Details for gene set V$SRF_Q5

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$SRF_Q5_01
Enrichment Score (ES)	-0.4687434
Normalized Enrichment Score (NES)	-1.8582352
Nominal p-value	0.0
FDR q-value	0.005964616
FWER p-Value	0.028

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	DSTN	1417124_at	215	5.188	0.0068	No
2	RBBP7	1415775_at 1456227_x_at	397	4.357	0.0124	No
3	RSU1	1419259_at	872	3.244	0.0011	No
4	PELI2	1419006_s_at 1436966_at 1437181_at	1139	2.889	-0.0019	No
5	NFATC4	1423380_s_at 1432821_at 1454369_a_at	1210	2.805	0.0039	No
6	IGF2AS	1427394_at	1212	2.805	0.0128	No
7	TANK	1421640_a_at 1441513_at 1459668_at	1645	2.397	0.0007	No
8	PPARG	1420715_a_at	1758	2.313	0.0030	No
9	CTNND1	1422450_at 1437448_s_at 1445830_at	2028	2.140	-0.0025	No
10	ATF3	1449363_at	2096	2.106	0.0011	No
11	NR2F1	1418157_at 1422412_x_at	2246	2.026	0.0008	No
12	CKM	1417614_at	2272	2.014	0.0061	No
13	FOSB	1422134_at	2565	1.874	-0.0013	No
14	PDLIM7	1417959_at 1428319_at 1443785_x_at	2659	1.838	0.0003	No
15	SLC2A4	1415958_at 1415959_at	2738	1.810	0.0026	No
16	LCP1	1415983_at 1448160_at	2847	1.771	0.0033	No
17	NPR3	1435184_at 1448024_at 1450286_at	3322	1.615	-0.0133	No
18	GGN	1445278_at	3325	1.614	-0.0082	No
19	STARD13	1452604_at	3400	1.590	-0.0065	No
20	SERTAD4	1454877_at	3502	1.562	-0.0062	No
21	EMILIN2	1435264_at	3620	1.522	-0.0067	No
22	CSDA	1435800_a_at 1451012_a_at	3676	1.507	-0.0044	No
23	ADAMTSL1	1430313_at	3728	1.495	-0.0019	No
24	FGF17	1421523_at 1456239_at	3817	1.471	-0.0012	No
25	TRIM3	1451663_a_at	3934	1.438	-0.0019	No
26	FLNC	1424063_at 1447812_x_at 1449073_at	3937	1.437	0.0026	No
27	MAPKAPK2	1426648_at	4175	1.378	-0.0039	No
28	FGF8	1451882_a_at	4207	1.370	-0.0009	No
29	VCL	1416156_at 1416157_at 1445256_at	4357	1.338	-0.0035	No
30	SLC16A6	1417884_at	4424	1.319	-0.0023	No
31	MYL9	1452670_at	4523	1.296	-0.0026	No
32	RHOJ	1418892_at 1444982_at	5109	1.181	-0.0257	No
33	CALD1	1424768_at 1424769_s_at 1424770_at 1433146_at 1433147_at 1458057_at	5586	1.092	-0.0441	No
34	SRD5A2	1422960_at	5613	1.087	-0.0418	No
35	FGF7	1422243_at 1438405_at	5643	1.082	-0.0397	No
36	PLCB3	1448661_at	5728	1.067	-0.0401	No
37	COL1A1	1423669_at 1455494_at	5877	1.044	-0.0436	No
38	RARB	1454906_at	6055	1.017	-0.0484	No
39	ATF4	1438992_x_at 1439258_at 1448135_at	6092	1.011	-0.0468	No
40	HOXB5	1418415_at	6257	0.989	-0.0512	No
41	CNN1	1417917_at	6328	0.977	-0.0513	No
42	CITED2	1417129_a_at 1421267_a_at 1439915_at 1440091_at 1443561_at 1443926_at 1445638_at 1446176_at 1447861_x_at 1457632_s_at 1459301_at	6475	0.956	-0.0549	No
43	UBE2H	1418631_at 1418632_at 1428791_at 1438971_x_at 1447374_at 1459930_at	6583	0.940	-0.0568	No
44	SCOC	1416267_at 1430999_a_at	6881	0.895	-0.0676	No
45	HOXC4	1422870_at	7807	0.753	-0.1077	No
46	MYL7	1449071_at	7920	0.736	-0.1105	No
