Details for gene set V$E2F

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_minus
GeneSet	V$E2F_03
Enrichment Score (ES)	0.32189873
Normalized Enrichment Score (NES)	1.4222604
Nominal p-value	0.010714286
FDR q-value	0.13552094
FWER p-Value	0.926

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	TCP1	1442317_at 1448122_at	7	9.127	0.0286	Yes
2	BMP7	1418910_at 1432410_a_at	14	8.907	0.0565	Yes
3	SF4	1424381_at 1444699_at	35	7.820	0.0804	Yes
4	MCM4	1416214_at 1436708_x_at	94	6.274	0.0976	Yes
5	MCM6	1416251_at 1438852_x_at 1447756_x_at	95	6.259	0.1174	Yes
6	MYC	1424942_a_at	165	5.495	0.1316	Yes
7	PRPS1	1416052_at	244	5.034	0.1440	Yes
8	MRPL18	1448373_at	420	4.267	0.1495	Yes
9	TOPBP1	1452241_at 1458480_at	429	4.243	0.1625	Yes
10	UFD1L	1418087_at 1432367_a_at	452	4.173	0.1747	Yes
11	PCSK4	1425824_a_at	503	4.009	0.1851	Yes
12	DNAJC9	1426473_at	517	3.954	0.1971	Yes
13	RANBP1	1422547_at	570	3.814	0.2068	Yes
14	EZH2	1416544_at 1444263_at	581	3.793	0.2183	Yes
15	GMNN	1417506_at	688	3.583	0.2248	Yes
16	CDKN1A	1421679_a_at 1424638_at	774	3.430	0.2317	Yes
17	FKBP5	1416125_at 1447736_at 1448231_at 1458089_at	789	3.389	0.2418	Yes
18	RAD51	1418281_at	804	3.364	0.2518	Yes
19	UNG	1425753_a_at	811	3.351	0.2622	Yes
20	LIG1	1416641_at	927	3.145	0.2669	Yes
21	KLHDC3	1415991_a_at 1448164_at 1454747_a_at 1455910_at	1090	2.956	0.2688	Yes
22	CDC25A	1417131_at 1417132_at 1445995_at	1192	2.824	0.2731	Yes
23	KNTC1	1435575_at	1193	2.823	0.2820	Yes
24	SUV39H1	1427382_a_at 1432227_at 1432236_a_at	1216	2.803	0.2899	Yes
25	RCOR2	1417302_at	1256	2.758	0.2968	Yes
26	CDCA7	1428069_at 1445681_at	1268	2.749	0.3050	Yes
27	EIF4G2	1415863_at 1452758_s_at	1293	2.730	0.3126	Yes
28	UXT	1418986_a_at	1806	2.274	0.2962	Yes
29	DNAJC11	1433880_at 1433881_at 1439763_at 1446686_at 1447055_at	1925	2.205	0.2978	Yes
30	E2F3	1427462_at 1434564_at	2059	2.126	0.2984	Yes
31	NUP153	1441689_at 1441733_s_at 1452176_at	2075	2.114	0.3044	Yes
32	RPA2	1416433_at 1454011_a_at	2141	2.076	0.3080	Yes
33	AK2	1448450_at 1448451_at	2147	2.072	0.3144	Yes
34	RFC1	1418342_at 1449050_at 1451920_a_at	2268	2.015	0.3152	Yes
35	PRIM1	1418369_at 1444544_at 1449061_a_at	2309	1.995	0.3197	Yes
36	PTMA	1423455_at	2509	1.898	0.3166	Yes
37	RPS6KA5	1431050_at 1437625_at 1439004_at 1440343_at	2621	1.854	0.3173	Yes
38	MELK	1416558_at	2650	1.843	0.3219	Yes
39	NR3C2	1435991_at 1440306_at 1442533_at	2980	1.724	0.3122	No
40	GRIA4	1421351_at 1435722_at 1436772_at 1440891_at 1443285_at 1458230_at 1460097_at	3218	1.646	0.3066	No
41	EPHB1	1455188_at	3367	1.598	0.3048	No
42	DPYSL2	1433770_at 1450502_at 1458188_at 1458632_at	3380	1.595	0.3093	No
43	MCM7	1416030_a_at 1416031_s_at 1438320_s_at	3406	1.589	0.3132	No
44	EIF5A	1437859_x_at 1451470_s_at	4206	1.370	0.2808	No
45	POLA2	1425794_at 1448369_at 1456713_at	4282	1.356	0.2817	No
