Details for gene set V$NFKB_Q6

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$NFKB_Q6_01
Enrichment Score (ES)	-0.4930682
Normalized Enrichment Score (NES)	-1.9272088
Nominal p-value	0.0
FDR q-value	0.004260696
FWER p-Value	0.01

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	ARHGAP8	1451463_at	720	3.525	-0.0214	No
2	COL27A1	1429549_at 1453191_at	803	3.364	-0.0141	No
3	ENO3	1417951_at 1449631_at	1208	2.809	-0.0234	No
4	UACA	1452985_at	1926	2.204	-0.0490	No
5	PCSK2	1428305_at 1444147_at 1447991_at 1447992_s_at 1448312_at	2036	2.136	-0.0470	No
6	IL2RA	1420691_at 1420692_at	2056	2.126	-0.0408	No
7	TCEA2	1418107_at 1440791_x_at	2297	2.003	-0.0453	No
8	PAPPA	1427633_a_at 1432591_at 1432592_at 1459375_at	2410	1.947	-0.0440	No
9	TGIF	1422286_a_at	2596	1.863	-0.0463	No
10	PTHLH	1422324_a_at 1427527_a_at	2996	1.720	-0.0590	No
11	XPO6	1422759_a_at 1440492_at 1443737_at	3064	1.694	-0.0565	No
12	BMP2K	1421103_at 1437419_at 1458370_at	3374	1.596	-0.0654	No
13	TRIB2	1426640_s_at 1426641_at 1459852_x_at	3549	1.546	-0.0683	No
14	EDG5	1428176_at 1447880_x_at	3562	1.540	-0.0637	No
15	TRAF4	1416571_at 1460642_at	3572	1.536	-0.0591	No
16	SEMA3B	1416644_a_at 1431795_a_at 1448415_a_at	3581	1.533	-0.0544	No
17	UBE2D3	1423112_at 1423113_a_at 1423114_at 1450858_a_at 1450859_s_at 1455479_a_at 1455480_s_at	3607	1.527	-0.0505	No
18	DGKI	1439986_at 1442813_at	3712	1.500	-0.0503	No
19	FGF17	1421523_at 1456239_at	3817	1.471	-0.0502	No
20	SEC61A1	1416189_a_at 1416190_a_at 1416191_at 1434986_a_at 1448242_at 1455987_at	4006	1.419	-0.0542	No
21	ZIC4	1421539_at 1456417_at	4017	1.416	-0.0500	No
22	EIF5A	1437859_x_at 1451470_s_at	4206	1.370	-0.0541	No
23	HTR3B	1421652_at	4326	1.346	-0.0551	No
24	SMPD3	1422779_at 1438665_at 1445759_at 1450748_at	4355	1.338	-0.0520	No
25	BLR1	1422003_at	4434	1.316	-0.0512	No
26	CSF3	1419427_at	4491	1.302	-0.0495	No
27	PCBP4	1433658_x_at 1449054_a_at 1449055_x_at	4662	1.263	-0.0531	No
28	NEK8	1450337_a_at 1458157_at	4709	1.254	-0.0511	No
29	IFNB1	1422305_at	4823	1.233	-0.0522	No
30	CLCN1	1427591_at 1448082_at	5240	1.155	-0.0675	No
31	SP6	1427786_at 1427787_at 1437788_at 1442342_at	5273	1.148	-0.0652	No
32	FUT7	1420756_at	5328	1.139	-0.0639	No
33	GREM1	1425357_a_at	5397	1.127	-0.0633	No
34	CNTNAP1	1421580_at	5982	1.029	-0.0867	No
35	IGSF4	1417376_a_at 1417377_at 1417378_at 1431611_a_at	6125	1.006	-0.0899	No
36	TRIM47	1426784_at	6192	0.999	-0.0897	No
37	IL13	1420802_at	6196	0.998	-0.0865	No
38	DDR1	1415797_at 1415798_at 1435820_x_at 1437619_x_at 1438367_x_at 1439382_x_at 1456226_x_at 1459990_at	6425	0.963	-0.0938	No
39	UBE2H	1418631_at 1418632_at 1428791_at 1438971_x_at 1447374_at 1459930_at	6583	0.940	-0.0979	No
