Details for gene set V$NFKAPPAB

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$NFKAPPAB_01
Enrichment Score (ES)	-0.47309357
Normalized Enrichment Score (NES)	-1.865391
Nominal p-value	0.0
FDR q-value	0.0066355267
FWER p-Value	0.026

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SLC11A2	1417584_at 1426441_at 1441709_at 1447333_at 1452078_a_at	434	4.223	-0.0071	No
2	BFSP1	1450571_a_at	478	4.103	0.0033	No
3	SDC4	1417654_at 1448793_a_at	622	3.699	0.0080	No
4	ARHGAP8	1451463_at	720	3.525	0.0142	No
5	LIG1	1416641_at	927	3.145	0.0143	No
6	ENO3	1417951_at 1449631_at	1208	2.809	0.0100	No
7	PRX	1423292_a_at	1670	2.380	-0.0040	No
8	UACA	1452985_at	1926	2.204	-0.0090	No
9	PCSK2	1428305_at 1444147_at 1447991_at 1447992_s_at 1448312_at	2036	2.136	-0.0075	No
10	IL2RA	1420691_at 1420692_at	2056	2.126	-0.0020	No
11	TCEA2	1418107_at 1440791_x_at	2297	2.003	-0.0069	No
12	ZFP36L2	1437626_at 1439054_at 1451034_at	2405	1.950	-0.0059	No
13	ACTN3	1418677_at	2487	1.909	-0.0038	No
14	ARHGAP5	1423194_at 1450896_at 1450897_at 1457410_at	3170	1.658	-0.0302	No
15	SEC14L2	1424530_at	3176	1.658	-0.0254	No
16	BMP2K	1421103_at 1437419_at 1458370_at	3374	1.596	-0.0296	No
17	TRIB2	1426640_s_at 1426641_at 1459852_x_at	3549	1.546	-0.0329	No
18	EDG5	1428176_at 1447880_x_at	3562	1.540	-0.0288	No
19	TRAF4	1416571_at 1460642_at	3572	1.536	-0.0245	No
20	UBE2D3	1423112_at 1423113_a_at 1423114_at 1450858_a_at 1450859_s_at 1455479_a_at 1455480_s_at	3607	1.527	-0.0214	No
21	FGF17	1421523_at 1456239_at	3817	1.471	-0.0266	No
22	EIF5A	1437859_x_at 1451470_s_at	4206	1.370	-0.0403	No
23	SMPD3	1422779_at 1438665_at 1445759_at 1450748_at	4355	1.338	-0.0430	No
24	BLR1	1422003_at	4434	1.316	-0.0426	No
25	WNT10B	1426091_a_at	4498	1.300	-0.0415	No
26	PCBP4	1433658_x_at 1449054_a_at 1449055_x_at	4662	1.263	-0.0452	No
27	IFNB1	1422305_at	4823	1.233	-0.0488	No
28	CTGF	1416953_at	5024	1.194	-0.0544	No
29	CDK6	1435338_at 1440040_at 1455287_at 1460291_at	5235	1.156	-0.0605	No
30	CLCN1	1427591_at 1448082_at	5240	1.155	-0.0572	No
31	SP6	1427786_at 1427787_at 1437788_at 1442342_at	5273	1.148	-0.0552	No
32	CXCL2	1449984_at	5274	1.148	-0.0517	No
33	FUT7	1420756_at	5328	1.139	-0.0507	No
34	GREM1	1425357_a_at	5397	1.127	-0.0504	No
35	PLAU	1422138_at 1422139_at	5689	1.077	-0.0605	No
36	ATOH1	1449822_at	5884	1.044	-0.0663	No
37	RIMS2	1422809_at 1432102_at 1436470_at 1443215_at 1450761_s_at	5997	1.026	-0.0683	No
38	KCNN3	1421632_at 1459308_at	6182	1.000	-0.0737	No
39	TRIM47	1426784_at	6192	0.999	-0.0711	No
40	IL13	1420802_at	6196	0.998	-0.0682	No
41	DDR1	1415797_at 1415798_at 1435820_x_at 1437619_x_at 1438367_x_at 1439382_x_at 1456226_x_at 1459990_at	6425	0.963	-0.0758	No
42	OPCML	1435612_at 1442752_at 1457446_at 1458228_at	6573	0.942	-0.0797	No
43	UBE2H	1418631_at 1418632_at 1428791_at 1438971_x_at 1447374_at 1459930_at	6583	0.940	-0.0772	No
44	MSC	1418417_at	6753	0.913	-0.0822	No