46	ANP32E	1420592_a_at 1447680_at	4349	1.339	0.2829	No
47	PDGFRA	1421916_at 1421917_at 1438946_at	4376	1.334	0.2859	No
48	KCTD15	1435339_at	4496	1.300	0.2846	No
49	LGALS1	1419573_a_at 1455439_a_at	4643	1.267	0.2819	No
50	FBXO5	1429499_at	4803	1.237	0.2785	No
51	PKMYT1	1418481_at 1438601_at	4959	1.207	0.2752	No
52	STAG2	1421849_at 1450396_at	5019	1.195	0.2763	No
53	POLD1	1448187_at 1456055_x_at	5538	1.101	0.2559	No
54	MCM3	1420029_at 1426653_at	5651	1.081	0.2542	No
55	SFRS2	1415807_s_at 1427504_s_at 1427816_at 1452439_s_at	5677	1.077	0.2565	No
56	ARHGAP6	1417704_a_at 1451867_x_at 1456333_a_at	5706	1.071	0.2586	No
57	ANP32A	1421918_at 1434555_at 1450407_a_at	5769	1.062	0.2591	No
58	WHSC1L1	1442085_at 1447931_at 1455668_at 1457630_at 1457793_a_at 1457794_at 1459907_a_at	5901	1.042	0.2564	No
59	SEMA5A	1422167_at 1434776_at 1437422_at 1446772_at 1446865_at 1446910_at 1459109_at	6208	0.997	0.2455	No
60	ORC1L	1422663_at 1443172_at	6487	0.954	0.2357	No
61	EVI1	1423011_at 1438325_at	6907	0.890	0.2193	No
62	NR4A2	1447863_s_at 1450749_a_at 1450750_a_at 1455034_at	6999	0.875	0.2179	No
63	PAQR4	1423101_at	7051	0.867	0.2183	No
64	PLK4	1419838_s_at 1426580_at 1452115_a_at	7212	0.841	0.2136	No
65	APRIN	1435242_at 1436161_at 1441553_at	7221	0.839	0.2159	No
66	DMC1	1420335_at 1449819_at	7387	0.812	0.2109	No
67	ZIC3	1423424_at 1438737_at	7389	0.811	0.2134	No
68	GLRA3	1450239_at	7429	0.806	0.2142	No
69	HNRPA0	1428407_at	7432	0.806	0.2166	No
70	SEZ6	1420885_a_at 1427674_a_at 1459972_x_at	7780	0.757	0.2031	No
71	KCND2	1422834_at 1422835_at 1446065_at 1447764_at 1450773_at 1459288_at	7813	0.751	0.2040	No
72	CDC45L	1416575_at 1457838_at	7844	0.747	0.2050	No
73	FBXL20	1442464_at 1445575_at 1452826_s_at 1456378_s_at	7990	0.727	0.2006	No
74	PPM1D	1434142_at 1449092_at 1459069_at	8145	0.702	0.1958	No
75	PCSK1	1421396_at	8238	0.687	0.1937	No
76	NRIP3	1418104_at 1431597_a_at 1448954_at	8261	0.684	0.1949	No
77	BRMS1L	1452850_s_at 1460443_at	8273	0.683	0.1965	No
78	CENPB	1426051_a_at 1435944_s_at	8435	0.659	0.1912	No
79	RET	1421359_at	8822	0.600	0.1754	No
80	DLL4	1421826_at 1421827_at	8936	0.586	0.1720	No
81	STMN1	1415849_s_at	9253	0.538	0.1592	No
82	DCLRE1A	1417904_at 1432097_a_at 1442329_at	9691	0.478	0.1407	No
83	PIM1	1423006_at 1435458_at	9985	0.437	0.1286	No
84	PPP1R9B	1447247_at 1447486_at	10311	0.396	0.1149	No
85	RPL28	1416074_a_at	10318	0.394	0.1159	No
86	TBX3	1437479_x_at 1439567_at 1444594_at 1445757_at 1448029_at	10487	0.369	0.1093	No
87	CACNA1G	1423365_at	10623	0.347	0.1042	No
88	DNMT1	1422946_a_at 1435122_x_at 1445637_at 1447877_x_at	10638	0.346	0.1047	No
89	REPS2	1435389_at 1446652_at	10839	0.321	0.0965	No
90	MAT2A	1423667_at 1433576_at 1438386_x_at 1438630_x_at 1438976_x_at 1439386_x_at 1456702_x_at	10855	0.319	0.0968	No
