Details for gene set REACTOME_HIV_LIFE

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus_repos
Phenotype	phenotype_ATM_minus_versus_BT_ATM_minus.cls#ATM_minus_versus_BT_ATM_minus_repos
Upregulated in class	ATM_minus
GeneSet	REACTOME_HIV_LIFE_CYCLE
Enrichment Score (ES)	0.46237573
Normalized Enrichment Score (NES)	1.7848026
Nominal p-value	0.0
FDR q-value	0.06565494
FWER p-Value	0.669

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	XRCC5	1451968_at	56	6.947	0.0467	Yes
2	TAF9	1422778_at 1451509_at	119	5.623	0.0837	Yes
3	GTF2E2	1448884_at	200	5.075	0.1160	Yes
4	NUP43	1432187_at 1432188_s_at	281	4.640	0.1453	Yes
5	NUP54	1432539_a_at 1433580_at 1438951_x_at 1447253_x_at 1459651_s_at	341	4.357	0.1735	Yes
6	NCBP2	1423045_at 1423046_s_at 1450847_at	468	3.976	0.1959	Yes
7	GTF2H2	1450701_a_at 1457818_at	546	3.794	0.2193	Yes
8	MNAT1	1432177_a_at	556	3.770	0.2456	Yes
9	RANBP1	1422547_at	561	3.755	0.2720	Yes
10	GTF2B	1438066_at 1451135_at	726	3.374	0.2884	Yes
11	GTF2F1	1417698_at 1417699_at	749	3.340	0.3111	Yes
12	NUP93	1424291_at	816	3.213	0.3309	Yes
13	TAF12	1423398_at	878	3.130	0.3503	Yes
14	POLR2E	1417138_s_at 1451093_at 1458326_at	1231	2.751	0.3537	Yes
15	NUP37	1423969_at	1281	2.699	0.3705	Yes
16	GTF2A2	1433528_at	1294	2.679	0.3890	Yes
17	LIG1	1416641_at	1339	2.636	0.4057	Yes
18	NUP107	1426751_s_at	1366	2.614	0.4230	Yes
19	NUPL2	1424889_at 1456773_at	1589	2.415	0.4300	Yes
20	NUP155	1418727_at 1449200_at	1859	2.229	0.4335	Yes
21	TAF5	1435474_at	1936	2.167	0.4454	Yes
22	POLR2L	1428296_at	2685	1.829	0.4241	Yes
23	SSRP1	1426788_a_at 1426789_s_at 1426790_at	2862	1.766	0.4286	Yes
24	XPO1	1418442_at 1418443_at 1448070_at	3062	1.704	0.4315	Yes
25	POLR2B	1433552_a_at	3286	1.639	0.4330	Yes
26	POLR2I	1428494_a_at	3373	1.611	0.4404	Yes
27	POLR2A	1422311_a_at 1426242_at 1458710_at	3378	1.608	0.4517	Yes
28	XRCC6	1417437_at 1428504_at 1442250_at	3393	1.602	0.4624	Yes
29	TAF13	1448707_at	3909	1.450	0.4491	No
30	POLR2D	1424258_at	4090	1.398	0.4508	No
31	NUP160	1418530_at 1444892_at	5256	1.113	0.4054	No
32	RAN	1443131_at 1446819_at 1447478_at 1460551_at	5840	1.003	0.3858	No
33	GTF2E1	1428124_at 1443110_at	6072	0.960	0.3820	No
34	TAF1	1447417_at 1455513_at 1458744_at	6670	0.854	0.3608	No
35	NUP188	1427047_at 1442314_at	6858	0.824	0.3581	No
36	POLR2F	1415754_at 1427402_at	6937	0.810	0.3602	No
37	ERCC2	1460727_at	7173	0.769	0.3549	No
38	ELL	1441928_x_at 1460643_at	7347	0.739	0.3523	No
39	RNMT	1436328_at 1440002_at 1446442_at 1453106_a_at	8444	0.563	0.3061	No
40	POLR2G	1416270_at	9196	0.444	0.2749	No
41	POLR2C	1416341_at	11509	0.093	0.1698	No
42	POLR2H	1424473_at	11875	0.034	0.1533	No
43	ERCC3	1448497_at	12250	-0.024	0.1364	No
44	RDBP	1450705_at	12271	-0.028	0.1357	No
45	TAF11	1446161_at 1451995_at	13025	-0.160	0.1024	No
46	CCNT1	1419313_at 1456477_at	13808	-0.294	0.0687	No
47	GTF2F2	1426626_at 1443233_at	14094	-0.342	0.0580	No
48	GTF2H1	1453169_a_at	14367	-0.393	0.0484	No
49	GTF2A1	1421357_at	14462	-0.412	0.0470	No
50	RANBP2	1422621_at 1440104_at 1445883_at 1450690_at	14574	-0.433	0.0450	No
51	TCEB1	1427914_a_at 1427915_s_at 1436226_at 1452593_a_at	15132	-0.549	0.0234	No
52	TBP	1426469_a_at 1426470_at	15196	-0.561	0.0245	No
53	TH1L	1416198_at	15387	-0.599	0.0201	No
54	XRCC4	1424601_at 1424602_s_at 1445922_at	15417	-0.605	0.0230	No
55	RANGAP1	1423749_s_at 1444581_at 1451092_a_at	15626	-0.656	0.0182	No
56	NUP35	1426447_at	15684	-0.669	0.0203	No
57	BANF1	1421081_a_at 1421082_s_at 1421083_x_at	15736	-0.678	0.0228	No
58	NUP214	1434351_at 1456503_at 1457815_at	15760	-0.682	0.0265	No
59	POLR2J	1417720_at 1440065_at	16322	-0.815	0.0067	No
60	GTF2H3	1454092_a_at	16414	-0.840	0.0084	No
61	FEN1	1421731_a_at 1436454_x_at	16603	-0.886	0.0061	No
62	PPIA	1417451_a_at	16931	-0.963	-0.0020	No
63	LIG4	1439487_at	17200	-1.019	-0.0070	No
64	CCNH	1418585_at	17242	-1.028	-0.0016	No
65	NUP153	1441689_at 1441733_s_at 1452176_at	17323	-1.041	0.0021	No
66	CDK7	1424257_at 1439511_at 1451741_a_at 1458987_at	18656	-1.474	-0.0484	No
67	TCEB2	1428263_a_at	18895	-1.579	-0.0481	No
68	RAE1	1429528_at 1444256_at 1459822_at	19439	-1.818	-0.0600	No
69	TCEB3	1422591_at 1434117_at 1450676_at	19495	-1.853	-0.0494	No
70	TAF4	1427460_at 1452438_s_at	19515	-1.863	-0.0371	No
71	CDK9	1417269_at 1457240_at	19725	-2.022	-0.0323	No
72	TAF10	1448784_at	19771	-2.050	-0.0198	No
73	RNGTT	1425844_a_at 1448714_at	20350	-2.542	-0.0283	No
74	NUP62	1415925_a_at 1415926_at 1437612_at 1438917_x_at 1447905_x_at 1448150_at	20412	-2.600	-0.0126	No
75	TPR	1426948_at 1426949_s_at 1456112_at 1456651_a_at	20696	-2.952	-0.0046	No
76	TAF6	1418593_at	21323	-4.119	-0.0041	No
77	CD4	1419696_at 1427779_a_at	21452	-4.512	0.0221	No