DatasetSet_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls
#ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls
#ATM_minus_versus_ATM_plus_repos
Phenotypephenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in classATM_plus
GeneSetIMMUNE_SYSTEM_PROCESS
Enrichment Score (ES)-0.41690862
Normalized Enrichment Score (NES)-1.7239689
Nominal p-value0.0
FDR q-value0.35024664
FWER p-Value0.966
Table: GSEA Results Summary



Fig 1: Enrichment plot: IMMUNE_SYSTEM_PROCESS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CEBPB1418901_at 1427844_a_at866.3740.0073No
2GZMA1417898_a_at1145.9570.0167No
3SCYE11416486_at1395.7060.0257No
4IL7R1448575_at 1448576_at1645.5030.0344No
5CNIH1423727_at1875.3380.0428No
6IK1423791_at 1435988_x_at 1439271_x_at 1451113_a_at1935.3010.0520No
7IKBKAP1424142_at 1451254_at2405.0620.0589No
8CTSC1416382_at 1437939_s_at 1446834_at2604.9620.0668No
9FCGR3A1425225_at 1448620_at2954.7990.0738No
10DYRK31424229_at4434.1910.0744No
11FCGRT1416978_at5213.9460.0779No
12NCF41418465_at5243.9410.0848No
13MYH91417472_at 1420170_at 1420171_s_at 1420172_at 1440708_at5873.7790.0886No
14TREM21421226_at 1421792_s_at7693.4380.0864No
15LCK1425396_a_at 1439145_at 1439146_s_at 1457917_at8193.3380.0901No
16PSMB101448632_at8483.2790.0946No
17TGFB11420653_at 1445360_at8563.2670.1001No
18BST21424921_at8673.2560.1054No
19ANXA111418468_at8843.2230.1104No
20LIG11416641_at9273.1450.1140No
21CCL21420380_at11402.8870.1094No
22CHUK1417091_at 1428210_s_at 1451383_a_at12142.8040.1110No
23TNFAIP11417865_at 1417866_at 1448863_a_at12852.7380.1126No
24PRKRA1447737_at 1448923_at13352.6930.1151No
25POU2AF11416957_at13792.6500.1178No
26KIRREL31431402_at 1441357_at 1452728_at15452.4800.1146No
27BNIP31422470_at15462.4780.1190No
28CTSE1418989_at16132.4170.1203No
29GPR651449175_at17062.3560.1202No
30PF41448995_at17382.3260.1229No
31YTHDF21451317_at 1460357_at17972.2810.1243No
32NFIL31418932_at19442.1940.1214No
33TCF71433471_at 1450461_at19642.1830.1244No
34IL2RA1420691_at 1420692_at20562.1260.1240No
35MAP3K71419988_at 1425795_a_at 1426627_at 1449693_at 1455441_at 1458787_at21652.0660.1227No
36CLEC7A1420699_at22322.0330.1233No
37CXCL131417851_at 1448859_at22532.0230.1259No
38NCK11421487_a_at 1424543_at 1447271_at24321.9340.1211No
39IL17A1421672_at24671.9180.1230No
40SCG21450708_at26091.8590.1198No
41IGSF61421408_at 1445302_at26171.8560.1227No
42C5AR11422190_at 1439902_at27451.8070.1201No
43GLMN1418839_at28641.7660.1178No
44TGFB21423250_a_at 1438303_at 1446141_at 1450922_a_at 1450923_at30491.6990.1123No
45CSF11425154_a_at 1425155_x_at 1448914_a_at 1460220_a_at31741.6580.1095No
46OPRD11422121_at32671.6330.1082No
47CCR21421186_at 1421187_at 1421188_at 1460067_at34561.5760.1023No
48BST11449453_at 1449454_at36821.5060.0946No
49BNIP3L1416922_a_at 1416923_a_at 1448525_a_at38751.4510.0883No
50SEMA3C1420696_at 1429348_at46081.2750.0567No
51CD2761417599_at46671.2620.0563No
52COLEC121419693_at 1446535_at46791.2590.0580No
53MS4A21421475_at 1443264_at47201.2530.0584No