91	PEG3	1417355_at 1417356_at 1433924_at 1447731_at 1447732_x_at	10892	0.314	0.0962	No
92	FUS	1451285_at 1451286_s_at 1455831_at 1458801_at	11015	0.298	0.0915	No
93	NR6A1	1421515_at 1421516_at 1428825_at 1428826_at 1445872_at	11053	0.293	0.0907	No
94	ASXL2	1439063_at 1444754_at 1453295_at 1458366_at 1460597_at	11094	0.287	0.0898	No
95	SALL1	1450489_at	11540	0.221	0.0700	No
96	STAG1	1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at	11636	0.207	0.0663	No
97	PRKCSH	1416339_a_at	11640	0.206	0.0668	No
98	SLITRK3	1439250_at	11797	0.182	0.0603	No
99	PPRC1	1426381_at	11880	0.169	0.0570	No
100	AP4M1	1418846_at	11901	0.166	0.0566	No
101	VAMP3	1421102_a_at 1433693_x_at 1433916_at 1437708_x_at 1456245_x_at 1457391_at	12070	0.140	0.0494	No
102	IPO7	1442511_at 1454955_at 1458165_at	12118	0.133	0.0476	No
103	JPH1	1421520_at 1438428_at	12360	0.097	0.0368	No
104	ING3	1422805_a_at 1422806_x_at 1450760_a_at 1460082_at	12384	0.094	0.0361	No
105	ATE1	1420036_at 1420651_at 1420652_at 1435173_at 1446611_at 1449709_s_at	12626	0.059	0.0252	No
106	PODN	1435180_at	12634	0.058	0.0251	No
107	DLST	1423710_at 1430161_at 1431011_at 1437775_at	12974	0.002	0.0095	No
108	PLAGL1	1426208_x_at 1438588_at 1450533_a_at	13063	-0.014	0.0055	No
109	ADAMTS2	1435990_at 1455720_at 1457058_at	13373	-0.065	-0.0085	No
110	TREX2	1449367_at	13658	-0.115	-0.0212	No
111	RBBP4	1434892_x_at 1442443_at 1454791_a_at 1454875_a_at 1456260_at	13742	-0.133	-0.0246	No
112	NUTF2	1434367_s_at 1447440_at 1449017_at	13940	-0.167	-0.0331	No
113	PVRL1	1438111_at 1438421_at 1440131_at 1446488_at 1450819_at	14231	-0.220	-0.0457	No
114	RPS20	1456373_x_at 1456436_x_at	14512	-0.273	-0.0577	No
115	HMGN2	1433507_a_at	14597	-0.286	-0.0607	No
116	CDC6	1417019_a_at	15043	-0.376	-0.0799	No
117	FMO4	1425799_at 1444852_at	15078	-0.381	-0.0803	No
118	KCNA6	1421568_at 1441049_at 1456954_at	15118	-0.390	-0.0809	No
119	MCM2	1434079_s_at 1448777_at	15310	-0.431	-0.0883	No
120	ZIM2	1432297_at	15323	-0.434	-0.0874	No
121	E2F1	1417878_at 1431875_a_at 1447840_x_at	15380	-0.452	-0.0886	No
122	ARF3	1421789_s_at 1423973_a_at 1434787_at 1437331_a_at 1456007_at	15482	-0.475	-0.0917	No
123	PRKDC	1451576_at	15548	-0.496	-0.0931	No
124	NASP	1416042_s_at 1416043_at 1440328_at 1442728_at	15690	-0.533	-0.0979	No
125	HTF9C	1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at	15820	-0.560	-0.1021	No
126	A2BP1	1418314_a_at 1438217_at 1447735_x_at 1455358_at 1456921_at	16027	-0.607	-0.1096	No
127	ANKHD1	1419867_a_at 1436597_at 1440754_at 1441597_at 1442641_at 1448008_at 1453023_at 1455759_a_at	16176	-0.649	-0.1144	No
128	TLE3	1419654_at 1419655_at 1449554_at 1458512_at	16179	-0.650	-0.1124	No
129	TOP1	1423474_at 1438495_at 1457573_at 1459672_at	16190	-0.655	-0.1108	No
130	ATAD2	1436174_at 1443146_at 1443229_at	16401	-0.715	-0.1182	No
131	SLC16A2	1418446_at	16525	-0.753	-0.1214	No