47	ASPA	1418472_at	8004	0.724	-0.1120	No
48	H3F3A	1423263_at 1442087_at	8042	0.720	-0.1114	No
49	DVL3	1420457_at	8252	0.685	-0.1188	No
50	NPAS2	1421036_at 1421037_at	8496	0.649	-0.1279	No
51	NKX2-2	1421112_at	8544	0.641	-0.1280	No
52	ITGB6	1422983_at 1432281_a_at	8596	0.634	-0.1283	No
53	SDPR	1416778_at 1416779_at 1443832_s_at	8627	0.630	-0.1276	No
54	ITGB1BP2	1423238_at	8922	0.588	-0.1393	No
55	RIMS1	1435667_at 1438305_at 1444393_at	9272	0.535	-0.1536	No
56	CXCL5	1419728_at	9322	0.529	-0.1541	No
57	SRF	1418255_s_at 1418256_at	9517	0.501	-0.1615	No
58	TIMP3	1419088_at 1419089_at 1449334_at 1449335_at	9554	0.496	-0.1615	No
59	CALN1	1425846_a_at	9668	0.481	-0.1652	No
60	MID1	1422055_at 1438239_at 1441929_at 1443666_at	9686	0.478	-0.1644	No
61	EEF1B2	1448252_a_at	9765	0.467	-0.1665	No
62	TNMD	1417979_at	9870	0.452	-0.1698	No
63	ACTR3	1426392_a_at 1434968_a_at 1452051_at	9979	0.437	-0.1734	No
64	GADD45G	1453851_a_at	10051	0.428	-0.1753	No
65	DUSP10	1417163_at 1417164_at	10091	0.424	-0.1757	No
66	CHST8	1428977_at	10215	0.408	-0.1801	No
67	RAI2	1452358_at	10385	0.385	-0.1866	No
68	GPR20	1440021_at	10847	0.320	-0.2068	No
69	TAGLN	1423505_at	10992	0.301	-0.2124	No
70	OTX1	1437601_at	11004	0.300	-0.2120	No
71	ACTN1	1427385_s_at 1428585_at 1452415_at	11006	0.300	-0.2110	No
72	PLN	1423359_at 1450952_at 1460332_at	11065	0.292	-0.2128	No
73	PRM1	1415955_x_at 1437054_x_at 1439379_x_at	11067	0.292	-0.2119	No
74	ASXL2	1439063_at 1444754_at 1453295_at 1458366_at 1460597_at	11094	0.287	-0.2122	No
75	CFL1	1448346_at 1455138_x_at	11139	0.280	-0.2133	No
76	IL17B	1431693_a_at	11390	0.242	-0.2240	No
77	NPPA	1456062_at	11505	0.225	-0.2285	No
78	EFHD1	1448507_at	11652	0.204	-0.2346	No
79	TRDN	1426134_at 1426142_a_at 1426143_at 1426144_x_at 1451801_at 1451940_x_at	11654	0.204	-0.2340	No
80	LRRTM4	1437214_at 1455937_at	11734	0.192	-0.2370	No
81	SLC25A4	1424562_a_at 1424563_at 1434897_a_at 1455069_x_at	11802	0.182	-0.2395	No
82	ASB2	1428444_at 1436259_at	11839	0.176	-0.2406	No
83	CRH	1457984_at	11875	0.170	-0.2416	No
84	ELAVL4	1428741_at 1450258_a_at 1452894_at 1457399_at	12201	0.120	-0.2562	No
85	PPP2R3A	1455198_a_at	12283	0.108	-0.2596	No
86	KCNA1	1417416_at 1437230_at 1442413_at 1455785_at	12482	0.079	-0.2684	No
87	MYH11	1418122_at 1448962_at	12555	0.069	-0.2715	No
88	PODN	1435180_at	12634	0.058	-0.2749	No
89	TADA3L	1417467_a_at 1448719_at	12851	0.026	-0.2847	No
90	CA3	1430584_s_at 1449434_at 1453588_at 1460256_at	13075	-0.015	-0.2949	No
91	MITF	1422025_at 1455214_at	13369	-0.065	-0.3082	No
92	CORO1C	1417752_at 1419911_at 1437721_at 1442972_at 1449660_s_at 1459169_at	13396	-0.070	-0.3092	No
93	TPM2	1419738_a_at 1419739_at 1425028_a_at 1449577_x_at	13473	-0.082	-0.3124	No
94	DIXDC1	1425256_a_at 1435207_at 1443957_at 1444395_at	13602	-0.103	-0.3180	No
