Details for gene set MITOCHONDRIAL

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_minus
GeneSet	MITOCHONDRIAL_PART
Enrichment Score (ES)	0.43954614
Normalized Enrichment Score (NES)	1.8730692
Nominal p-value	0.0
FDR q-value	0.026122354
FWER p-Value	0.355

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CYCS	1422484_at 1445484_at	57	6.950	0.0212	Yes
2	ETFA	1423972_at	100	6.170	0.0404	Yes
3	MRPS22	1416595_at 1443032_at	112	5.973	0.0604	Yes
4	ATP5G1	1416020_a_at 1444874_at	166	5.484	0.0768	Yes
5	PITRM1	1426453_at 1456577_x_at	220	5.167	0.0920	Yes
6	MRPL12	1452048_at	298	4.780	0.1049	Yes
7	MRPL55	1429453_a_at	336	4.608	0.1190	Yes
8	VDAC3	1416175_a_at	396	4.369	0.1313	Yes
9	TIMM10	1417499_at	398	4.354	0.1461	Yes
10	BAX	1416837_at	419	4.277	0.1599	Yes
11	ATP5F1	1426742_at 1433562_s_at	441	4.198	0.1733	Yes
12	ATP5J	1416143_at	484	4.064	0.1853	Yes
13	MRPS36	1423242_at	489	4.052	0.1990	Yes
14	TIMM17A	1426256_at	493	4.032	0.2127	Yes
15	ABCB6	1422524_at	559	3.836	0.2229	Yes
16	MRPS28	1452585_at	583	3.786	0.2348	Yes
17	MRPS15	1430100_at 1449294_at 1456109_a_at	600	3.752	0.2469	Yes
18	MRPL32	1424372_at	617	3.723	0.2589	Yes
19	SLC25A15	1420966_at 1420967_at	635	3.684	0.2708	Yes
20	MRPS18C	1427901_at	656	3.647	0.2824	Yes
21	TIMM23	1416485_at	724	3.513	0.2913	Yes
22	VDAC2	1415990_at	764	3.443	0.3013	Yes
23	MTX2	1430500_s_at	861	3.263	0.3081	Yes
24	MRPL51	1416877_a_at 1416878_at 1416879_at	960	3.102	0.3143	Yes
25	CS	1422577_at 1422578_at 1450667_a_at	1003	3.055	0.3228	Yes
26	MRPS35	1452111_at	1026	3.019	0.3321	Yes
27	ACN9	1456614_at	1084	2.964	0.3397	Yes
28	NDUFA6	1448427_at	1154	2.876	0.3464	Yes
29	ATP5E	1416567_s_at	1197	2.821	0.3541	Yes
30	TIMM8B	1431665_a_at	1229	2.788	0.3623	Yes
31	SUPV3L1	1432623_at 1460557_at	1292	2.731	0.3688	Yes
32	MSTO1	1424577_at	1407	2.621	0.3725	Yes
33	BNIP3	1422470_at	1546	2.478	0.3747	Yes
34	SDHD	1428235_at 1437489_x_at	1584	2.447	0.3814	Yes
35	ABCF2	1423863_at	1595	2.433	0.3893	Yes
36	HTRA2	1436269_s_at 1460495_s_at	1735	2.327	0.3909	Yes
37	MRPL40	1448849_at	1796	2.281	0.3959	Yes
38	TOMM22	1429103_at 1434420_x_at	1879	2.231	0.3998	Yes
39	SLC25A1	1428190_at	1881	2.229	0.4074	Yes
40	NDUFS3	1423737_at	2167	2.064	0.4014	Yes
41	TFB2M	1423441_at	2220	2.040	0.4060	Yes
42	PHB	1435144_at 1442233_at 1448563_at	2277	2.011	0.4103	Yes
43	PPOX	1416618_at 1441862_at 1448065_at	2341	1.977	0.4142	Yes
44	GRPEL1	1417320_at	2421	1.942	0.4173	Yes
45	MRPS12	1448799_s_at	2475	1.912	0.4214	Yes
46	UQCRB	1416337_at 1455997_a_at	2573	1.869	0.4233	Yes