54NFAM11425714_a_at 1428790_at47331.2500.0601No
55IL101450330_at47591.2460.0611No
56ODZ11421508_at47891.2400.0620No
57SPACA31429970_at 1443825_x_at48131.2360.0631No
58RSAD21421008_at 1421009_at 1436058_at49771.2030.0577No
59AKT11416657_at 1425711_a_at 1440950_at 1442759_at50611.1880.0560No
60CDK61435338_at 1440040_at 1455287_at 1460291_at52351.1560.0501No
61BLNK1451780_at53981.1270.0446No
62LAT21426169_a_at54951.1090.0421No
63CD241416034_at 1437502_x_at 1448182_a_at56141.0870.0386No
64IL18BP1450424_a_at60431.0190.0206No
65C21416051_at 1441912_x_at 1457664_x_at60741.0140.0211No
66LY861422903_at60831.0120.0225No
67SKAP11437249_at 1440326_at 1440782_at 1441322_at 1441418_at 1441589_at 1456678_at60861.0120.0242No
68POU2F21427713_x_at 1427725_a_at62720.9870.0174No
69MBL21418787_at64020.9660.0132No
70HDAC91421306_a_at 1434572_at64500.9600.0127No
71CCL191449277_at66800.9220.0038No
72SOD11435304_at 1440222_at 1440896_at 1451124_at 1459976_s_at66990.9190.0046No
73LTB4R1420407_at67970.9070.0017No
74IL12A1425454_a_at69050.891-0.0017No
75INHA1422728_at69080.890-0.0002No
76DPP41416697_at 1438279_at 1441242_at 1441342_at 1459973_x_at70500.867-0.0052No
77CX3CL11415803_at 1415804_at 1421610_at 1441884_x_at70520.866-0.0037No
78LRMP1448409_at71470.851-0.0065No
79CMKLR11426072_at 1456887_at71640.849-0.0057No
80IFITM31423754_at73030.825-0.0106No
81CD79A1418830_at73680.816-0.0121No
82JAG21426430_at 1426431_at73840.814-0.0114No
83PTAFR1427871_at 1427872_at74000.810-0.0106No
84SOCS51423349_at 1423350_at 1441640_at 1442890_at75140.794-0.0145No
85EREG1419431_at75460.789-0.0145No
86ACVR2A1437382_at 1439643_at 1445026_at 1451004_at76050.780-0.0158No
87UBE2N1422559_at 1435384_at76990.767-0.0187No
88APOA21417950_a_at79290.735-0.0280No
89TLR41418162_at 1418163_at 1430695_at 1442827_at79690.731-0.0285No
90FCGR2B1435476_a_at 1435477_s_at 1447622_at 1451941_a_at 1455332_x_at81030.711-0.0334No
91CCR11419609_at 1419610_at81120.709-0.0325No
92CCL241450488_at81380.703-0.0324No
93TPD521419493_a_at 1419494_a_at 1436008_at 1458668_at81390.703-0.0311No
94CCRL11426139_a_at 1437668_at 1437669_x_at81600.700-0.0308No
95FTH11448771_a_at81900.695-0.0309No
96IL211450334_at81920.694-0.0297No
97ZBTB161419874_x_at 1427638_at 1439163_at 1445562_at 1456986_at 1459557_at82140.691-0.0295No
98CD861420404_at 1449858_at82510.686-0.0299No
99HRH21423639_at83290.674-0.0323No
100HELLS1417541_at 1430139_at 1453361_at83810.666-0.0334No
101CXCL121417574_at 1439084_at 1448823_at84260.660-0.0343No
102PTPRC1422124_a_at 1440165_at85470.641-0.0387No
103MLF11418589_a_at87670.610-0.0477No
104OPRK11446394_at 1451813_at87740.609-0.0469No
105SPI11418747_at89840.579-0.0556No
106IL8RB1421734_at91010.560-0.0599No
107RGS11417601_at92180.544-0.0643No
108DEFB103A1421806_at95550.496-0.0790No
109IFITM21417460_at95710.494-0.0788No
110TLR71419848_x_at 1422010_at 1449640_at99970.435-0.0976No
111NCK21416796_at 1416797_at 1458432_at100810.425-0.1007No
112CCL41421578_at101520.417-0.1032No
113PDCD11449835_at101880.413-0.1041No
114SECTM11419478_at 1419479_at101950.411-0.1036No