45	SAMSN1	1421457_a_at 1431539_at	7081	0.862	-0.0946	No
46	GRK5	1446361_at 1446998_at 1449514_at	7153	0.851	-0.0953	No
47	RRAS	1418448_at	7455	0.802	-0.1067	No
48	TP53	1426538_a_at 1427739_a_at 1438808_at 1457623_x_at 1459780_at 1459781_x_at	7499	0.796	-0.1063	No
49	TLX1	1450526_at	7671	0.771	-0.1118	No
50	NOL4	1430189_at 1441447_at 1456387_at	7928	0.736	-0.1213	No
51	STC2	1419503_at 1445186_at 1449484_at	7949	0.733	-0.1200	No
52	HOXB9	1452317_at	7957	0.732	-0.1181	No
53	SLC6A12	1449382_at	8021	0.722	-0.1188	No
54	KRTAP13-1	1428007_at	8114	0.709	-0.1209	No
55	COL11A2	1423578_at	8212	0.692	-0.1233	No
56	BCKDK	1443813_x_at 1460644_at	8367	0.668	-0.1283	No
57	TSLP	1450004_at	8554	0.639	-0.1349	No
58	ASCL3	1420780_at	8574	0.637	-0.1339	No
59	MSX1	1417127_at 1448601_s_at	8600	0.634	-0.1331	No
60	BAI2	1435558_at	8904	0.590	-0.1453	No
61	GRIN2D	1421393_at	9066	0.567	-0.1509	No
62	NFKBIB	1421266_s_at 1446718_at	9147	0.553	-0.1529	No
63	CHX10	1419628_at	9167	0.551	-0.1521	No
64	HOXA11	1420414_at	9258	0.537	-0.1546	No
65	CXCL5	1419728_at	9322	0.529	-0.1559	No
66	FLRT1	1443143_at	9324	0.528	-0.1544	No
67	FGF1	1423136_at 1441042_at 1450869_at	9331	0.527	-0.1530	No
68	CXCL9	1418652_at 1456907_at	9443	0.512	-0.1566	No
69	TNF	1419607_at	9533	0.499	-0.1592	No
70	BCL6B	1418421_at	9540	0.498	-0.1579	No
71	BMF	1422995_at 1454880_s_at 1458325_x_at	9568	0.494	-0.1577	No
72	IL1RN	1423017_a_at 1425663_at 1451798_at	9632	0.486	-0.1591	No
73	EDN2	1449161_at	10084	0.425	-0.1785	No
74	SHOX2	1420559_a_at 1438042_at	10176	0.414	-0.1815	No
75	EGF	1418093_a_at	10299	0.397	-0.1859	No
76	FKHL18	1437820_at	10429	0.378	-0.1907	No
77	IL1A	1421473_at	10486	0.369	-0.1921	No
78	ETV6	1423401_at 1434880_at 1444598_at 1457944_at	10774	0.329	-0.2043	No
79	EHF	1419474_a_at 1419475_a_at 1447760_x_at 1451375_at	10798	0.327	-0.2044	No
80	ACTN1	1427385_s_at 1428585_at 1452415_at	11006	0.300	-0.2130	No
81	CHD4	1436343_at 1438476_a_at 1451295_a_at	11358	0.246	-0.2284	No
82	WNT10A	1460657_at	11392	0.241	-0.2292	No
83	SALL1	1450489_at	11540	0.221	-0.2353	No
84	GPHN	1426462_at 1426463_at 1430038_at 1444869_at 1445188_at 1458242_at	12048	0.144	-0.2581	No
85	COL16A1	1427986_a_at	12069	0.140	-0.2586	No
86	KCNS3	1445519_at 1457799_at	12145	0.129	-0.2617	No
87	AGC1	1449827_at	12243	0.113	-0.2658	No
88	C1QL1	1422777_at	12329	0.101	-0.2694	No
89	KLK9	1431681_at	12369	0.096	-0.2709	No
90	SOX5	1423500_a_at 1432189_a_at 1432190_at 1440827_x_at 1446461_at 1452511_at 1459261_at	12645	0.057	-0.2834	No
91	IL1RAPL1	1445821_at 1458964_at	12936	0.010	-0.2967	No
92	SESN2	1425139_at 1451599_at	12939	0.009	-0.2968	No
93	RBMS1	1418703_at 1434005_at 1441437_at 1458578_at 1459968_at	13062	-0.014	-0.3023	No
94	PUNC	1423496_a_at 1439498_at 1444981_at	13097	-0.019	-0.3038	No
95	LAMA1	1418153_at	13125	-0.024	-0.3050	No
96	EBI3	1449222_at	13342	-0.061	-0.3147	No
97	HSD3B7	1416968_a_at 1442912_at	13648	-0.112	-0.3284	No
