DatasetSet_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls
#ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls
#ATM_minus_versus_ATM_plus_repos
Phenotypephenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in classATM_plus
GeneSetPROTEIN_KINASE_CASCADE
Enrichment Score (ES)-0.4179915
Normalized Enrichment Score (NES)-1.7045548
Nominal p-value0.0
FDR q-value0.23977835
FWER p-Value0.986
Table: GSEA Results Summary



Fig 1: Enrichment plot: PROTEIN_KINASE_CASCADE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CRKL1421953_at 1421954_at 1425604_at 1436950_at3244.648-0.0055No
2BLK1422775_at4944.032-0.0051No
3DUSP91433844_a_at 1433845_x_at 1454737_at5563.843-0.0001No
4EEF1D1428135_a_at 1439439_x_at 1449506_a_at 1459754_x_at6383.6820.0036No
5F21418897_at6593.6370.0101No
6ECM11448613_at7093.5420.0150No
7TFG1415887_at 1438053_at7323.4970.0211No
8HMOX11448239_at7553.4560.0271No
9GSG21450886_at8543.2740.0292No
10BST21424921_at8673.2560.0353No
11ADORA2B1434430_s_at 1434431_x_at 1434772_at 1450214_at9083.1820.0399No
12NMI1425719_a_at9453.1200.0446No
13MARK21415952_at 1415953_s_at 1435889_at 1444303_at10792.9690.0445No
14CCL21420380_at11402.8870.0476No
15ECT21419513_a_at11512.8790.0529No
16ITGB1BP11422157_a_at 1445697_at11632.8650.0583No
17CHUK1417091_at 1428210_s_at 1451383_a_at12142.8040.0616No
18PLK21427005_at12482.7680.0657No
19MAPK101437195_x_at 1448342_at 1458002_at 1458062_at 1458513_at13092.7150.0685No
20TNFRSF10B1421296_at 1422344_s_at13472.6850.0722No
21MAP3K61449901_a_at14372.5790.0734No
22ADAM91416094_at14402.5780.0785No
23GOLT1B1449859_at 1460583_at14622.5560.0827No
24GPR89A1424696_at14842.5370.0869No
25LGALS91421217_a_at15172.5060.0905No
26ADRA2A1423022_at 1433600_at 1433601_at21162.0970.0672No
27MAP3K91432981_at 1442218_at 1455684_at 1458922_at21372.0770.0705No
28MAP3K71419988_at 1425795_a_at 1426627_at 1449693_at 1455441_at 1458787_at21652.0660.0734No
29LTBR1416435_at24011.9510.0666No
30SCG21450708_at26091.8590.0608No
31RPS6KA51431050_at 1437625_at 1439004_at 1440343_at26211.8540.0640No
32TPD52L11418412_at27331.8120.0626No
33C5AR11422190_at 1439902_at27451.8070.0658No
34ATP6AP21423662_at 1437688_x_at 1439456_x_at28191.7780.0660No
35CCR21421186_at 1421187_at 1421188_at 1460067_at34561.5760.0399No
36MAP3K121417115_at 1438908_at 1456565_s_at34621.5740.0428No
37ADRB31421555_at 1455918_at35301.5530.0429No
38EDG51428176_at 1447880_x_at35621.5400.0446No
39CASP81424552_at37091.5000.0409No
40RPS6KA21417542_at 1417543_at 1441311_at38181.4710.0389No
41TDGF11450989_at38351.4640.0411No
42DUSP81418714_at40041.4200.0363No
43VAPA1416465_a_at 1416466_at 1448349_at41171.3890.0339No
44MAPKAPK21426648_at41751.3780.0341No
45MAP3K7IP11426898_at 1447692_x_at44111.3230.0259No
46WNK41427196_at 1444133_at45011.3000.0245No
47LGALS11419573_a_at 1455439_a_at46431.2670.0205No
48SRPK11454042_a_at 1455107_at49311.2130.0098No
49NF11438067_at 1441523_at 1443097_at 1452525_a_at51141.1800.0038No
50NEK61451043_at51371.1760.0051No
51FAF11418242_at 1434370_s_at55011.107-0.0094No
52CD241416034_at 1437502_x_at 1448182_a_at56141.087-0.0123No
