Details for gene set V$SRF

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$SRF_C
Enrichment Score (ES)	-0.43463424
Normalized Enrichment Score (NES)	-1.6764125
Nominal p-value	0.0014104373
FDR q-value	0.033435106
FWER p-Value	0.356

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	DSTN	1417124_at	215	5.188	0.0078	No
2	RBBP7	1415775_at 1456227_x_at	397	4.357	0.0143	No
3	TUFT1	1416689_at 1444694_at	639	3.681	0.0158	No
4	RSU1	1419259_at	872	3.244	0.0162	No
5	IGF2AS	1427394_at	1212	2.805	0.0101	No
6	CYR61	1416039_x_at 1417848_at 1417849_at 1438133_a_at 1442340_x_at 1457823_at 1459462_at	1266	2.750	0.0171	No
7	TANK	1421640_a_at 1441513_at 1459668_at	1645	2.397	0.0079	No
8	CTNND1	1422450_at 1437448_s_at 1445830_at	2028	2.140	-0.0024	No
9	NR2F1	1418157_at 1422412_x_at	2246	2.026	-0.0055	No
10	CKM	1417614_at	2272	2.014	0.0002	No
11	MATR3	1434888_a_at 1438368_a_at 1441272_at 1450874_at 1458508_at	2403	1.950	0.0009	No
12	ITGA7	1418393_a_at	2407	1.949	0.0074	No
13	SYNCRIP	1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at	2498	1.902	0.0098	No
14	FOSB	1422134_at	2565	1.874	0.0131	No
15	PDLIM7	1417959_at 1428319_at 1443785_x_at	2659	1.838	0.0151	No
16	SLC2A4	1415958_at 1415959_at	2738	1.810	0.0177	No
17	LCP1	1415983_at 1448160_at	2847	1.771	0.0187	No
18	ABL1	1423999_at 1441291_at 1444134_at 1445153_at	2923	1.744	0.0212	No
19	SLC7A1	1421533_at 1454991_at 1454992_at	2968	1.727	0.0251	No
20	GGN	1445278_at	3325	1.614	0.0142	No
21	STARD13	1452604_at	3400	1.590	0.0162	No
22	PDLIM4	1417928_at	3535	1.552	0.0154	No
23	EMILIN2	1435264_at	3620	1.522	0.0167	No
24	DEFB129	1440957_at	3692	1.503	0.0186	No
25	CRK	1416201_at 1425855_a_at 1436835_at 1448248_at 1460176_at	3707	1.501	0.0230	No
26	RASD2	1427343_at 1427344_s_at 1458433_at	4073	1.399	0.0110	No
27	VCL	1416156_at 1416157_at 1445256_at	4357	1.338	0.0026	No
28	KCTD15	1435339_at	4496	1.300	0.0007	No
29	MYL9	1452670_at	4523	1.296	0.0039	No
30	HERC1	1425378_at 1434060_at 1440437_at 1440903_at	5037	1.191	-0.0156	No
31	RHOJ	1418892_at 1444982_at	5109	1.181	-0.0149	No
32	HOXA5	1443803_x_at 1448926_at	5336	1.137	-0.0214	No
33	CALD1	1424768_at 1424769_s_at 1424770_at 1433146_at 1433147_at 1458057_at	5586	1.092	-0.0291	No
34	SRD5A2	1422960_at	5613	1.087	-0.0266	No
35	PLCB3	1448661_at	5728	1.067	-0.0282	No
36	EGR4	1449977_at	6157	1.002	-0.0445	No
37	HOXB5	1418415_at	6257	0.989	-0.0456	No
38	MEIS1	1440431_at 1443260_at 1445773_at 1450992_a_at 1459423_at 1459512_at	6317	0.979	-0.0450	No
39	CNN1	1417917_at	6328	0.977	-0.0421	No
40	FHL2	1419184_a_at	6383	0.968	-0.0413	No
41	LIN28	1437752_at	6538	0.947	-0.0452	No
42	MRVI1	1422245_a_at 1459665_s_at	6751	0.913	-0.0518	No