98	ALG6	1439007_at 1459337_at	13848	-0.151	-0.3371	No
99	ZBTB11	1454826_at	14030	-0.184	-0.3449	No
100	UBE2I	1422712_a_at 1422713_a_at 1425478_x_at 1453189_at	14112	-0.198	-0.3480	No
101	HCST	1419119_at	14493	-0.269	-0.3647	No
102	MAML2	1446570_at 1447546_s_at	14534	-0.276	-0.3657	No
103	C1ORF24	1422567_at 1454942_at	14661	-0.300	-0.3706	No
104	DCAMKL1	1423125_at 1424270_at 1424271_at 1436659_at 1446190_at 1450863_a_at 1451289_at 1451917_a_at	14776	-0.324	-0.3748	No
105	CXCL11	1419697_at 1419698_at	14844	-0.338	-0.3769	No
106	IL23A	1419529_at	15040	-0.376	-0.3847	No
107	RALGDS	1460634_at	15165	-0.398	-0.3892	No
108	SLC12A2	1417622_at 1417623_at 1443332_at 1448780_at	15539	-0.492	-0.4048	No
109	MADCAM1	1425253_a_at	15562	-0.500	-0.4043	No
110	DAP3	1450848_at	15675	-0.528	-0.4079	No
111	BNC2	1438861_at 1440593_at 1459132_at	15697	-0.534	-0.4072	No
112	GNAO1	1421152_a_at 1448031_at 1460383_at	15698	-0.534	-0.4056	No
113	PPARBP	1421906_at 1421907_at 1439408_a_at 1446250_at 1447450_at 1448708_at 1450402_at 1453972_x_at	15963	-0.592	-0.4160	No
114	UBD	1419762_at	16275	-0.681	-0.4282	No
115	NR2F2	1416158_at 1416159_at 1416160_at 1431237_at 1444229_at	16303	-0.687	-0.4273	No
116	RND1	1455197_at	16347	-0.700	-0.4272	No
117	TAL1	1449389_at	16388	-0.712	-0.4269	No
118	JARID2	1422698_s_at 1446082_at 1450710_at 1456661_at	16392	-0.713	-0.4248	No
119	RIN2	1426368_at 1441209_at 1442829_at	16421	-0.721	-0.4239	No
120	CXCL10	1418930_at	16482	-0.740	-0.4245	No
121	ITGB4	1427387_a_at	16485	-0.741	-0.4223	No
122	NFAT5	1426029_a_at 1438999_a_at 1439328_at 1439805_at 1448966_a_at 1451921_a_at 1458213_at	16651	-0.796	-0.4275	No
123	CREB1	1421582_a_at 1421583_at 1423402_at 1428755_at 1452529_a_at 1452901_at	16793	-0.840	-0.4314	No
124	MOBKL2C	1440919_at 1459919_a_at	16853	-0.856	-0.4315	No
125	SOX10	1424985_a_at 1425369_a_at 1451689_a_at	17054	-0.921	-0.4379	No
126	MAG	1460219_at	17271	-0.989	-0.4448	No
127	JAK3	1425750_a_at 1446515_at	17349	-1.014	-0.4453	No
128	MAP3K8	1419208_at	17444	-1.043	-0.4465	No
129	CYLD	1429617_at 1429618_at 1445213_at	17466	-1.050	-0.4442	No
130	ERN1	1421240_at 1431886_at 1437119_at 1438583_at 1438997_at 1450176_at	17530	-1.076	-0.4439	No
131	TNFSF7	1449926_at	17561	-1.090	-0.4419	No
132	VCAM1	1415989_at 1436003_at 1448162_at 1451314_a_at	17633	-1.118	-0.4418	No
133	BIRC3	1421392_a_at 1425223_at	17639	-1.121	-0.4386	No
134	IER5	1417612_at 1417613_at	17981	-1.269	-0.4505	No
135	ATP1B1	1418453_a_at 1423890_x_at 1439036_a_at 1451152_a_at 1455949_at	18105	-1.314	-0.4521	No
136	GATA4	1418863_at 1418864_at 1441364_at	18416	-1.471	-0.4619	No
137	GNB1	1417432_a_at 1425908_at 1454696_at 1459442_at	18610	-1.556	-0.4661	No
138	NLK	1419112_at 1435970_at 1443279_at 1445427_at 1456467_s_at	18764	-1.649	-0.4681	Yes
139	CDC14A	1436913_at 1443184_at 1446493_at 1459517_at	18822	-1.681	-0.4656	Yes
140	CPD	1418018_at 1418019_at 1418020_s_at 1434547_at 1442212_at 1447392_s_at 1455009_at	18943	-1.753	-0.4658	Yes