53STAMBP1416317_a_at 1431962_a_at56311.084-0.0109No
54MAPK131448871_at59591.032-0.0238No
55SGK21418739_at61591.002-0.0310No
56FPR11450808_at62640.988-0.0338No
57NDFIP11424820_a_at 1424821_at 1451493_at63140.979-0.0341No
58MBIP1424405_at63380.975-0.0331No
59PPP5C1424115_at 1424116_x_at 1451242_a_at63400.975-0.0312No
60TRAF3IP21445985_at 1448508_at64590.958-0.0347No
61TRIM131417888_at65070.952-0.0349No
62SHC11422853_at 1422854_at65670.943-0.0357No
63SOD11435304_at 1440222_at 1440896_at 1451124_at 1459976_s_at66990.919-0.0399No
64MAPK8IP31416437_a_at 1425975_a_at 1436676_at 1460628_at67160.917-0.0388No
65WNK31443924_at67390.914-0.0380No
66RPL171423855_x_at 1435791_x_at 1453752_at67520.913-0.0367No
67RHOC1435394_s_at 1448605_at67630.911-0.0353No
68IFNAR21427691_a_at 1440169_x_at 1451462_a_at68950.892-0.0395No
69IL12A1425454_a_at69050.891-0.0381No
70GNG31417428_at70580.865-0.0434No
71MARK11419834_x_at 1425509_at 1425510_at 1425511_at 1449630_s_at72700.830-0.0514No
72STK38L1435877_at 1435878_at 1455183_at73810.814-0.0548No
73PRDX41416166_a_at 1416167_at 1431269_at74530.803-0.0565No
74UBE2N1422559_at 1435384_at76990.767-0.0662No
75FGF21449826_a_at77480.762-0.0669No
76PLEKHG51452248_at77720.758-0.0664No
77AKAP111434764_at78470.747-0.0683No
78MAP3K131430137_at 1440749_at 1447699_at78580.745-0.0673No
79PROK21419681_a_at 1426176_a_at 1451952_at80280.722-0.0736No
80STK31418512_at 1418513_at 1446289_at 1446627_at 1449114_at80970.712-0.0753No
81TLR61421352_at83260.674-0.0844No
82LITAF1416303_at 1416304_at83720.667-0.0851No
83FGFR31421841_at 1425796_a_at84560.656-0.0876No
84CASP11449265_at86390.628-0.0948No
85NRTN1449281_at86640.624-0.0946No
86DAPK21451453_at86740.622-0.0938No
87GRM41457299_at87520.612-0.0961No
88TSPAN61416872_at 1448501_at87950.605-0.0968No
89IRAK11448668_a_at 1460649_at88370.599-0.0975No
90TMED41448422_at 1448423_at88440.598-0.0965No
91IL201421608_at88650.595-0.0962No
92CHRNA71440681_at 1450299_at89210.588-0.0976No
93AMBP1416649_at91900.548-0.1088No
94SNF1LK1419766_at 1459601_at96920.478-0.1310No
95ICK1448310_at 1454243_at 1455687_at97370.471-0.1320No
96GJA11415800_at 1415801_at 1437992_x_at 1438650_x_at 1438945_x_at 1438973_x_at100120.433-0.1438No
97GADD45G1453851_a_at100510.428-0.1447No
98ZDHHC171434397_at 1447656_at 1455986_at 1458084_at 1458363_at100850.425-0.1453No
99DUSP101417163_at 1417164_at100910.424-0.1447No
100MAPK8IP21418785_at 1418786_at 1435045_s_at 1449225_a_at 1455194_at101780.414-0.1478No
101SECTM11419478_at 1419479_at101950.411-0.1477No
102TNFSF101420412_at 1439680_at 1459913_at102420.404-0.1490No
103WNK11433676_at 1436746_at 1437888_at 1439970_at102730.401-0.1496No
104EGF1418093_a_at102990.397-0.1500No
105EDA2R1440085_at106410.345-0.1650No
106PPM1A1415678_at 1417221_at 1425537_at 1429500_at 1429501_s_at 1443903_at 1451943_a_at 1453171_s_at110080.299-0.1813No
107RIPK21421236_at 1450173_at110960.286-0.1847No
108TGFA1421942_s_at 1450421_at111310.282-0.1857No
109ERC11421501_a_at 1424247_at 1441493_at 1444356_at 1451279_at112230.267-0.1894No