95	DLL1	1419204_at	13684	-0.122	-0.3213	No
96	MAPK14	1416703_at 1416704_at 1426104_at 1442364_at 1451927_a_at 1459617_at	13846	-0.151	-0.3282	No
97	SLC4A3	1418485_at 1453687_at	13905	-0.161	-0.3304	No
98	WNT3	1450763_x_at	14077	-0.191	-0.3376	No
99	MRGPRF	1425894_at	14123	-0.200	-0.3390	No
100	NRAS	1422688_a_at 1454060_a_at	14223	-0.219	-0.3429	No
101	KRTCAP2	1417058_a_at 1417059_at	14729	-0.313	-0.3651	No
102	PPAP2B	1429514_at 1446850_at 1448908_at	14852	-0.339	-0.3696	No
103	ABR	1433477_at	14861	-0.340	-0.3689	No
104	EML4	1429612_at 1447838_x_at	14971	-0.362	-0.3727	No
105	ERBB2IP	1428011_a_at 1439079_a_at 1439080_at 1439638_at 1440573_at	15028	-0.374	-0.3741	No
106	MLLT7	1422149_at	15073	-0.380	-0.3749	No
107	HOXD10	1418606_at	15128	-0.391	-0.3761	No
108	PPP1R12A	1429487_at 1437734_at 1437735_at 1444762_at 1444834_at 1453163_at	15176	-0.400	-0.3770	No
109	CFL2	1418066_at 1418067_at 1431432_at	15248	-0.416	-0.3789	No
110	FOXE3	1422393_at	15305	-0.430	-0.3801	No
111	MRPS21	1422451_at	15528	-0.489	-0.3888	No
112	BNC2	1438861_at 1440593_at 1459132_at	15697	-0.534	-0.3948	No
113	TRIM46	1460568_at	15850	-0.566	-0.3999	No
114	SVIL	1427662_at 1460694_s_at 1460735_at	15863	-0.568	-0.3987	No
115	EGR3	1421486_at 1436329_at	15964	-0.593	-0.4014	No
116	TLE3	1419654_at 1419655_at 1449554_at 1458512_at	16179	-0.650	-0.4091	No
117	HOXC5	1439885_at 1450832_at 1456301_at	16222	-0.663	-0.4089	No
118	NR2F2	1416158_at 1416159_at 1416160_at 1431237_at 1444229_at	16303	-0.687	-0.4104	No
119	ABCA1	1421839_at 1421840_at 1450392_at	16331	-0.695	-0.4094	No
120	ITGB8	1436223_at	16396	-0.713	-0.4101	No
121	COL23A1	1429209_at 1429210_at 1440911_at	16459	-0.735	-0.4105	No
122	NRXN3	1419825_at 1431153_at 1432931_at 1433788_at 1438193_at 1439629_at 1442423_at 1444700_at 1456137_at 1460101_at	16532	-0.755	-0.4114	No
123	FGFRL1	1447878_s_at 1451912_a_at	16708	-0.811	-0.4169	No
124	FOXP2	1422014_at 1438231_at 1438232_at 1440108_at 1441365_at 1458191_at	16814	-0.846	-0.4190	No
125	ARPC4	1423588_at 1423589_at	16835	-0.852	-0.4172	No
126	MAP1A	1460566_at	17460	-1.048	-0.4425	No
127	THRAP1	1436904_at 1438725_at 1444068_at 1446840_at 1453160_at 1453161_at	17579	-1.097	-0.4444	No
128	GRK6	1437436_s_at 1450480_a_at 1451672_at	17587	-1.100	-0.4412	No
129	HOXB4	1451761_at 1460379_at	17605	-1.109	-0.4384	No
130	TGFB1I1	1418136_at	17709	-1.159	-0.4394	No
131	DGKG	1419756_at 1431167_at 1449584_at	17873	-1.224	-0.4430	No
132	LPP	1425673_at 1436714_at 1437235_x_at 1438271_at 1440167_s_at 1454899_at 1455314_at	17922	-1.244	-0.4412	No
133	CACNA1B	1425812_a_at 1436602_x_at 1439612_at 1460608_at	18141	-1.333	-0.4469	No
134	TPM3	1427260_a_at 1427567_a_at 1436958_x_at 1449996_a_at 1449997_at	18149	-1.337	-0.4430	No
135	MYO1E	1420159_at 1420160_s_at 1428509_at 1449753_at 1449941_at	18259	-1.393	-0.4435	No