141	STAT6	1421708_a_at 1426353_at	18962	-1.762	-0.4613	Yes
142	CXCL16	1418718_at 1449195_s_at	19061	-1.833	-0.4602	Yes
143	SLAMF8	1425294_at	19158	-1.908	-0.4588	Yes
144	GNG4	1417943_at 1417944_at 1447669_s_at	19246	-1.976	-0.4568	Yes
145	P2RY10	1452815_at	19285	-1.998	-0.4525	Yes
146	TNFRSF1B	1418099_at 1448951_at	19320	-2.022	-0.4479	Yes
147	MSN	1421814_at 1450379_at	19445	-2.096	-0.4473	Yes
148	SIN3A	1419101_at 1419102_at 1419900_at 1449343_s_at	19580	-2.185	-0.4468	Yes
149	TNFRSF9	1421481_at 1428034_a_at 1460469_at	19645	-2.239	-0.4429	Yes
150	ZMYND15	1438498_at	19673	-2.256	-0.4373	Yes
151	PFN1	1449018_at	19696	-2.277	-0.4314	Yes
152	RPS6KA4	1438243_at 1448498_at	19778	-2.357	-0.4280	Yes
153	RAP2C	1428119_a_at 1437016_x_at 1460430_at	19804	-2.383	-0.4219	Yes
154	IL4I1	1419192_at	19954	-2.535	-0.4211	Yes
155	AGPAT1	1421024_at 1421025_at	20286	-2.887	-0.4275	Yes
156	NFKB2	1425902_a_at 1429128_x_at	20307	-2.917	-0.4196	Yes
157	UBE4B	1432499_a_at 1444465_at 1448410_at	20359	-2.986	-0.4129	Yes
158	ASH1L	1420985_at 1441117_at 1450071_at 1450072_at	20423	-3.057	-0.4065	Yes
159	CHD6	1427384_at 1431047_at	20438	-3.075	-0.3978	Yes
160	MMP9	1416298_at 1448291_at	20464	-3.107	-0.3895	Yes
161	UNC84B	1433832_at 1439238_at	20478	-3.124	-0.3806	Yes
162	IRF1	1448436_a_at	20504	-3.165	-0.3721	Yes
163	LRCH1	1438032_at 1442502_at 1442757_at 1445396_at 1447746_at 1459150_at	20578	-3.292	-0.3655	Yes
164	BCL3	1418133_at	20646	-3.380	-0.3583	Yes
165	AP1S2	1437998_at 1447903_x_at 1452657_at 1456252_x_at 1460036_at	20662	-3.392	-0.3487	Yes
166	LTA	1420353_at	20698	-3.438	-0.3399	Yes
167	NTN1	1422987_at 1454974_at	20710	-3.458	-0.3299	Yes
168	ICAM1	1424067_at	20776	-3.566	-0.3220	Yes
169	BDNF	1422168_a_at 1422169_a_at	20807	-3.621	-0.3124	Yes
170	HCFC1	1421972_s_at 1433736_at 1445688_at 1446868_at 1450439_at 1457875_at	20831	-3.657	-0.3024	Yes
171	KCNH3	1421619_at 1431690_at 1445805_x_at 1459107_at	20836	-3.660	-0.2914	Yes
172	ABHD8	1416863_at	20861	-3.702	-0.2813	Yes
173	MAP4K2	1428297_at 1434833_at 1450244_a_at	20871	-3.716	-0.2704	Yes
174	ARPC2	1437148_at 1442295_at	20933	-3.797	-0.2617	Yes
175	ZBTB5	1437484_at	21037	-3.983	-0.2544	Yes
176	TAZ	1416207_at 1453785_at	21062	-4.056	-0.2431	Yes
177	CD83	1416111_at	21143	-4.248	-0.2339	Yes
178	GADD45B	1420197_at 1449773_s_at 1450971_at	21323	-4.709	-0.2279	Yes
179	IL27RA	1449508_at	21556	-5.694	-0.2212	Yes
180	USP52	1426700_a_at	21560	-5.702	-0.2041	Yes
181	FOXJ2	1420373_at 1420374_at	21578	-5.821	-0.1872	Yes
182	TNIP1	1427689_a_at	21690	-6.558	-0.1723	Yes
183	RELB	1417856_at	21755	-7.349	-0.1530	Yes
184	HIVEP1	1422742_at	21776	-7.798	-0.1302	Yes
185	ZBTB9	1429125_at	21783	-7.885	-0.1065	Yes
186	LTB	1419135_at	21784	-7.914	-0.0825	Yes
187	CCL5	1418126_at	21821	-8.504	-0.0583	Yes
188	SMOC1	1448321_at	21857	-9.327	-0.0316	Yes
189	FBXL12	1448420_a_at	21901	-11.567	0.0015	Yes