132	EGLN2	1416533_at	16593	-0.772	-0.1221	No
133	ATP6V1D	1416951_a_at 1416952_at 1438993_a_at	16610	-0.777	-0.1203	No
134	TIAM1	1418057_at 1444373_at 1453887_a_at	16695	-0.808	-0.1216	No
135	AUTS2	1427293_a_at 1438680_at 1441869_x_at 1442360_at 1443062_at 1443070_at 1443770_x_at 1444069_at 1445307_at 1445469_at 1445538_at 1446849_at 1452379_at 1457139_at 1458592_at 1459338_at	16854	-0.857	-0.1262	No
136	KLF5	1430255_at 1451021_a_at 1451739_at	17024	-0.910	-0.1311	No
137	RNF121	1426503_a_at 1426504_a_at	17192	-0.963	-0.1357	No
138	ARID4A	1436191_at 1438464_at 1456420_at	17387	-1.026	-0.1414	No
139	HNRPD	1425142_a_at 1446083_at	17398	-1.029	-0.1386	No
140	DAXX	1419026_at	17755	-1.177	-0.1512	No
141	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	18076	-1.306	-0.1618	No
142	DDB2	1425706_a_at 1436680_s_at	18237	-1.379	-0.1647	No
143	PHF15	1430081_at 1455345_at	18295	-1.413	-0.1629	No
144	HNRPA1	1423531_a_at 1430020_x_at 1436549_a_at 1442758_at 1446038_at 1455305_x_at 1455740_at	18427	-1.476	-0.1642	No
145	CBX5	1421932_at 1421933_at 1421934_at 1450416_at 1454636_at 1459845_at	18437	-1.480	-0.1600	No
146	CCNT2	1427088_at 1427089_at 1435445_at 1452297_at 1453399_at 1457439_at	18482	-1.506	-0.1572	No
147	RHD	1417049_at	18543	-1.534	-0.1551	No
148	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	18680	-1.587	-0.1563	No
149	FANCG	1420960_at	18683	-1.587	-0.1514	No
150	RBL1	1424156_at 1425166_at 1432604_at 1454293_at	18749	-1.634	-0.1492	No
151	CASP8AP2	1449217_at	18948	-1.755	-0.1527	No
152	ARHGEF17	1419938_s_at 1419939_at 1433682_at 1442357_at 1447441_at	18968	-1.770	-0.1480	No
153	CTCF	1418330_at 1449042_at	19005	-1.800	-0.1440	No
154	EIF2S1	1440272_at 1452662_a_at	19026	-1.817	-0.1391	No
155	ZCCHC8	1423755_at 1441639_at	19661	-2.248	-0.1611	No
156	OSBPL7	1428893_at 1459966_at	19833	-2.412	-0.1614	No
157	NHLRC2	1429145_at 1433929_at 1444863_at 1453048_at 1457312_at	20052	-2.630	-0.1630	No
158	MXD3	1422970_at 1438847_at 1448878_at	20338	-2.963	-0.1668	No
159	MAZ	1427099_at	20396	-3.020	-0.1598	No
160	LUC7L2	1423251_at 1427087_at 1436165_at 1436766_at 1436767_at 1437761_at 1458423_at	20930	-3.793	-0.1723	No
161	CTDSP1	1452055_at	20998	-3.921	-0.1629	No
162	SLBP	1430058_at 1460168_at	21077	-4.090	-0.1536	No
163	H2AFZ	1441370_at	21157	-4.282	-0.1436	No
164	HRBL	1425362_at 1437642_at 1441347_at	21187	-4.359	-0.1312	No
165	RAB11B	1423448_at	21282	-4.613	-0.1209	No
166	E2F7	1437187_at	21335	-4.748	-0.1082	No
167	SLC25A11	1426586_at	21425	-5.058	-0.0963	No
168	USP52	1426700_a_at	21560	-5.702	-0.0844	No
169	DDX17	1437773_x_at 1439037_at 1452155_a_at	21573	-5.789	-0.0666	No
170	DCK	1428838_a_at 1439012_a_at 1449176_a_at	21820	-8.499	-0.0510	No
171	ID3	1416630_at	21834	-8.786	-0.0238	No
172	AXUD1	1434350_at	21843	-8.944	0.0042	No