115IL181417932_at104010.382-0.1124No
116RAB3D1418890_a_at 1418891_a_at 1449259_at 1449260_at104080.381-0.1120No
117IL28RA1446908_at 1460598_at105600.358-0.1184No
118TM7SF41431970_at106940.340-0.1239No
119IL71422080_at 1436861_at107290.336-0.1249No
120GTPBP11450022_at 1450023_at107760.329-0.1264No
121CD21418770_at108520.319-0.1293No
122CHST41453393_a_at109060.313-0.1312No
123MAL1417275_at 1432558_a_at110220.298-0.1360No
124SPINK51430567_at111640.276-0.1420No
125PRL1429287_a_at111900.271-0.1427No
126CCR51422259_a_at 1422260_x_at 1424727_at112110.269-0.1431No
127IL17B1431693_a_at113900.242-0.1509No
128CD471419554_at 1428187_at 1430997_at 1449507_a_at 1458634_at 1459908_at114020.240-0.1510No
129IL61450297_at116090.212-0.1601No
130SAA11419075_s_at 1450788_at121890.122-0.1867No
131CFHR11419436_at122130.118-0.1875No
132DEFB11419491_at 1419492_s_at124870.078-0.2000No
133APOA41417761_at 1436504_x_at127050.046-0.2099No
134CTSS1448591_at128680.023-0.2174No
135ICOSLG1419212_at 1426087_at128700.023-0.2174No
136IL151418219_at129870.000-0.2227No
137TCF121421908_a_at 1427670_a_at 1438762_at 1439209_at 1439619_at 1443012_at 1444620_at 1445093_at 1445133_at 1457524_at 1458337_at13113-0.022-0.2285No
138TBX11425779_a_at13194-0.035-0.2321No
139GPR441422275_at13198-0.036-0.2322No
140APOA11419232_a_at 1419233_x_at 1438840_x_at 1455201_x_at13233-0.043-0.2337No
141NOTCH41436901_at 1449146_at 1456263_at13241-0.044-0.2339No
142PRG31449924_at13292-0.053-0.2361No
143EBI31449222_at13342-0.061-0.2383No
144CIITA1421210_at 1421211_a_at 1447075_at13365-0.064-0.2392No
145CD221419768_at 1419769_at 1445222_at13400-0.071-0.2406No
146AQP91421605_a_at 1424011_at13534-0.092-0.2466No
147CD741425519_a_at13586-0.100-0.2488No
148VIPR11423004_at13594-0.102-0.2489No
149DMBT11418287_a_at13761-0.136-0.2563No
150LAT1460651_at13781-0.141-0.2570No
151IL41449864_at13829-0.148-0.2589No
152NHEJ11425651_at 1429098_s_at13901-0.160-0.2619No
153MBP1419646_a_at 1425263_a_at 1425264_s_at 1433532_a_at 1436201_x_at 1451961_a_at 1454651_x_at 1456228_x_at13938-0.167-0.2632No
154SYK1418261_at 1418262_at 1425797_a_at 1457239_at13945-0.167-0.2632No
155NCR11422089_at14117-0.198-0.2708No
156IL1R21419532_at 1457108_at14173-0.208-0.2729No
157ATP6V0A21424513_at 1434791_at 1449870_a_at14269-0.227-0.2769No
158CD40LG1422283_at14368-0.246-0.2810No
159TARBP21423616_at 1438952_x_at14619-0.291-0.2920No
160CST71419202_at 1445263_at14691-0.306-0.2948No
161VTN1420484_a_at 1455098_a_at14724-0.313-0.2957No
162BCL101418970_a_at 1418971_x_at 1418972_at 1443524_x_at14734-0.314-0.2956No
163SLA21437504_at 1451492_at14749-0.318-0.2956No
164LY751449328_at14832-0.335-0.2988No
165CRHR11418810_at 1427782_a_at14969-0.362-0.3045No
166FYN1417558_at 1441647_at 1448765_at15050-0.377-0.3075No
167ELF41421337_at 1445778_at15166-0.398-0.3121No
168CCL251418777_at 1458277_at15299-0.429-0.3174No
169HDAC41436758_at 1447566_at 1454693_at15404-0.456-0.3214No
170BCL21422938_at 1427818_at 1437122_at 1440770_at 1443837_x_at 1457687_at15444-0.468-0.3224No
