Details for gene set REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus_repos
Phenotype	phenotype_ATM_minus_versus_BT_ATM_minus.cls#ATM_minus_versus_BT_ATM_minus_repos
Upregulated in class	ATM_minus
GeneSet	REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA
Enrichment Score (ES)	0.5012293
Normalized Enrichment Score (NES)	1.9993485
Nominal p-value	0.0
FDR q-value	0.010715265
FWER p-Value	0.039

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SF3A1	1419087_s_at 1445719_at 1446687_at 1449333_at	20	8.935	0.0580	Yes
2	SNRPA1	1417351_a_at 1417352_s_at 1417353_x_at	72	6.411	0.0979	Yes
3	NUP43	1432187_at 1432188_s_at	281	4.640	0.1190	Yes
4	SF3A3	1423811_at	287	4.587	0.1490	Yes
5	NUP54	1432539_a_at 1433580_at 1438951_x_at 1447253_x_at 1459651_s_at	341	4.357	0.1754	Yes
6	NCBP2	1423045_at 1423046_s_at 1450847_at	468	3.976	0.1958	Yes
7	CCAR1	1436156_at 1436157_at 1453319_at	484	3.944	0.2211	Yes
8	PHF5A	1424170_at	601	3.640	0.2398	Yes
9	GTF2F1	1417698_at 1417699_at	749	3.340	0.2551	Yes
10	NUP93	1424291_at	816	3.213	0.2733	Yes
11	THOC4	1417724_at 1436211_at	1031	2.964	0.2830	Yes
12	EFTUD2	1416557_a_at 1438835_a_at 1438836_at 1456107_x_at	1095	2.900	0.2993	Yes
13	POLR2E	1417138_s_at 1451093_at 1458326_at	1231	2.751	0.3112	Yes
14	NUP37	1423969_at	1281	2.699	0.3268	Yes
15	NUP107	1426751_s_at	1366	2.614	0.3402	Yes
16	SNRPB2	1426613_a_at 1452422_a_at	1450	2.537	0.3531	Yes
17	NUPL2	1424889_at 1456773_at	1589	2.415	0.3627	Yes
18	MAGOH	1416212_at	1641	2.378	0.3761	Yes
19	CPSF1	1417665_a_at	1787	2.274	0.3844	Yes
20	NUP155	1418727_at 1449200_at	1859	2.229	0.3959	Yes
21	CSTF2	1419644_at 1419645_at 1455523_at	1885	2.207	0.4093	Yes
22	U2AF1	1422509_at	1893	2.197	0.4235	Yes
23	NHP2L1	1416973_at	2200	2.026	0.4228	Yes
24	SFRS6	1416720_at 1416721_s_at 1447898_s_at 1448454_at	2304	1.974	0.4311	Yes
25	SNRPD3	1422884_at 1422885_at 1449629_s_at	2338	1.961	0.4425	Yes
26	NFX1	1419752_at 1419753_at 1428248_at 1442397_at	2509	1.895	0.4473	Yes
27	POLR2L	1428296_at	2685	1.829	0.4513	Yes
28	CSTF1	1417117_at 1448597_at	2709	1.821	0.4623	Yes
29	YBX1	1418624_at 1430720_at 1438064_at	2960	1.732	0.4622	Yes
30	SNRPF	1428672_at	3248	1.649	0.4600	Yes
31	POLR2B	1433552_a_at	3286	1.639	0.4691	Yes
32	POLR2I	1428494_a_at	3373	1.611	0.4758	Yes
33	POLR2A	1422311_a_at 1426242_at 1458710_at	3378	1.608	0.4862	Yes
34	METTL3	1423099_a_at	3424	1.589	0.4946	Yes
35	SFRS3	1416150_a_at 1416151_at 1416152_a_at 1454993_a_at	3506	1.563	0.5012	Yes
36	PCF11	1427159_at 1427160_at 1428724_at 1456489_at	3772	1.489	0.4989	No
37	POLR2D	1424258_at	4090	1.398	0.4936	No
38	SF4	1424381_at 1444699_at	4937	1.177	0.4627	No
39	NUP160	1418530_at 1444892_at	5256	1.113	0.4554	No
40	SFRS7	1424033_at 1424883_s_at 1436871_at	5349	1.096	0.4585	No
41	FUS	1451285_at 1451286_s_at 1455831_at 1458801_at	5946	0.983	0.4377	No
42	SFRS11	1427269_at 1430077_at 1439095_at 1452371_at	6614	0.866	0.4128	No
43	SNRPA	1417274_at	6804	0.831	0.4097	No
44	NUP188	1427047_at 1442314_at	6858	0.824	0.4127	No