43	SCOC	1416267_at 1430999_a_at	6881	0.895	-0.0547	No
44	ROCK2	1423592_at 1451041_at	7312	0.824	-0.0716	No
45	NKX6-2	1427420_at	7408	0.809	-0.0732	No
46	MYL7	1449071_at	7920	0.736	-0.0942	No
47	ASPA	1418472_at	8004	0.724	-0.0956	No
48	DVL3	1420457_at	8252	0.685	-0.1046	No
49	AKAP12	1419706_a_at 1458235_at	8394	0.664	-0.1088	No
50	RAB30	1426452_a_at	8464	0.655	-0.1097	No
51	NPAS2	1421036_at 1421037_at	8496	0.649	-0.1090	No
52	NKX2-2	1421112_at	8544	0.641	-0.1089	No
53	ITGB6	1422983_at 1432281_a_at	8596	0.634	-0.1091	No
54	ITGB1BP2	1423238_at	8922	0.588	-0.1220	No
55	HOXA3	1427433_s_at 1441070_at 1452421_at	9440	0.513	-0.1440	No
56	COL8A1	1418440_at 1418441_at 1442794_at 1447819_x_at 1455627_at	9511	0.502	-0.1456	No
57	SRF	1418255_s_at 1418256_at	9517	0.501	-0.1441	No
58	YWHAZ	1416102_at 1416103_at 1436971_x_at 1436981_a_at 1439005_x_at 1443893_at 1448218_s_at 1448219_a_at	9754	0.468	-0.1533	No
59	ACTR3	1426392_a_at 1434968_a_at 1452051_at	9979	0.437	-0.1621	No
60	GADD45G	1453851_a_at	10051	0.428	-0.1639	No
61	DUSP10	1417163_at 1417164_at	10091	0.424	-0.1643	No
62	LMCD1	1424596_s_at	10193	0.412	-0.1675	No
63	AAK1	1420026_at 1435038_s_at 1441782_at	10500	0.367	-0.1803	No
64	ZFHX1B	1422748_at 1434298_at 1442393_at 1445518_at 1454200_at 1456389_at	10720	0.337	-0.1892	No
65	GPR20	1440021_at	10847	0.320	-0.1939	No
66	TAGLN	1423505_at	10992	0.301	-0.1995	No
67	ACTN1	1427385_s_at 1428585_at 1452415_at	11006	0.300	-0.1991	No
68	PLN	1423359_at 1450952_at 1460332_at	11065	0.292	-0.2008	No
69	PRM1	1415955_x_at 1437054_x_at 1439379_x_at	11067	0.292	-0.1998	No
70	CFL1	1448346_at 1455138_x_at	11139	0.280	-0.2021	No
71	COL1A2	1446326_at 1450857_a_at	11242	0.264	-0.2059	No
72	TNNC1	1418370_at	11289	0.257	-0.2072	No
73	IL17B	1431693_a_at	11390	0.242	-0.2109	No
74	PNKP	1416378_at	11467	0.230	-0.2136	No
75	EFHD1	1448507_at	11652	0.204	-0.2214	No
76	SLC25A4	1424562_a_at 1424563_at 1434897_a_at 1455069_x_at	11802	0.182	-0.2276	No
77	ASB2	1428444_at 1436259_at	11839	0.176	-0.2287	No
78	JPH2	1421453_at 1455404_at	11942	0.160	-0.2328	No
79	ELAVL4	1428741_at 1450258_a_at 1452894_at 1457399_at	12201	0.120	-0.2443	No
80	AOC3	1449396_at	12234	0.114	-0.2454	No
81	PPP2R3A	1455198_a_at	12283	0.108	-0.2472	No
82	MYO18B	1431813_at	12435	0.087	-0.2538	No
83	MYH11	1418122_at 1448962_at	12555	0.069	-0.2591	No
84	TADA3L	1417467_a_at 1448719_at	12851	0.026	-0.2725	No
85	CA3	1430584_s_at 1449434_at 1453588_at 1460256_at	13075	-0.015	-0.2827	No
86	RNF39	1440912_at 1441793_at	13274	-0.049	-0.2917	No
87	MITF	1422025_at 1455214_at	13369	-0.065	-0.2958	No
88	DIXDC1	1425256_a_at 1435207_at 1443957_at 1444395_at	13602	-0.103	-0.3061	No