47	TIMM13	1455211_a_at	2589	1.864	0.4290	Yes
48	NDUFV1	1415966_a_at 1415967_at 1456015_x_at	2680	1.831	0.4312	Yes
49	NDUFS1	1425143_a_at 1453354_at	2898	1.750	0.4272	Yes
50	ETFB	1428181_at	2973	1.726	0.4298	Yes
51	NFS1	1416373_at 1431431_a_at 1442017_at	3069	1.693	0.4312	Yes
52	ATP5G2	1415980_at 1456128_at	3231	1.642	0.4294	Yes
53	ATP5O	1416278_a_at	3288	1.626	0.4324	Yes
54	HADHB	1437172_x_at	3326	1.614	0.4363	Yes
55	HCCS	1420889_at 1420890_at	3375	1.596	0.4395	Yes
56	TIMM9	1428010_at 1449886_a_at	3896	1.447	0.4207	No
57	UCP3	1420657_at 1420658_at	4020	1.415	0.4199	No
58	VDAC1	1415998_at 1436992_x_at 1437192_x_at 1437452_x_at 1437947_x_at	4127	1.387	0.4198	No
59	OXA1L	1423738_at 1451088_a_at 1456845_at	4393	1.327	0.4122	No
60	SLC25A3	1416300_a_at 1440302_at	4871	1.225	0.3945	No
61	NDUFS7	1424313_a_at 1451312_at	5319	1.140	0.3779	No
62	BCS1L	1451541_at	5341	1.137	0.3808	No
63	UQCRC1	1428782_a_at	7782	0.757	0.2715	No
64	RAB11FIP5	1427405_s_at 1434314_s_at	7911	0.737	0.2681	No
65	ATP5G3	1454661_at	8049	0.719	0.2643	No
66	IMMT	1429533_at 1429534_a_at 1433470_a_at 1437126_at	8191	0.694	0.2602	No
67	BCKDK	1443813_x_at 1460644_at	8367	0.668	0.2545	No
68	GATM	1423569_at	8748	0.612	0.2392	No
69	MAOB	1434354_at	8848	0.598	0.2367	No
70	NDUFB6	1434056_a_at 1434057_at	9085	0.565	0.2278	No
71	MFN2	1441424_at 1448131_at 1451900_at	9388	0.521	0.2157	No
72	ABCB7	1419931_at 1427490_at 1435006_s_at	9390	0.521	0.2175	No
73	BCKDHA	1416647_at	9580	0.493	0.2105	No
74	PHB2	1416202_at 1438938_x_at 1455713_x_at 1460035_at	9614	0.488	0.2106	No
75	MRPS16	1448869_a_at	11237	0.264	0.1372	No
76	MRPS24	1438563_s_at 1450865_s_at	11307	0.253	0.1349	No
77	OPA1	1418768_at 1434890_at 1449214_a_at	11357	0.246	0.1335	No
78	CENTA2	1425638_at	11367	0.245	0.1339	No
79	MRPL10	1418112_at	11538	0.221	0.1268	No
80	COX15	1426693_x_at 1437982_x_at 1452146_a_at 1460376_a_at	11646	0.205	0.1226	No
81	ATP5D	1423716_s_at 1456580_s_at	12123	0.132	0.1013	No
82	COX6B2	1435275_at	13000	-0.002	0.0611	No
83	NDUFAB1	1428159_s_at 1428160_at 1435934_at 1447919_x_at 1453565_at 1458678_at	13197	-0.035	0.0522	No
84	NDUFA9	1416663_at	13420	-0.074	0.0423	No
85	NDUFS8	1423907_a_at 1423908_at 1434212_at 1434213_x_at 1434579_x_at 1455283_x_at	14370	-0.246	-0.0004	No
86	HSD3B1	1448453_at	14423	-0.258	-0.0019	No
87	POLG2	1450816_at	14430	-0.258	-0.0013	No
88	UQCRH	1452133_at 1453229_s_at	14571	-0.281	-0.0067	No
89	ATP5A1	1420037_at 1423111_at 1449710_s_at	14754	-0.319	-0.0140	No
90	NDUFA1	1422241_a_at	14778	-0.324	-0.0139	No