171MADCAM11425253_a_at15562-0.500-0.3269No
172CD341416072_at15586-0.506-0.3271No
173DPP81428697_at 1431064_at 1445705_x_at15659-0.524-0.3295No
174CNR21450476_at15827-0.562-0.3362No
175SART11448658_at15832-0.562-0.3354No
176APLN1451038_at15917-0.579-0.3382No
177TRAF61421376_at 1421377_at 1435350_at 1443288_at 1446940_at 1446977_at15940-0.585-0.3382No
178LIG31423419_at 1425865_a_at 1431715_a_at 1437198_at 1453986_at15988-0.598-0.3393No
179CCL201422029_at16011-0.605-0.3392No
180CCBP21422111_at 1422112_at 1437937_at16073-0.621-0.3410No
181TREM11447284_at 1460282_at16298-0.686-0.3501No
182BCAR11439388_s_at 1450622_at16323-0.693-0.3500No
183TLR81450267_at16368-0.707-0.3507No
184SFTPD1420378_at16384-0.711-0.3502No
185ST6GAL11420927_at 1420928_at 1443581_at 1446739_at16475-0.738-0.3530No
186CRTAM1449903_at16534-0.755-0.3544No
187MR11421898_a_at 1421899_a_at16732-0.818-0.3620No
188ZAP701422701_at 1439749_at 1440178_x_at16831-0.851-0.3650No
189IL161417391_a_at 1443796_at 1447814_x_at 1448686_at16869-0.859-0.3652No
190RASGRP41425380_at16928-0.879-0.3663No
191PAX51421765_at 1459916_at16976-0.893-0.3669No
192GEM1426063_a_at16983-0.895-0.3656No
193LST11425548_a_at17035-0.914-0.3663No
194MS4A11423226_at 1450912_at17171-0.955-0.3709No
195CD1641416440_at 1431527_at17226-0.975-0.3716No
196CALCA1427355_at 1452004_at17264-0.987-0.3716No
197MYST31436315_at 1437487_at 1446143_at 1446405_at17281-0.994-0.3705No
198MALT11445068_at 1456126_at 1456429_at17437-1.041-0.3759No
199CARTPT1422825_at17694-1.151-0.3856No
200IL31RA1445095_at 1451535_at17860-1.218-0.3911No
201MAFB1451715_at 1451716_at17950-1.255-0.3930No
202IL4R1421034_a_at 1423996_a_at 1447858_x_at18059-1.299-0.3957No
203FYB1452117_a_at18093-1.312-0.3949No
204DEFB41419600_at 1450554_at18122-1.323-0.3938No
205TNFSF131445227_at18246-1.386-0.3970No
206INHBA1422053_at 1458291_at18304-1.420-0.3971No
207CCL271419188_s_at 1430375_a_at 1434962_x_at18499-1.515-0.4034No
208RPS191449243_a_at 1460442_at18579-1.547-0.4043No
209CEBPG1425261_at 1425262_at 1451639_at18590-1.550-0.4020No
210CTSG1419594_at18690-1.590-0.4038No
211IL6R1422270_a_at 1452416_at18765-1.651-0.4042No
212IL12B1419530_at 1449497_at18776-1.658-0.4018No
213CTLA41419334_at18865-1.700-0.4028No
214CCR91421919_a_at 1421920_a_at 1427419_x_at18957-1.761-0.4039No
215CCR61450357_a_at19057-1.833-0.4052No
216WAS1419631_at19083-1.848-0.4031No
217IL10RB1419455_at19332-2.035-0.4109No
218THY11423135_at19411-2.080-0.4108No
219PTGER41421073_a_at 1424208_at 1436441_at19544-2.156-0.4131Yes
220ACIN11416568_a_at 1421197_a_at19613-2.207-0.4123Yes
221CD971418394_a_at19697-2.277-0.4121Yes
222CD961419226_at19752-2.330-0.4104Yes
223CD2741419714_at19765-2.347-0.4068Yes
224SCIN1450276_a_at19781-2.361-0.4033Yes
225LCP21418641_at 1418642_at19784-2.363-0.3992Yes
226SEMA4D1420823_at 1420824_at19823-2.402-0.3967Yes
227CD281417597_at 1437025_at 1443703_at19836-2.414-0.3930Yes
228TRAT11427532_at 1437561_at19872-2.448-0.3902Yes
229C1QBP1448274_at 1455821_x_at19937-2.516-0.3887Yes
230MYST11432080_s_at20101-2.698-0.3915Yes