40	BAZ2B	1435240_at 1440984_at 1441556_at 1442704_at 1442971_at 1445048_at 1448007_at 1458077_at	6635	0.930	-0.0972	No
41	MSC	1418417_at	6753	0.913	-0.0995	No
42	PTPRJ	1425587_a_at 1425588_at 1427602_at 1427629_at 1443683_at 1455030_at	6762	0.911	-0.0969	No
43	IL12A	1425454_a_at	6905	0.891	-0.1005	No
44	NDRG2	1448154_at	7101	0.859	-0.1066	No
45	GRK5	1446361_at 1446998_at 1449514_at	7153	0.851	-0.1061	No
46	TP53	1426538_a_at 1427739_a_at 1438808_at 1457623_x_at 1459780_at 1459781_x_at	7499	0.796	-0.1194	No
47	SLC6A12	1449382_at	8021	0.722	-0.1409	No
48	KRTAP13-1	1428007_at	8114	0.709	-0.1428	No
49	RBPSUH	1418114_at 1438848_at 1446436_at 1448957_at 1454896_at	8303	0.677	-0.1492	No
50	TCF1	1421234_at	8349	0.671	-0.1491	No
51	ELMO1	1424523_at 1446610_at 1450208_a_at	8498	0.649	-0.1537	No
52	TSLP	1450004_at	8554	0.639	-0.1541	No
53	ASCL3	1420780_at	8574	0.637	-0.1529	No
54	ARHGEF2	1421042_at 1421043_s_at 1427646_a_at	8589	0.635	-0.1514	No
55	ETV1	1422607_at 1445314_at 1450684_at	8590	0.635	-0.1493	No
56	MSX1	1417127_at 1448601_s_at	8600	0.634	-0.1477	No
57	BAI2	1435558_at	8904	0.590	-0.1596	No
58	GRIN2D	1421393_at	9066	0.567	-0.1652	No
59	NFKBIB	1421266_s_at 1446718_at	9147	0.553	-0.1670	No
60	FGF1	1423136_at 1441042_at 1450869_at	9331	0.527	-0.1737	No
61	BCL6B	1418421_at	9540	0.498	-0.1816	No
62	BMF	1422995_at 1454880_s_at 1458325_x_at	9568	0.494	-0.1812	No
63	IL1RN	1423017_a_at 1425663_at 1451798_at	9632	0.486	-0.1825	No
64	EDN2	1449161_at	10084	0.425	-0.2018	No
65	SHOX2	1420559_a_at 1438042_at	10176	0.414	-0.2046	No
66	EGF	1418093_a_at	10299	0.397	-0.2089	No
67	NFKBIA	1420088_at 1420089_at 1438157_s_at 1448306_at 1449731_s_at	10443	0.375	-0.2142	No
68	POU2F3	1450507_at	10727	0.336	-0.2261	No
69	IL7	1422080_at 1436861_at	10729	0.336	-0.2251	No
70	EHF	1419474_a_at 1419475_a_at 1447760_x_at 1451375_at	10798	0.327	-0.2271	No
71	ACTN1	1427385_s_at 1428585_at 1452415_at	11006	0.300	-0.2356	No
72	CHD4	1436343_at 1438476_a_at 1451295_a_at	11358	0.246	-0.2510	No
73	WNT10A	1460657_at	11392	0.241	-0.2517	No
74	PHOX2B	1422232_at 1455907_x_at	11771	0.187	-0.2684	No
75	MRPS6	1424440_at 1447585_s_at	11772	0.187	-0.2678	No
76	GPHN	1426462_at 1426463_at 1430038_at 1444869_at 1445188_at 1458242_at	12048	0.144	-0.2800	No
77	C1QL1	1422777_at	12329	0.101	-0.2925	No
78	KLK9	1431681_at	12369	0.096	-0.2940	No
79	UPF2	1435030_at 1445777_at	12478	0.080	-0.2987	No
80	SOX5	1423500_a_at 1432189_a_at 1432190_at 1440827_x_at 1446461_at 1452511_at 1459261_at	12645	0.057	-0.3061	No
81	TBX20	1422219_a_at 1425158_at 1453351_at	12651	0.056	-0.3062	No
82	RBMS1	1418703_at 1434005_at 1441437_at 1458578_at 1459968_at	13062	-0.014	-0.3250	No
83	CENTB5	1439021_at	13209	-0.038	-0.3315	No
84	EBI3	1449222_at	13342	-0.061	-0.3374	No