110NEK111441525_at 1445012_at113170.251-0.1931No
111EDG21417143_at 1426110_a_at 1448606_at113950.241-0.1962No
112IRAK1BP11422683_at 1431771_a_at116130.211-0.2058No
113MAST11432255_at 1449423_at116910.198-0.2089No
114CAMKK21424474_a_at 1424475_at 1424476_at 1455401_at117440.190-0.2109No
115CARD101449491_at117960.182-0.2129No
116PLCE11452398_at118720.170-0.2160No
117NF21421820_a_at 1427708_a_at 1450382_at 1451829_a_at119050.165-0.2172No
118MAP4K51427083_a_at 1427084_a_at 1427376_a_at 1440059_at 1445426_at 1446348_at 1447204_at120160.149-0.2220No
119CANT11421476_a_at 1433709_at 1451688_s_at123260.102-0.2360No
120GHRL1448980_at123700.096-0.2378No
121MYD881419272_at124790.079-0.2426No
122LATS21419678_at 1419679_at 1425420_s_at 1426156_at 1437101_at 1439441_x_at124950.077-0.2432No
123MAP4K31444406_at127840.035-0.2564No
124FGFR11424050_s_at 1425911_a_at 1436551_at13066-0.014-0.2693No
125WNK21453355_at 1455424_at13088-0.018-0.2702No
126DUSP41428834_at13169-0.032-0.2739No
127OTUD7B1428953_at 1429139_at 1435552_at 1457716_at13246-0.045-0.2773No
128ADRA1A1421659_at 1459351_at13489-0.085-0.2883No
129MAPK141416703_at 1416704_at 1426104_at 1442364_at 1451927_a_at 1459617_at13846-0.151-0.3044No
130DUSP161418401_a_at 1440615_at 1440651_at14186-0.210-0.3196No
131MAP3K101436373_at 1440500_at 1457456_at 1458651_at14314-0.237-0.3250No
132FASLG1418803_a_at 1449235_at14646-0.298-0.3396No
133ADRA1B1422183_a_at14707-0.309-0.3418No
134BCL101418970_a_at 1418971_x_at 1418972_at 1443524_x_at14734-0.314-0.3423No
135TNFAIP31433699_at 1450829_at14751-0.319-0.3424No
136MAP3K21422250_at14835-0.336-0.3456No
137FYN1417558_at 1441647_at 1448765_at15050-0.377-0.3547No
138MDFI1420713_a_at 1425924_at15121-0.390-0.3571No
139ADRA2C1422335_at 1435296_at 1439762_x_at 1457328_at15179-0.401-0.3589No
140ZDHHC131428307_at 1460048_at15347-0.440-0.3658No
141HTR2B1422125_at15468-0.472-0.3703No
142TNIK1443802_at15786-0.551-0.3838No
143DUSP221441723_at 1448985_at15933-0.584-0.3894No
144TRAF61421376_at 1421377_at 1435350_at 1443288_at 1446940_at 1446977_at15940-0.585-0.3885No
145DAPK11426915_at 1427358_a_at 1445032_at16042-0.611-0.3919No
146MIB21424862_s_at16209-0.661-0.3982No
147HGS1416540_at16214-0.662-0.3970No
148MAPK91421876_at 1421877_at 1421878_at16335-0.696-0.4012No
149REL1420710_at16407-0.716-0.4030No
150SNF1LK21444472_at 1457276_at16531-0.754-0.4071No
151GPS21417796_at16538-0.755-0.4059No
152MAPK81420931_at 1420932_at 1437045_at 1440856_at 1457936_at16570-0.764-0.4058No
153PKN11458674_at 1459231_at16602-0.775-0.4056No
154PTEN1422553_at 1441593_at 1444325_at 1450655_at 1454722_at 1455728_at 1457493_at16734-0.818-0.4100No
155TRADD1429117_at 1439910_a_at 1452622_a_at16801-0.841-0.4113No
156RHOA1437628_s_at16868-0.859-0.4126No
157SLC44A21428065_at 1438559_x_at 1438860_a_at16934-0.882-0.4138No
158SRC1423240_at 1450918_s_at16997-0.899-0.4149No
159CD401439221_s_at 1449473_s_at 1460415_a_at16998-0.899-0.4130No
160RIPK11419508_at 1439273_at 1449485_at17018-0.908-0.4121No
161PIAS11422581_at 1446448_at 1455486_at 1455611_at17082-0.930-0.4131No
162MAPK8IP11425679_a_at 1440619_at17141-0.947-0.4139No