231CDC421415724_a_at 1435807_at 1449574_a_at 1460708_s_at20124-2.723-0.3876Yes
232GBP21418240_at 1435906_x_at20144-2.740-0.3837Yes
233RUNX11422864_at 1422865_at 1427650_a_at 1427847_at 1440878_at 1444527_at 1446930_at 1452530_a_at 1452531_at 1452578_at 1459470_at20173-2.772-0.3800Yes
234CD3E1422105_at 1445748_at20189-2.789-0.3758Yes
235CKLF1424495_a_at 1425769_x_at 1425860_x_at 1436242_a_at 1451374_x_at 1451832_at 1455615_at20268-2.872-0.3743Yes
236DOCK21422808_s_at 1437282_at 1438334_at 1459382_at20285-2.886-0.3699Yes
237TAPBP1421812_at 1450378_at20352-2.979-0.3676Yes
238MMP91416298_at 1448291_at20464-3.107-0.3672Yes
239IKBKG1421208_at 1421209_s_at 1435646_at 1435647_at 1450161_at 1454690_at20492-3.141-0.3629Yes
240FOXP31420765_a_at 1457082_at20497-3.148-0.3575Yes
241LDB11452024_a_at20583-3.296-0.3556Yes
242CD3D1422828_at20605-3.311-0.3507Yes
243CCR41421655_a_at20667-3.401-0.3474Yes
244CXCR41448710_at20678-3.415-0.3418Yes
245MAP4K21428297_at 1434833_at 1450244_a_at20871-3.716-0.3441Yes
246SEMA7A1422040_at 1459903_at21019-3.949-0.3439Yes
247HCLS11418842_at21024-3.955-0.3370Yes
248IRF81416714_at 1448452_at21054-4.014-0.3312Yes
249TAZ1416207_at 1453785_at21062-4.056-0.3244Yes
250TRAF21451233_at21088-4.116-0.3182Yes
251CD831416111_at21143-4.248-0.3132Yes
252LTF1450009_at21155-4.278-0.3061Yes
253CD71419711_at21166-4.295-0.2989Yes
254HDAC51415743_at21182-4.345-0.2919Yes
255SNRK1425678_a_at 1448864_at21203-4.414-0.2850Yes
256IL2RG1416295_a_at 1416296_at21304-4.660-0.2813Yes
257HDAC7A1420812_at 1420813_at21348-4.783-0.2748Yes
258ALAS21451675_a_at21376-4.863-0.2674Yes
259CCL221417925_at21380-4.869-0.2589Yes
260CD41419696_at 1427779_a_at21401-4.963-0.2510Yes
261TNFRSF141452425_at21415-5.011-0.2427Yes
262NOTCH21451889_at 1455556_at21434-5.088-0.2345Yes
263MIA31459984_at21441-5.136-0.2256Yes
264ARHGDIB1426454_at21447-5.166-0.2167Yes
265NCOA61423374_at21491-5.351-0.2092Yes
266IL27RA1449508_at21556-5.694-0.2020Yes
267SP21426237_at 1447730_at21557-5.699-0.1919Yes
268RAG11440574_at 1450680_at21599-5.911-0.1833Yes
269IL6ST1421239_at 1437303_at 1452843_at 1460295_s_at21633-6.090-0.1740Yes
270ACVR1B1422098_at 1433725_at21652-6.207-0.1638Yes
271LAX11438687_at21659-6.247-0.1530Yes
272ETS11422027_a_at 1422028_a_at 1426725_s_at 1452163_at21663-6.261-0.1420Yes
273RFX11422109_at 1436059_at21695-6.668-0.1316Yes
274ITGB21450678_at21698-6.716-0.1198Yes
275CTSW1422632_at21733-7.037-0.1088Yes
276EBI21437356_at 1457691_at21738-7.130-0.0963Yes
277CD79B1417640_at21750-7.294-0.0839Yes
278EDG61451024_at21780-7.858-0.0713Yes
279TNFRSF41420351_at21786-7.955-0.0574Yes
280CCR81422291_at21803-8.207-0.0435Yes
281CCL51418126_at21821-8.504-0.0292Yes
282SIT11418751_at21835-8.815-0.0142Yes
283XBP11420011_s_at 1420012_at 1420886_a_at 1437223_s_at21882-10.5250.0024Yes
Table: GSEA details [plain text format]



Fig 2: IMMUNE_SYSTEM_PROCESS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: IMMUNE_SYSTEM_PROCESS: Random ES distribution   
Gene set null distribution of ES for IMMUNE_SYSTEM_PROCESS