91	ABCB8	1422015_a_at 1423713_at 1460022_at	15106	-0.387	-0.0276	No
92	BCKDHB	1427153_at	15311	-0.431	-0.0355	No
93	ATP5B	1416829_at	15400	-0.456	-0.0380	No
94	BCL2	1422938_at 1427818_at 1437122_at 1440770_at 1443837_x_at 1457687_at	15444	-0.468	-0.0383	No
95	MRPS21	1422451_at	15528	-0.489	-0.0405	No
96	NDUFS4	1418117_at 1438166_x_at 1444464_at 1448959_at 1459760_at	15561	-0.499	-0.0402	No
97	MRPL23	1416948_at	15873	-0.571	-0.0525	No
98	SDHA	1426688_at 1426689_s_at 1445317_at	15990	-0.599	-0.0558	No
99	TIMM44	1417670_at 1439371_x_at 1448801_a_at	16051	-0.616	-0.0564	No
100	ACADM	1415984_at	16096	-0.628	-0.0563	No
101	NDUFS2	1451096_at	16183	-0.653	-0.0580	No
102	MRPL41	1428588_a_at 1428589_at 1428590_at	16703	-0.810	-0.0790	No
103	HSD3B2	1425127_at	16743	-0.821	-0.0780	No
104	NR3C1	1421866_at 1421867_at 1453860_s_at 1457635_s_at 1460303_at	17087	-0.932	-0.0905	No
105	DBT	1440016_at 1449118_at	17138	-0.947	-0.0896	No
106	MRPL52	1415761_at 1415762_x_at 1455366_at 1460701_a_at	17377	-1.023	-0.0970	No
107	NDUFA2	1417368_s_at	17416	-1.034	-0.0952	No
108	DNAJA3	1420629_a_at 1432066_at 1449935_a_at	17431	-1.039	-0.0923	No
109	TOMM34	1448345_at	17924	-1.244	-0.1106	No
110	SURF1	1450561_a_at	18212	-1.370	-0.1191	No
111	RHOT1	1423533_a_at 1440853_at	18378	-1.451	-0.1216	No
112	MRPS11	1455233_at 1460195_at	18454	-1.488	-0.1200	No
113	PMPCA	1424661_at 1424662_at	18901	-1.722	-0.1345	No
114	MRPS18A	1416984_at 1457813_at	19006	-1.801	-0.1331	No
115	CASQ1	1422598_at	19471	-2.111	-0.1472	No
116	ATP5C1	1416058_s_at 1438809_at	19475	-2.113	-0.1401	No
117	SLC25A22	1452653_at	19529	-2.152	-0.1351	No
118	ALDH4A1	1452375_at	19866	-2.439	-0.1422	No
119	TIMM50	1441819_x_at 1455456_a_at	19924	-2.506	-0.1362	No
120	NDUFA13	1430713_s_at	20037	-2.613	-0.1324	No
121	TIMM17B	1438656_x_at 1460685_at	20258	-2.864	-0.1327	No
122	MPV17	1420387_at	20269	-2.873	-0.1233	No
123	OGDH	1445632_at 1451274_at	20571	-3.284	-0.1258	No
124	FIS1	1416764_at 1443819_x_at	21015	-3.943	-0.1326	No
125	RAF1	1416078_s_at 1425419_a_at	21295	-4.634	-0.1296	No
126	RHOT2	1426822_at	21309	-4.676	-0.1141	No
127	ALAS2	1451675_a_at	21376	-4.863	-0.1005	No
128	SLC25A11	1426586_at	21425	-5.058	-0.0853	No
129	NNT	1416105_at 1432608_at 1456573_x_at	21499	-5.404	-0.0702	No
130	MRPS10	1428153_at 1458999_at	21513	-5.460	-0.0521	No
131	MCL1	1416880_at 1416881_at 1437527_x_at 1448503_at 1456243_x_at 1456381_x_at	21868	-9.776	-0.0348	No
132	CASP7	1426062_a_at 1448659_at	21890	-11.018	0.0020	No