163STK41421107_at 1434159_at 1436015_s_at17209-0.970-0.4150No
164TEC1441524_at 1460204_at17225-0.975-0.4137No
165CXXC51431469_a_at 1448960_at17274-0.990-0.4139No
166FKBP1A1416036_at 1438795_x_at 1438958_x_at 1448184_at 1456196_x_at17302-1.000-0.4131No
167RGS31425701_a_at 1427648_at 1449516_a_at 1454026_a_at17409-1.033-0.4159Yes
168MALT11445068_at 1456126_at 1456429_at17437-1.041-0.4150Yes
169CLCF11437270_a_at 1437271_at 1450262_at17457-1.046-0.4138Yes
170EDARADD1421213_at 1433132_at 1433133_at 1437800_at17493-1.061-0.4132Yes
171DAPK31423446_at 1456496_at17556-1.088-0.4139Yes
172SPRED11423160_at 1423161_s_at 1423162_s_at 1428777_at 1441517_at 1442859_at 1443652_x_at 1445228_at 1452911_at 1460116_s_at17626-1.116-0.4148Yes
173PIK3CB1445731_at 1453069_at17659-1.128-0.4140Yes
174SOCS31416576_at 1455899_x_at 1456212_x_at17683-1.146-0.4127Yes
175CARTPT1422825_at17694-1.151-0.4108Yes
176HIPK21424863_a_at 1424864_at 1425983_x_at 1428433_at 1429566_a_at 1432523_at 1446167_at 1448631_a_at 1456022_at 1458520_at17726-1.165-0.4099Yes
177GPS11415699_a_at17730-1.168-0.4077Yes
178DAXX1419026_at17755-1.177-0.4064Yes
179IL31RA1445095_at 1451535_at17860-1.218-0.4087Yes
180SRPK21417134_at 1417135_at 1417136_s_at 1431372_at 1435746_at 1440080_at 1442241_at 1442980_at 1447755_at 1448603_at18037-1.291-0.4142Yes
181PAK11420979_at 1420980_at 1450070_s_at 1459029_at18052-1.297-0.4122Yes
182PTPLAD11433706_a_at 1452427_s_at 1454698_at18065-1.301-0.4101Yes
183FYB1452117_a_at18093-1.312-0.4087Yes
184SPRED21423001_at 1434403_at 1436892_at 1441415_at 1441802_at18132-1.328-0.4078Yes
185SLC35B21423927_at 1429007_at18155-1.342-0.4061Yes
186MKNK11417630_at 1417631_at 1454119_at18221-1.375-0.4063Yes
187NUP621415925_a_at 1415926_at 1437612_at 1438917_x_at 1447905_x_at 1448150_at18238-1.380-0.4042Yes
188CD811416330_at18423-1.474-0.4097Yes
189GPR1771423824_at 1423825_at 1437434_a_at 1458319_at18461-1.494-0.4084Yes
190SQSTM11440076_at 1442237_at 1444021_at 1450957_a_at18467-1.501-0.4056Yes
191TBK11422469_at 1445571_at 1460315_s_at18480-1.506-0.4031Yes
192SOCS61435492_at 1450129_a_at 1452764_at 1459350_at18648-1.572-0.4076Yes
193NLK1419112_at 1435970_at 1443279_at 1445427_at 1456467_s_at18764-1.649-0.4095Yes
194MAPK111421925_at 1421926_at18775-1.658-0.4066Yes
195FADD1416888_at 1446499_at18889-1.709-0.4084Yes
196RGS41416286_at 1416287_at 1448285_at18993-1.792-0.4095Yes
197TRAF71424320_a_at19018-1.809-0.4069Yes
198SCOTIN1423986_a_at 1437503_a_at19048-1.827-0.4045Yes
199MAP3K7IP21423462_at 1451003_at19161-1.912-0.4058Yes
200STAT41448713_at19172-1.918-0.4024Yes
201TNFSF141421588_at 1450298_at19349-2.041-0.4064Yes
202F2R1437308_s_at 1450852_s_at19369-2.053-0.4031Yes
203SLC20A11438824_at 1446441_at 1448568_a_at19371-2.055-0.3989Yes
204MAP3K41421450_a_at 1447667_x_at 1450253_a_at 1459800_s_at19373-2.056-0.3948Yes
205MDFIC1427040_at19694-2.276-0.4049Yes
206STAT5A1421469_a_at 1450259_a_at19715-2.299-0.4012Yes
207NDFIP21452066_a_at19747-2.324-0.3979Yes
208RPS6KA41438243_at 1448498_at19778-2.357-0.3945Yes
209FGF131418497_at 1418498_at19892-2.472-0.3947Yes