45	POLR2F	1415754_at 1427402_at	6937	0.810	0.4144	No
46	CDC40	1442667_at 1445348_at 1453342_at 1457366_at	7979	0.634	0.3710	No
47	SMC1A	1417830_at 1417831_at 1417832_at	8747	0.515	0.3393	No
48	POLR2G	1416270_at	9196	0.444	0.3217	No
49	SF3B2	1429362_a_at 1433461_at 1438637_x_at 1453123_at 1456040_at 1456352_a_at 1459836_x_at	9218	0.440	0.3236	No
50	PRPF6	1424036_at 1426026_at 1454789_x_at	9525	0.397	0.3122	No
51	SF3A2	1450576_a_at 1455546_s_at	9749	0.360	0.3044	No
52	SFRS2	1415807_s_at 1427504_s_at 1427816_at 1452439_s_at	10398	0.260	0.2764	No
53	PAPOLA	1424216_a_at 1424217_at 1427544_a_at 1444015_at 1455836_at	10860	0.191	0.2566	No
54	POLR2C	1416341_at	11509	0.093	0.2276	No
55	POLR2H	1424473_at	11875	0.034	0.2111	No
56	EIF4E	1450909_at 1457489_at 1459371_at	12117	-0.004	0.2001	No
57	RBM5	1438069_a_at 1441319_at 1444618_at 1444971_at 1452186_at 1452187_at 1456262_at	12167	-0.011	0.1979	No
58	SFRS9	1417727_at	12658	-0.100	0.1761	No
59	RBMX	1416177_at 1416354_at 1416355_at 1426863_at 1437847_x_at	13000	-0.156	0.1615	No
60	SRRM1	1420934_a_at 1420935_a_at 1442330_at 1447447_s_at 1450045_at 1454689_at 1459828_at	13024	-0.160	0.1615	No
61	PRPF4	1429724_at 1438481_at	13352	-0.215	0.1480	No
62	PABPN1	1415728_at 1422848_a_at 1422849_a_at 1422850_at	13446	-0.231	0.1453	No
63	GTF2F2	1426626_at 1443233_at	14094	-0.342	0.1179	No
64	RNPS1	1437027_x_at 1437359_at 1437851_x_at 1438267_x_at 1448324_at	14107	-0.344	0.1196	No
65	RANBP2	1422621_at 1440104_at 1445883_at 1450690_at	14574	-0.433	0.1011	No
66	SNRPB	1419260_a_at 1437193_s_at	14684	-0.455	0.0991	No
67	TXNL4A	1419179_at	14892	-0.499	0.0930	No
68	SNRPD2	1452680_at	15599	-0.650	0.0649	No
69	PCBP2	1421743_a_at 1435881_at	15622	-0.656	0.0682	No
70	NUP35	1426447_at	15684	-0.669	0.0699	No
71	NUP214	1434351_at 1456503_at 1457815_at	15760	-0.682	0.0709	No
72	SNRPE	1451294_s_at	15986	-0.733	0.0655	No
73	PTBP1	1424874_a_at 1450443_at 1458284_at	16044	-0.749	0.0678	No
74	SF3B1	1418561_at 1418562_at 1440818_s_at 1449138_at	16276	-0.805	0.0625	No
75	NUDT21	1417681_at 1428339_at 1437213_at 1455966_s_at	16318	-0.814	0.0660	No
76	POLR2J	1417720_at 1440065_at	16322	-0.815	0.0713	No
77	DHX9	1425617_at 1425618_at 1451770_s_at	17119	-1.003	0.0414	No
78	NUP153	1441689_at 1441733_s_at 1452176_at	17323	-1.041	0.0390	No
79	SFRS4	1448778_at	17635	-1.123	0.0322	No
80	CD2BP2	1417223_at 1417224_a_at 1448624_at	17904	-1.204	0.0279	No
81	CSTF3	1424723_s_at 1443909_at	18017	-1.239	0.0309	No
82	PRPF8	1422453_at	18075	-1.259	0.0366	No
83	PCBP1	1448642_at	18400	-1.370	0.0308	No
84	U2AF2	1417260_at	18540	-1.421	0.0338	No
85	RAE1	1429528_at 1444256_at 1459822_at	19439	-1.818	0.0047	No
86	SF3B3	1415985_at 1430075_at	20129	-2.364	-0.0113	No
87	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	20262	-2.456	-0.0011	No
88	NUP62	1415925_a_at 1415926_at 1437612_at 1438917_x_at 1447905_x_at 1448150_at	20412	-2.600	0.0092	No
89	TPR	1426948_at 1426949_s_at 1456112_at 1456651_a_at	20696	-2.952	0.0157	No
90	SLBP	1430058_at 1460168_at	21731	-6.202	0.0093	No