136	MYLK	1425504_at 1425505_at 1425506_at	18283	-1.406	-0.4401	No
137	MYL6	1435041_at	18373	-1.448	-0.4395	No
138	KCNK3	1425341_at 1425342_a_at 1426058_a_at	18495	-1.512	-0.4402	No
139	BLOC1S1	1422614_s_at	18772	-1.654	-0.4476	No
140	MYADM	1423321_at 1439389_s_at	18869	-1.703	-0.4465	No
141	TAF5L	1448195_at	19353	-2.044	-0.4622	Yes
142	CASQ1	1422598_at	19471	-2.111	-0.4608	Yes
143	PRKAB2	1435874_at 1435875_at 1442001_at	19543	-2.156	-0.4571	Yes
144	MBNL1	1416904_at 1439686_at 1440315_at 1445106_at 1457924_at	19560	-2.171	-0.4509	Yes
145	SGK	1416041_at	19615	-2.209	-0.4463	Yes
146	CHD2	1444246_at 1445843_at	19671	-2.253	-0.4416	Yes
147	PFN1	1449018_at	19696	-2.277	-0.4354	Yes
148	CDC25B	1421963_a_at	19733	-2.313	-0.4296	Yes
149	PICALM	1441328_at 1443218_at 1446968_at 1451316_a_at 1455773_at	20195	-2.793	-0.4418	Yes
150	ACTA1	1427735_a_at	20245	-2.852	-0.4349	Yes
151	ACTB	1419734_at 1436722_a_at 1440365_at AFFX-b-ActinMur/M12481_3_at AFFX-b-ActinMur/M12481_5_at AFFX-b-ActinMur/M12481_M_at	20277	-2.880	-0.4271	Yes
152	ACTG2	1422340_a_at	20310	-2.918	-0.4192	Yes
153	JMJD1A	1426810_at	20442	-3.078	-0.4154	Yes
154	ARF6	1418822_a_at 1418823_at 1418824_at	20469	-3.111	-0.4066	Yes
155	UNC84B	1433832_at 1439238_at	20478	-3.124	-0.3969	Yes
156	H2AFX	1416746_at	20570	-3.284	-0.3906	Yes
157	LDB1	1452024_a_at	20583	-3.296	-0.3805	Yes
158	FOXP1	1421140_a_at 1421141_a_at 1421142_s_at 1435222_at 1438802_at 1443258_at 1446280_at 1447209_at 1455242_at 1456851_at	20692	-3.433	-0.3745	Yes
159	CSRP1	1425810_a_at 1425811_a_at	20752	-3.526	-0.3659	Yes
160	LRRFIP1	1433842_at 1437477_at 1448487_at	20927	-3.786	-0.3617	Yes
161	MAP2K6	1426850_a_at 1459292_at	20947	-3.821	-0.3503	Yes
162	CDKN1B	1419497_at 1434045_at	21001	-3.924	-0.3402	Yes
163	CNN2	1450981_at	21010	-3.935	-0.3279	Yes
164	MUS81	1431885_a_at 1450432_s_at	21039	-3.984	-0.3164	Yes
165	TAZ	1416207_at 1453785_at	21062	-4.056	-0.3044	Yes
166	FOS	1423100_at	21153	-4.275	-0.2948	Yes
167	PHF12	1434922_at 1453579_at	21235	-4.496	-0.2841	Yes
168	RUNDC1	1454829_at	21331	-4.737	-0.2733	Yes
169	STAT5B	1422102_a_at 1422103_a_at	21397	-4.949	-0.2604	Yes
170	RASSF2	1428392_at 1444889_at	21481	-5.310	-0.2471	Yes
171	RERE	1454670_at	21506	-5.419	-0.2309	Yes
172	VASP	1451097_at	21523	-5.491	-0.2140	Yes
173	JUNB	1415899_at	21600	-5.913	-0.1985	Yes
174	FLNA	1426677_at	21604	-5.948	-0.1795	Yes
175	PCDH7	1427592_at 1437442_at 1449249_at 1456214_at	21609	-5.972	-0.1605	Yes
176	IER2	1416442_at	21657	-6.231	-0.1427	Yes
177	DUSP5	1437199_at	21667	-6.307	-0.1229	Yes
178	KCNH2	1449544_a_at	21828	-8.622	-0.1026	Yes
179	EGR1	1417065_at	21855	-9.280	-0.0740	Yes
180	ANXA6	1415818_at 1429246_a_at 1429247_at 1442288_at	21906	-11.714	-0.0387	Yes
181	EGR2	1427682_a_at 1427683_at	21928	-12.431	0.0003	Yes