85	MITF	1422025_at 1455214_at	13369	-0.065	-0.3384	No
86	HSD3B7	1416968_a_at 1442912_at	13648	-0.112	-0.3508	No
87	ALG6	1439007_at 1459337_at	13848	-0.151	-0.3594	No
88	ZBTB11	1454826_at	14030	-0.184	-0.3671	No
89	UBE2I	1422712_a_at 1422713_a_at 1425478_x_at 1453189_at	14112	-0.198	-0.3702	No
90	REV3L	1424632_a_at 1426194_x_at 1451960_a_at	14271	-0.227	-0.3767	No
91	MAML2	1446570_at 1447546_s_at	14534	-0.276	-0.3878	No
92	DCAMKL1	1423125_at 1424270_at 1424271_at 1436659_at 1446190_at 1450863_a_at 1451289_at 1451917_a_at	14776	-0.324	-0.3978	No
93	IL23A	1419529_at	15040	-0.376	-0.4087	No
94	PTGES	1439747_at 1449449_at 1449450_at	15149	-0.395	-0.4123	No
95	RALGDS	1460634_at	15165	-0.398	-0.4117	No
96	MADCAM1	1425253_a_at	15562	-0.500	-0.4283	No
97	ZNRF1	1420949_at 1420950_at 1424384_a_at	15674	-0.527	-0.4316	No
98	DAP3	1450848_at	15675	-0.528	-0.4299	No
99	SNAP25	1416828_at 1443398_at	15752	-0.547	-0.4316	No
100	DUSP22	1441723_at 1448985_at	15933	-0.584	-0.4379	No
101	ANKHD1	1419867_a_at 1436597_at 1440754_at 1441597_at 1442641_at 1448008_at 1453023_at 1455759_a_at	16176	-0.649	-0.4469	No
102	TOP1	1423474_at 1438495_at 1457573_at 1459672_at	16190	-0.655	-0.4453	No
103	UBD	1419762_at	16275	-0.681	-0.4469	No
104	NR2F2	1416158_at 1416159_at 1416160_at 1431237_at 1444229_at	16303	-0.687	-0.4459	No
105	RND1	1455197_at	16347	-0.700	-0.4456	No
106	RIN2	1426368_at 1441209_at 1442829_at	16421	-0.721	-0.4465	No
107	NFAT5	1426029_a_at 1438999_a_at 1439328_at 1439805_at 1448966_a_at 1451921_a_at 1458213_at	16651	-0.796	-0.4544	No
108	CREB1	1421582_a_at 1421583_at 1423402_at 1428755_at 1452529_a_at 1452901_at	16793	-0.840	-0.4581	No
109	MOBKL2C	1440919_at 1459919_a_at	16853	-0.856	-0.4580	No
110	RASGRP4	1425380_at	16928	-0.879	-0.4585	No
111	PRKCD	1422847_a_at 1442256_at	16936	-0.882	-0.4559	No
112	NR3C1	1421866_at 1421867_at 1453860_s_at 1457635_s_at 1460303_at	17087	-0.932	-0.4597	No
113	MAG	1460219_at	17271	-0.989	-0.4649	No
114	JAK3	1425750_a_at 1446515_at	17349	-1.014	-0.4651	No
115	CYLD	1429617_at 1429618_at 1445213_at	17466	-1.050	-0.4669	No
116	ERN1	1421240_at 1431886_at 1437119_at 1438583_at 1438997_at 1450176_at	17530	-1.076	-0.4663	No
117	TNFSF7	1449926_at	17561	-1.090	-0.4640	No
118	VCAM1	1415989_at 1436003_at 1448162_at 1451314_a_at	17633	-1.118	-0.4636	No
119	BIRC3	1421392_a_at 1425223_at	17639	-1.121	-0.4601	No
120	IER5	1417612_at 1417613_at	17981	-1.269	-0.4716	No
121	ATP1B1	1418453_a_at 1423890_x_at 1439036_a_at 1451152_a_at 1455949_at	18105	-1.314	-0.4729	No
122	GATA4	1418863_at 1418864_at 1441364_at	18416	-1.471	-0.4823	No
123	GNB1	1417432_a_at 1425908_at 1454696_at 1459442_at	18610	-1.556	-0.4860	No
