Details for gene set NUCLEOLUS[GSEA]

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_minus
GeneSet	NUCLEOLUS
Enrichment Score (ES)	0.47482073
Normalized Enrichment Score (NES)	1.8819375
Nominal p-value	0.0
FDR q-value	0.024603875
FWER p-Value	0.323

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	LYAR	1417511_at	49	7.195	0.0334	Yes
2	DDX21	1448270_at 1448271_a_at	78	6.474	0.0643	Yes
3	NOL5A	1426533_at 1455035_s_at	98	6.200	0.0942	Yes
4	RPP30	1423373_at	115	5.947	0.1229	Yes
5	CIRH1A	1423884_at	116	5.946	0.1524	Yes
6	MKI67IP	1424001_at	122	5.908	0.1815	Yes
7	NOLA2	1416605_at 1416606_s_at	167	5.483	0.2067	Yes
8	NUFIP1	1448802_at	170	5.457	0.2337	Yes
9	UTP18	1447266_at 1454817_at	185	5.342	0.2595	Yes
10	MYBBP1A	1423430_at 1423431_a_at	201	5.249	0.2849	Yes
11	PARP1	1422502_at 1422503_s_at 1435368_a_at 1443573_at	202	5.247	0.3109	Yes
12	IKBKAP	1424142_at 1451254_at	240	5.062	0.3343	Yes
13	RPS19BP1	1455174_at	289	4.824	0.3561	Yes
14	MORF4L2	1415778_at 1439413_x_at	627	3.693	0.3589	Yes
15	CD3EAP	1430138_at	632	3.687	0.3770	Yes
16	XRN2	1422842_at 1450777_at	775	3.426	0.3875	Yes
17	NOL1	1424019_at	843	3.287	0.4008	Yes
18	NHP2L1	1416973_at	846	3.280	0.4170	Yes
19	BXDC5	1428020_at 1431784_a_at 1459573_at	916	3.164	0.4295	Yes
20	EXOSC9	1418462_at	1068	2.979	0.4374	Yes
21	NCL	1415771_at 1415772_at 1415773_at 1442404_at 1456528_x_at	1203	2.812	0.4452	Yes
22	SDAD1	1437088_at 1452454_at	1251	2.766	0.4567	Yes
23	POLR1E	1419058_at 1435057_x_at	1409	2.616	0.4625	Yes
24	CDKN2A	1450140_a_at	1423	2.597	0.4748	Yes
25	TAF5	1435474_at	1781	2.291	0.4698	No
26	FGF18	1449545_at	2013	2.147	0.4699	No
27	FMR1	1423369_at 1426086_a_at 1452550_a_at	2345	1.975	0.4646	No
28	NOLC1	1428869_at 1428870_at 1450087_a_at	2868	1.765	0.4494	No
29	ABL1	1423999_at 1441291_at 1444134_at 1445153_at	2923	1.744	0.4556	No
30	DDX56	1423815_at	3036	1.704	0.4589	No
31	ILF2	1417948_s_at 1417949_at	3085	1.688	0.4651	No
32	DDX24	1415713_a_at 1441631_at	3213	1.649	0.4675	No
33	RPS7	1435593_x_at	3407	1.589	0.4665	No
34	ELP3	1426643_at 1436762_x_at 1437338_x_at 1443452_at	3571	1.537	0.4667	No
35	POP1	1428458_at 1441002_at	3683	1.505	0.4690	No
36	TOP2A	1427724_at 1442454_at 1454694_a_at	4229	1.366	0.4509	No
37	DDX47	1423752_at 1438380_at 1438381_x_at	4895	1.221	0.4265	No
38	DDX54	1438853_x_at 1447882_x_at 1460396_at	5164	1.171	0.4200	No
39	TSPYL2	1434849_at	6007	1.025	0.3865	No
40	TCOF1	1423600_a_at 1423601_s_at 1424643_at	6025	1.022	0.3908	No
41	ASNA1	1418292_at	6275	0.986	0.3843	No
42	GNL3	1433656_a_at 1440766_at	6421	0.963	0.3825	No
43	POLR2A	1422311_a_at 1426242_at 1458710_at	6566	0.943	0.3806	No
44	NOL6	1424472_at 1425629_a_at	7189	0.845	0.3563	No
45	RPL11	1417615_a_at	7194	0.844	0.3603	No
46	NPM1	1415839_a_at 1420267_at 1420268_x_at 1420269_at 1432416_a_at	7230	0.837	0.3628	No
47	TP53	1426538_a_at 1427739_a_at 1438808_at 1457623_x_at 1459780_at 1459781_x_at	7499	0.796	0.3545	No