89	FOSL1	1417487_at 1417488_at	13667	-0.117	-0.3086	No
90	DLL1	1419204_at	13684	-0.122	-0.3089	No
91	MAPK14	1416703_at 1416704_at 1426104_at 1442364_at 1451927_a_at 1459617_at	13846	-0.151	-0.3158	No
92	KCNMB1	1421400_at 1421401_at	14065	-0.189	-0.3252	No
93	MRGPRF	1425894_at	14123	-0.200	-0.3271	No
94	OSM	1438767_at	14344	-0.243	-0.3364	No
95	GFPT2	1418753_at	14375	-0.247	-0.3369	No
96	POPDC2	1417806_at	14447	-0.261	-0.3393	No
97	KRTCAP2	1417058_a_at 1417059_at	14729	-0.313	-0.3512	No
98	TITF1	1422346_at	14890	-0.346	-0.3573	No
99	EML4	1429612_at 1447838_x_at	14971	-0.362	-0.3598	No
100	ERBB2IP	1428011_a_at 1439079_a_at 1439080_at 1439638_at 1440573_at	15028	-0.374	-0.3611	No
101	HOXD10	1418606_at	15128	-0.391	-0.3643	No
102	PPP1R12A	1429487_at 1437734_at 1437735_at 1444762_at 1444834_at 1453163_at	15176	-0.400	-0.3651	No
103	CFL2	1418066_at 1418067_at 1431432_at	15248	-0.416	-0.3669	No
104	FOXE3	1422393_at	15305	-0.430	-0.3680	No
105	TRIM46	1460568_at	15850	-0.566	-0.3911	No
106	EGR3	1421486_at 1436329_at	15964	-0.593	-0.3943	No
107	POU3F4	1422164_at 1422165_at	15994	-0.600	-0.3936	No
108	TLE3	1419654_at 1419655_at 1449554_at 1458512_at	16179	-0.650	-0.3998	No
109	TOP1	1423474_at 1438495_at 1457573_at 1459672_at	16190	-0.655	-0.3980	No
110	SPAG7	1433940_at	16265	-0.679	-0.3991	No
111	NR2F2	1416158_at 1416159_at 1416160_at 1431237_at 1444229_at	16303	-0.687	-0.3985	No
112	DMPK	1422989_a_at 1434944_at	16413	-0.719	-0.4010	No
113	LTBP1	1419786_at 1440678_at 1446232_at 1447547_at 1448870_at 1457852_at 1458739_at	16705	-0.811	-0.4117	No
114	FGFRL1	1447878_s_at 1451912_a_at	16708	-0.811	-0.4090	No
115	FOXP2	1422014_at 1438231_at 1438232_at 1440108_at 1441365_at 1458191_at	16814	-0.846	-0.4109	No
116	ARPC4	1423588_at 1423589_at	16835	-0.852	-0.4089	No
117	DNAJB4	1431734_a_at 1439524_at 1443611_at 1451177_at	17008	-0.904	-0.4138	No
118	RGS3	1425701_a_at 1427648_at 1449516_a_at 1454026_a_at	17409	-1.033	-0.4286	Yes
119	MAP1A	1460566_at	17460	-1.048	-0.4274	Yes
120	DAPK3	1423446_at 1456496_at	17556	-1.088	-0.4280	Yes
121	GRK6	1437436_s_at 1450480_a_at 1451672_at	17587	-1.100	-0.4256	Yes
122	HOXB4	1451761_at 1460379_at	17605	-1.109	-0.4227	Yes
123	TGFB1I1	1418136_at	17709	-1.159	-0.4234	Yes
124	SSH3	1447929_at	17736	-1.170	-0.4206	Yes
125	MYO1B	1427450_x_at 1441210_at 1447364_x_at 1448989_a_at 1448990_a_at 1458007_at 1459679_s_at	17792	-1.193	-0.4191	Yes
126	LPP	1425673_at 1436714_at 1437235_x_at 1438271_at 1440167_s_at 1454899_at 1455314_at	17922	-1.244	-0.4208	Yes
127	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	18076	-1.306	-0.4234	Yes
128	CACNA1B	1425812_a_at 1436602_x_at 1439612_at 1460608_at	18141	-1.333	-0.4218	Yes
