	21343	-4.168	-0.0036	No
84	UCK2	1417137_at 1426909_at 1439740_s_at 1439741_x_at 1441858_at 1448604_at 1457980_x_at	21479	-4.583	0.0208	No