Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos |
| Phenotype | phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos |
| Upregulated in class | ATM_plus |
| GeneSet | REGULATION_OF_GROWTH |
| Enrichment Score (ES) | -0.5219922 |
| Normalized Enrichment Score (NES) | -1.7174277 |
| Nominal p-value | 0.0048076925 |
| FDR q-value | 0.2888126 |
| FWER p-Value | 0.97 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | CDKN1A | 1421679_a_at 1424638_at | 774 | 3.430 | -0.0002 | No | ||
| 2 | TGFB1 | 1420653_at 1445360_at | 856 | 3.267 | 0.0296 | No | ||
| 3 | CDKN2A | 1450140_a_at | 1423 | 2.597 | 0.0304 | No | ||
| 4 | NDUFS3 | 1423737_at | 2167 | 2.064 | 0.0176 | No | ||
| 5 | TGFB2 | 1423250_a_at 1438303_at 1446141_at 1450922_a_at 1450923_at | 3049 | 1.699 | -0.0052 | No | ||
| 6 | SPHK1 | 1451596_a_at | 4526 | 1.295 | -0.0594 | No | ||
| 7 | ENO1 | 1419023_x_at | 5302 | 1.142 | -0.0831 | No | ||
| 8 | TSPYL2 | 1434849_at | 6007 | 1.025 | -0.1048 | No | ||
| 9 | APBB1 | 1423892_at 1423893_x_at | 6350 | 0.974 | -0.1104 | No | ||
| 10 | SOD1 | 1435304_at 1440222_at 1440896_at 1451124_at 1459976_s_at | 6699 | 0.919 | -0.1169 | No | ||
| 11 | APBB2 | 1426719_at 1426720_at 1440135_at 1446481_at 1452342_at | 6929 | 0.888 | -0.1182 | No | ||
| 12 | TP53 | 1426538_a_at 1427739_a_at 1438808_at 1457623_x_at 1459780_at 1459781_x_at | 7499 | 0.796 | -0.1361 | No | ||
| 13 | GHRH | 1419634_a_at | 7572 | 0.784 | -0.1313 | No | ||
| 14 | BMP10 | 1421763_at | 8132 | 0.704 | -0.1496 | No | ||
| 15 | COL4A4 | 1425772_at 1440250_at 1445328_at | 8981 | 0.579 | -0.1824 | No | ||
| 16 | CDKN2C | 1416868_at 1439164_at | 9503 | 0.503 | -0.2011 | No | ||
| 17 | CDA | 1427357_at | 9701 | 0.477 | -0.2052 | No | ||
| 18 | PPP1R9B | 1447247_at 1447486_at | 10311 | 0.396 | -0.2290 | No | ||
| 19 | GHSR | 1446756_at | 10508 | 0.366 | -0.2342 | No | ||
| 20 | SMAD3 | 1450471_at 1450472_s_at 1454960_at | 10548 | 0.360 | -0.2323 | No | ||
| 21 | CDC2L1 | 1418841_s_at | 10791 | 0.327 | -0.2400 | No | ||
| 22 | PPT1 | 1420015_s_at 1420016_at 1422467_at 1422468_at 1444884_at | 11039 | 0.295 | -0.2482 | No | ||
| 23 | ALOX12 | 1422699_at 1422700_at | 11342 | 0.248 | -0.2595 | No | ||
| 24 | NOL8 | 1428950_s_at 1428951_at 1452974_at | 11360 | 0.246 | -0.2577 | No | ||
| 25 | PLCE1 | 1452398_at | 11872 | 0.170 | -0.2793 | No | ||
| 26 | RERG | 1447446_at 1451236_at | 12879 | 0.021 | -0.3251 | No | ||
| 27 | BNIPL | 1420683_at | 13200 | -0.036 | -0.3394 | No | ||
| 28 | FAM107A | 1442951_at 1445064_at | 14261 | -0.225 | -0.3855 | No | ||
| 29 | DLC1 | 1436173_at 1450206_at 1458220_at 1460602_at | 14319 | -0.238 | -0.3856 | No | ||
| 30 | RB1 | 1417850_at 1441494_at 1444400_at 1444454_at 1457447_at | 15532 | -0.490 | -0.4360 | No | ||
| 31 | ING4 | 1448054_at 1460728_s_at | 15551 | -0.496 | -0.4317 | No | ||
| 32 | BCAR1 | 1439388_s_at 1450622_at | 16323 | -0.693 | -0.4599 | No | ||
| 33 | PTCH1 | 1428853_at 1439663_at 1447039_at 1450824_at | 17546 | -1.084 | -0.5046 | No | ||
| 34 | DCBLD2 | 1420526_at 1437635_at 1449891_a_at | 17589 | -1.100 | -0.4952 | No | ||
| 35 | PRSS2 | 1417682_a_at 1433459_x_at 1433573_x_at 1435507_x_at | 18176 | -1.354 | -0.5081 | Yes | ||
| 36 | INHBA | 1422053_at 1458291_at | 18304 | -1.420 | -0.4993 | Yes | ||
| 37 | PML | 1448757_at 1456103_at 1459137_at | 18354 | -1.441 | -0.4868 | Yes | ||
| 38 | ING5 | 1431134_at 1436069_at 1442094_at 1454235_a_at | 18788 | -1.664 | -0.4895 | Yes | ||
| 39 | DERL2 | 1435101_at 1448438_at | 19427 | -2.090 | -0.4973 | Yes | ||
| 40 | IHPK2 | 1428373_at 1435319_at | 19506 | -2.133 | -0.4789 | Yes | ||
| 41 | SERTAD2 | 1417209_at 1444645_at 1454815_at | 19753 | -2.334 | -0.4663 | Yes | ||
| 42 | SMAD4 | 1422485_at 1422486_a_at 1422487_at 1444205_at | 20022 | -2.598 | -0.4519 | Yes | ||
| 43 | NDUFA13 | 1430713_s_at | 20037 | -2.613 | -0.4257 | Yes | ||
| 44 | CDKN1B | 1419497_at 1434045_at | 21001 | -3.924 | -0.4295 | Yes | ||
| 45 | SERTAD3 | 1421076_at 1421077_at | 21241 | -4.504 | -0.3942 | Yes | ||
| 46 | BBC3 | 1423315_at | 21263 | -4.564 | -0.3483 | Yes | ||
| 47 | ACVR1B | 1422098_at 1433725_at | 21652 | -6.207 | -0.3024 | Yes | ||
| 48 | KLK8 | 1419722_at | 21860 | -9.470 | -0.2148 | Yes | ||
| 49 | CDKN2D | 1416253_at | 21862 | -9.545 | -0.1169 | Yes | ||
| 50 | BCL6 | 1421818_at 1450381_a_at | 21907 | -11.718 | 0.0012 | Yes |