210OXSR11426933_at19897-2.477-0.3899Yes
211STK17B1423452_at 1430165_at 1450997_at20011-2.589-0.3898Yes
212TMEM1011451315_at20085-2.680-0.3877Yes
213MKNK21418300_a_at 1449029_at20156-2.755-0.3854Yes
214ADRB21437302_at20194-2.793-0.3814Yes
215SOCS21418507_s_at 1438470_at 1441476_at 1442586_at 1446085_at 1449109_at20296-2.903-0.3802Yes
216RHOH1429319_at 1441385_at 1443015_at20337-2.963-0.3760Yes
217TICAM11454676_s_at20340-2.969-0.3701Yes
218TMEM9B1417874_at 1448867_at20413-3.047-0.3672Yes
219MAP2K41426233_at 1442679_at 1451982_at20425-3.061-0.3615Yes
220DBNL1460334_at20444-3.079-0.3561Yes
221IRAK21436507_at20476-3.121-0.3512Yes
222IKBKG1421208_at 1421209_s_at 1435646_at 1435647_at 1450161_at 1454690_at20492-3.141-0.3455Yes
223ATP2C11431196_at 1434386_at 1437738_at 1439215_at 1442742_at20532-3.201-0.3408Yes
224TRIP61449041_a_at20609-3.320-0.3375Yes
225TAOK21438208_at 1443642_at 1456826_at20627-3.342-0.3315Yes
226BCL31418133_at20646-3.380-0.3255Yes
227TAOK31435964_a_at 1444366_at 1444881_at 1447257_at 1455733_at20650-3.383-0.3188Yes
228CXCR41448710_at20678-3.415-0.3131Yes
229STAT31424272_at 1426587_a_at 1459961_a_at 1460700_at20682-3.421-0.3063Yes
230BIRC21418854_at20809-3.626-0.3047Yes
231MAP3K111450669_at20827-3.653-0.2981Yes
232MAP4K21428297_at 1434833_at 1450244_a_at20871-3.716-0.2925Yes
233STAT11420915_at 1440481_at 1450033_a_at 1450034_at20879-3.726-0.2853Yes
234RELA1419536_a_at20962-3.850-0.2812Yes
235MAP2K71421416_at 1425393_a_at 1425512_at 1425513_at 1440442_at 1451736_a_at 1457182_at20978-3.880-0.2741Yes
236PINK11441937_s_at 1451148_at21016-3.944-0.2678Yes
237HCLS11418842_at21024-3.955-0.2600Yes
238MINK11449362_a_at21052-4.013-0.2531Yes
239TRAF21451233_at21088-4.116-0.2464Yes
240GADD45B1420197_at 1449773_s_at 1450971_at21323-4.709-0.2476Yes
241STAT5B1422102_a_at 1422103_a_at21397-4.949-0.2410Yes
242MAP3K31426686_s_at 1426687_at 1436522_at21412-5.003-0.2314Yes
243STK381416252_at 1431303_at 1439938_at21422-5.041-0.2216Yes
244SOCS11440047_at 1450446_a_at21486-5.335-0.2137Yes
245DUSP61415834_at21510-5.447-0.2037Yes
246SH2D3C1415886_at21530-5.528-0.1933Yes
247MAP4K41422615_at 1440609_at 1448050_s_at 1459912_at21585-5.843-0.1840Yes
248FLNA1426677_at21604-5.948-0.1727Yes
249MADD1425735_at 1455502_at21632-6.088-0.1616Yes
250LAX11438687_at21659-6.247-0.1501Yes
251STAT21421911_at 1450403_at21693-6.619-0.1382Yes
252IKBKE1417813_at21703-6.755-0.1249Yes
253DUSP21450698_at21723-6.910-0.1117Yes
254CC2D1A1426422_at21735-7.102-0.0978Yes
255CFLAR1424996_at 1425686_at 1425687_at 1439600_at 1449317_at21824-8.576-0.0845Yes
256TNFRSF1A1417291_at21853-9.228-0.0670Yes
257CCM21434648_a_at 1434649_at 1456290_x_at 1457339_at21896-11.411-0.0458Yes
258IFNAR11442222_at 1449026_at21902-11.581-0.0225Yes
259MIER11433755_at 1443400_at 1443879_at 1453760_at21909-11.7800.0012Yes
Table: GSEA details [plain text format]



Fig 2: PROTEIN_KINASE_CASCADE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: PROTEIN_KINASE_CASCADE: Random ES distribution   
Gene set null distribution of ES for PROTEIN_KINASE_CASCADE