124	NLK	1419112_at 1435970_at 1443279_at 1445427_at 1456467_s_at	18764	-1.649	-0.4876	Yes
125	AMOTL1	1428785_at 1431121_at 1446909_at 1455247_at	18808	-1.672	-0.4841	Yes
126	PPP1R13B	1434895_s_at 1442956_at 1459224_at	18826	-1.682	-0.4793	Yes
127	STAT6	1421708_a_at 1426353_at	18962	-1.762	-0.4797	Yes
128	RHOG	1422572_at	19155	-1.907	-0.4822	Yes
129	SLAMF8	1425294_at	19158	-1.908	-0.4760	Yes
130	SIRT2	1423507_a_at	19236	-1.972	-0.4730	Yes
131	GNG4	1417943_at 1417944_at 1447669_s_at	19246	-1.976	-0.4669	Yes
132	TNFRSF1B	1418099_at 1448951_at	19320	-2.022	-0.4636	Yes
133	SIN3A	1419101_at 1419102_at 1419900_at 1449343_s_at	19580	-2.185	-0.4683	Yes
134	BATF	1419410_at	19617	-2.210	-0.4626	Yes
135	TNFRSF9	1421481_at 1428034_a_at 1460469_at	19645	-2.239	-0.4565	Yes
136	PFN1	1449018_at	19696	-2.277	-0.4512	Yes
137	RAP2C	1428119_a_at 1437016_x_at 1460430_at	19804	-2.383	-0.4483	Yes
138	IL4I1	1419192_at	19954	-2.535	-0.4468	Yes
139	SOCS2	1418507_s_at 1438470_at 1441476_at 1442586_at 1446085_at 1449109_at	20296	-2.903	-0.4528	Yes
140	NFKB2	1425902_a_at 1429128_x_at	20307	-2.917	-0.4437	Yes
141	ASH1L	1420985_at 1441117_at 1450071_at 1450072_at	20423	-3.057	-0.4389	Yes
142	CHD6	1427384_at 1431047_at	20438	-3.075	-0.4293	Yes
143	MMP9	1416298_at 1448291_at	20464	-3.107	-0.4202	Yes
144	ILK	1449942_a_at	20466	-3.107	-0.4100	Yes
145	UNC84B	1433832_at 1439238_at	20478	-3.124	-0.4002	Yes
146	EP300	1434765_at	20519	-3.188	-0.3915	Yes
147	BCL3	1418133_at	20646	-3.380	-0.3861	Yes
148	AP1S2	1437998_at 1447903_x_at 1452657_at 1456252_x_at 1460036_at	20662	-3.392	-0.3756	Yes
149	LTA	1420353_at	20698	-3.438	-0.3659	Yes
150	NTN1	1422987_at 1454974_at	20710	-3.458	-0.3550	Yes
151	ICAM1	1424067_at	20776	-3.566	-0.3462	Yes
152	BDNF	1422168_a_at 1422169_a_at	20807	-3.621	-0.3356	Yes
153	MAP3K11	1450669_at	20827	-3.653	-0.3244	Yes
154	MAP4K2	1428297_at 1434833_at 1450244_a_at	20871	-3.716	-0.3141	Yes
155	RFX5	1423103_at	21043	-3.988	-0.3088	Yes
156	GADD45B	1420197_at 1449773_s_at 1450971_at	21323	-4.709	-0.3061	Yes
157	RASSF2	1428392_at 1444889_at	21481	-5.310	-0.2957	Yes
158	DUSP6	1415834_at	21510	-5.447	-0.2790	Yes
159	IL27RA	1449508_at	21556	-5.694	-0.2623	Yes
160	USP52	1426700_a_at	21560	-5.702	-0.2436	Yes
161	CD69	1428735_at	21580	-5.830	-0.2252	Yes
162	IL6ST	1421239_at 1437303_at 1452843_at 1460295_s_at	21633	-6.090	-0.2075	Yes
163	TNIP1	1427689_a_at	21690	-6.558	-0.1884	Yes
164	RELB	1417856_at	21755	-7.349	-0.1671	Yes
165	HIVEP1	1422742_at	21776	-7.798	-0.1422	Yes
166	ZBTB9	1429125_at	21783	-7.885	-0.1165	Yes
167	LTB	1419135_at	21784	-7.914	-0.0903	Yes
168	CCL5	1418126_at	21821	-8.504	-0.0639	Yes
169	SMOC1	1448321_at	21857	-9.327	-0.0347	Yes
170	FBXL12	1448420_a_at	21901	-11.567	0.0015	Yes