Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_02_ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus_repos |
| Phenotype | phenotype_ATM_minus_versus_BT_ATM_minus.cls#ATM_minus_versus_BT_ATM_minus_repos |
| Upregulated in class | ATM_minus |
| GeneSet | REACTOME_RNA_POLYMERASE_II_TRANSCRIPTION_INITIATION_AND_PROMOTER_CLEARANCE |
| Enrichment Score (ES) | 0.5287783 |
| Normalized Enrichment Score (NES) | 1.7838095 |
| Nominal p-value | 0.0021367522 |
| FDR q-value | 0.059837695 |
| FWER p-Value | 0.676 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | TAF9 | 1422778_at 1451509_at | 119 | 5.623 | 0.0834 | Yes | ||
| 2 | GTF2E2 | 1448884_at | 200 | 5.075 | 0.1600 | Yes | ||
| 3 | GTF2H2 | 1450701_a_at 1457818_at | 546 | 3.794 | 0.2042 | Yes | ||
| 4 | MNAT1 | 1432177_a_at | 556 | 3.770 | 0.2633 | Yes | ||
| 5 | GTF2B | 1438066_at 1451135_at | 726 | 3.374 | 0.3089 | Yes | ||
| 6 | GTF2F1 | 1417698_at 1417699_at | 749 | 3.340 | 0.3607 | Yes | ||
| 7 | TAF12 | 1423398_at | 878 | 3.130 | 0.4043 | Yes | ||
| 8 | POLR2E | 1417138_s_at 1451093_at 1458326_at | 1231 | 2.751 | 0.4317 | Yes | ||
| 9 | GTF2A2 | 1433528_at | 1294 | 2.679 | 0.4712 | Yes | ||
| 10 | TAF5 | 1435474_at | 1936 | 2.167 | 0.4762 | Yes | ||
| 11 | POLR2L | 1428296_at | 2685 | 1.829 | 0.4709 | Yes | ||
| 12 | POLR2B | 1433552_a_at | 3286 | 1.639 | 0.4694 | Yes | ||
| 13 | POLR2I | 1428494_a_at | 3373 | 1.611 | 0.4910 | Yes | ||
| 14 | POLR2A | 1422311_a_at 1426242_at 1458710_at | 3378 | 1.608 | 0.5162 | Yes | ||
| 15 | TAF13 | 1448707_at | 3909 | 1.450 | 0.5149 | Yes | ||
| 16 | POLR2D | 1424258_at | 4090 | 1.398 | 0.5288 | Yes | ||
| 17 | GTF2E1 | 1428124_at 1443110_at | 6072 | 0.960 | 0.4535 | No | ||
| 18 | TAF1 | 1447417_at 1455513_at 1458744_at | 6670 | 0.854 | 0.4397 | No | ||
| 19 | POLR2F | 1415754_at 1427402_at | 6937 | 0.810 | 0.4404 | No | ||
| 20 | ERCC2 | 1460727_at | 7173 | 0.769 | 0.4418 | No | ||
| 21 | POLR2G | 1416270_at | 9196 | 0.444 | 0.3565 | No | ||
| 22 | POLR2C | 1416341_at | 11509 | 0.093 | 0.2524 | No | ||
| 23 | POLR2H | 1424473_at | 11875 | 0.034 | 0.2362 | No | ||
| 24 | ERCC3 | 1448497_at | 12250 | -0.024 | 0.2195 | No | ||
| 25 | TAF11 | 1446161_at 1451995_at | 13025 | -0.160 | 0.1867 | No | ||
| 26 | GTF2F2 | 1426626_at 1443233_at | 14094 | -0.342 | 0.1434 | No | ||
| 27 | GTF2H1 | 1453169_a_at | 14367 | -0.393 | 0.1371 | No | ||
| 28 | GTF2A1 | 1421357_at | 14462 | -0.412 | 0.1394 | No | ||
| 29 | TBP | 1426469_a_at 1426470_at | 15196 | -0.561 | 0.1147 | No | ||
| 30 | POLR2J | 1417720_at 1440065_at | 16322 | -0.815 | 0.0763 | No | ||
| 31 | GTF2H3 | 1454092_a_at | 16414 | -0.840 | 0.0854 | No | ||
| 32 | CCNH | 1418585_at | 17242 | -1.028 | 0.0638 | No | ||
| 33 | CDK7 | 1424257_at 1439511_at 1451741_a_at 1458987_at | 18656 | -1.474 | 0.0226 | No | ||
| 34 | TAF4 | 1427460_at 1452438_s_at | 19515 | -1.863 | 0.0129 | No | ||
| 35 | TAF10 | 1448784_at | 19771 | -2.050 | 0.0336 | No | ||
| 36 | TAF6 | 1418593_at | 21323 | -4.119 | 0.0279 | No |