129	TPM3	1427260_a_at 1427567_a_at 1436958_x_at 1449996_a_at 1449997_at	18149	-1.337	-0.4176	Yes
130	BCAS3	1423528_at 1428454_at 1457817_at 1458557_at	18157	-1.344	-0.4133	Yes
131	MYO1E	1420159_at 1420160_s_at 1428509_at 1449753_at 1449941_at	18259	-1.393	-0.4132	Yes
132	LDB3	1416752_at 1433783_at 1451999_at	18262	-1.394	-0.4085	Yes
133	MYLK	1425504_at 1425505_at 1425506_at	18283	-1.406	-0.4047	Yes
134	MYL6	1435041_at	18373	-1.448	-0.4038	Yes
135	TCF2	1421224_a_at 1441484_at 1451687_a_at	18476	-1.504	-0.4034	Yes
136	KCNK3	1425341_at 1425342_a_at 1426058_a_at	18495	-1.512	-0.3991	Yes
137	CDC14A	1436913_at 1443184_at 1446493_at 1459517_at	18822	-1.681	-0.4083	Yes
138	ACVR1	1416786_at 1416787_at 1448460_at 1457551_at	19243	-1.975	-0.4209	Yes
139	PRKAB2	1435874_at 1435875_at 1442001_at	19543	-2.156	-0.4273	Yes
140	MBNL1	1416904_at 1439686_at 1440315_at 1445106_at 1457924_at	19560	-2.171	-0.4206	Yes
141	PFN1	1449018_at	19696	-2.277	-0.4191	Yes
142	RRM1	1415878_at 1440073_at 1448127_at	19774	-2.353	-0.4146	Yes
143	MCAM	1416357_a_at	19820	-2.398	-0.4085	Yes
144	ARHGAP1	1424307_at 1451309_at	19996	-2.579	-0.4078	Yes
145	ACTA1	1427735_a_at	20245	-2.852	-0.4095	Yes
146	ACTB	1419734_at 1436722_a_at 1440365_at AFFX-b-ActinMur/M12481_3_at AFFX-b-ActinMur/M12481_5_at AFFX-b-ActinMur/M12481_M_at	20277	-2.880	-0.4011	Yes
147	ACTG2	1422340_a_at	20310	-2.918	-0.3926	Yes
148	UNC84B	1433832_at 1439238_at	20478	-3.124	-0.3896	Yes
149	FOXP1	1421140_a_at 1421141_a_at 1421142_s_at 1435222_at 1438802_at 1443258_at 1446280_at 1447209_at 1455242_at 1456851_at	20692	-3.433	-0.3877	Yes
150	CNN2	1450981_at	21010	-3.935	-0.3889	Yes
151	MUS81	1431885_a_at 1450432_s_at	21039	-3.984	-0.3766	Yes
152	TAZ	1416207_at 1453785_at	21062	-4.056	-0.3638	Yes
153	FOS	1423100_at	21153	-4.275	-0.3534	Yes
154	PHF12	1434922_at 1453579_at	21235	-4.496	-0.3418	Yes
155	RUNDC1	1454829_at	21331	-4.737	-0.3300	Yes
156	STAT5B	1422102_a_at 1422103_a_at	21397	-4.949	-0.3162	Yes
157	CAP1	1417461_at 1417462_at	21432	-5.083	-0.3004	Yes
158	RASSF2	1428392_at 1444889_at	21481	-5.310	-0.2845	Yes
159	DUSP6	1415834_at	21510	-5.447	-0.2673	Yes
160	USP52	1426700_a_at	21560	-5.702	-0.2501	Yes
161	SIPA1	1416206_at	21594	-5.880	-0.2316	Yes
162	JUNB	1415899_at	21600	-5.913	-0.2117	Yes
163	FLNA	1426677_at	21604	-5.948	-0.1916	Yes
164	IER2	1416442_at	21657	-6.231	-0.1727	Yes
165	DUSP5	1437199_at	21667	-6.307	-0.1517	Yes
166	DUSP2	1450698_at	21723	-6.910	-0.1307	Yes
167	NR4A1	1416505_at	21771	-7.733	-0.1065	Yes
168	EGR1	1417065_at	21855	-9.280	-0.0787	Yes
169	ANXA6	1415818_at 1429246_a_at 1429247_at 1442288_at	21906	-11.714	-0.0411	Yes
170	EGR2	1427682_a_at 1427683_at	21928	-12.431	0.0003	Yes