48	APTX	1450921_at	7520	0.793	0.3575	No
49	IMP3	1416210_at	7559	0.786	0.3597	No
50	WRN	1425074_at 1425982_a_at 1450163_a_at	7800	0.754	0.3524	No
51	PNMA1	1429224_at	7907	0.737	0.3512	No
52	POLA1	1419397_at 1456285_at 1459319_at 1459963_at	7926	0.736	0.3541	No
53	NOL4	1430189_at 1441447_at 1456387_at	7928	0.736	0.3577	No
54	RPP40	1424792_at 1443750_s_at	8057	0.718	0.3554	No
55	SRP68	1433708_at	8656	0.625	0.3311	No
56	DDX11	1438447_at 1441062_at	8688	0.620	0.3327	No
57	THAP2	1421177_at 1455336_at	9528	0.500	0.2968	No
58	EXOSC10	1423587_a_at 1431832_x_at 1437294_at 1454021_a_at	10171	0.415	0.2695	No
59	KRR1	1420139_s_at 1428084_at 1444726_at 1452658_at	10572	0.356	0.2529	No
60	NEK11	1441525_at 1445012_at	11317	0.251	0.2201	No
61	NOL8	1428950_s_at 1428951_at 1452974_at	11360	0.246	0.2194	No
62	POP7	1449162_at	11457	0.232	0.2161	No
63	NF2	1421820_a_at 1427708_a_at 1450382_at 1451829_a_at	11905	0.165	0.1965	No
64	NOLA3	1423210_a_at 1423211_at	12440	0.086	0.1725	No
65	SLC29A2	1447748_x_at 1448257_at	13404	-0.072	0.1287	No
66	MPHOSPH1	1419792_at 1439695_a_at 1440924_at 1449612_x_at	13636	-0.110	0.1187	No
67	UTP20	1452252_at 1459028_at	15183	-0.401	0.0499	No
68	PTBP1	1424874_a_at 1450443_at 1458284_at	15242	-0.414	0.0493	No
69	COIL	1416692_at	15424	-0.462	0.0433	No
70	CCNT1	1419313_at 1456477_at	15780	-0.550	0.0298	No
71	IMP4	1426213_at 1426214_at	16163	-0.644	0.0155	No
72	TOP1	1423474_at 1438495_at 1457573_at 1459672_at	16190	-0.655	0.0176	No
73	MDM2	1423605_a_at 1427718_a_at 1457929_at	16738	-0.819	-0.0034	No
74	MPHOSPH10	1429080_at 1431388_at	16898	-0.868	-0.0064	No
75	NOC4L	1423826_at 1423827_s_at 1438095_x_at 1443794_x_at	16956	-0.886	-0.0046	No
76	SURF6	1416864_at 1459331_at	17038	-0.916	-0.0038	No
77	GEMIN4	1433622_at	17135	-0.946	-0.0035	No
78	UBTF	1453097_a_at 1455490_at 1460304_a_at	17261	-0.987	-0.0043	No
79	ERCC6	1441595_at 1442604_at	17408	-1.033	-0.0059	No
80	KLHL7	1428091_at 1452660_s_at	17837	-1.208	-0.0195	No
81	NOL3	1444786_at 1451503_at	17964	-1.263	-0.0190	No
82	PML	1448757_at 1456103_at 1459137_at	18354	-1.441	-0.0296	No
83	REXO4	1434113_a_at 1434114_at	18526	-1.527	-0.0299	No
84	RPS19	1449243_a_at 1460442_at	18579	-1.547	-0.0246	No
85	RPL35	1416243_a_at 1434231_x_at 1436840_x_at 1454833_at 1454856_x_at 1455950_x_at	18589	-1.550	-0.0173	No
86	SMUG1	1428763_at	18756	-1.640	-0.0168	No
87	TOP2B	1416731_at 1416732_at 1448458_at 1456688_at	18886	-1.709	-0.0142	No
88	DEDD2	1452070_at	19361	-2.047	-0.0258	No
89	ZNF346	1417088_at 1448581_at	19880	-2.456	-0.0373	No
90	DNAJB9	1417191_at	20131	-2.729	-0.0352	No
91	EMG1	1416393_at	20217	-2.820	-0.0251	No
92	DEDD	1432000_a_at 1434994_at 1434995_s_at	20229	-2.833	-0.0116	No
93	NSUN2	1423850_at 1453759_at	21565	-5.746	-0.0442	No
94	EXOSC1	1432052_at 1452012_a_at 1453359_at	21926	-12.304	0.0004	No