Dataset | Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos |
Phenotype | phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos |
Upregulated in class | ATM_minus |
GeneSet | V$E2F_02 |
Enrichment Score (ES) | 0.30881605 |
Normalized Enrichment Score (NES) | 1.3363723 |
Nominal p-value | 0.01650165 |
FDR q-value | 0.1706737 |
FWER p-Value | 1.0 |
PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|---|
1 | MCM4 | 1416214_at 1436708_x_at | 94 | 6.274 | 0.0182 | Yes | ||
2 | MCM6 | 1416251_at 1438852_x_at 1447756_x_at | 95 | 6.259 | 0.0406 | Yes | ||
3 | MYC | 1424942_a_at | 165 | 5.495 | 0.0572 | Yes | ||
4 | PRPS1 | 1416052_at | 244 | 5.034 | 0.0716 | Yes | ||
5 | SNRPD1 | 1416336_s_at | 250 | 5.006 | 0.0894 | Yes | ||
6 | ATF5 | 1425927_a_at | 280 | 4.852 | 0.1054 | Yes | ||
7 | TOPBP1 | 1452241_at 1458480_at | 429 | 4.243 | 0.1138 | Yes | ||
8 | DNAJC9 | 1426473_at | 517 | 3.954 | 0.1240 | Yes | ||
9 | PHF5A | 1424170_at | 563 | 3.833 | 0.1357 | Yes | ||
10 | RANBP1 | 1422547_at | 570 | 3.814 | 0.1491 | Yes | ||
11 | EZH2 | 1416544_at 1444263_at | 581 | 3.793 | 0.1622 | Yes | ||
12 | GMNN | 1417506_at | 688 | 3.583 | 0.1702 | Yes | ||
13 | HMGA1 | 1416184_s_at | 729 | 3.499 | 0.1809 | Yes | ||
14 | FKBP5 | 1416125_at 1447736_at 1448231_at 1458089_at | 789 | 3.389 | 0.1904 | Yes | ||
15 | UNG | 1425753_a_at | 811 | 3.351 | 0.2014 | Yes | ||
16 | RQCD1 | 1450887_at | 869 | 3.249 | 0.2105 | Yes | ||
17 | POLE4 | 1423371_at 1423372_at 1432286_at 1444739_at | 1100 | 2.946 | 0.2105 | Yes | ||
18 | CDC5L | 1428092_at 1460429_at | 1156 | 2.874 | 0.2182 | Yes | ||
19 | CDC25A | 1417131_at 1417132_at 1445995_at | 1192 | 2.824 | 0.2268 | Yes | ||
20 | NCL | 1415771_at 1415772_at 1415773_at 1442404_at 1456528_x_at | 1203 | 2.812 | 0.2364 | Yes | ||
21 | SUV39H1 | 1427382_a_at 1432227_at 1432236_a_at | 1216 | 2.803 | 0.2459 | Yes | ||
22 | CDCA7 | 1428069_at 1445681_at | 1268 | 2.749 | 0.2534 | Yes | ||
23 | HNRPA2B1 | 1420365_a_at 1433829_a_at 1433830_at 1434047_x_at | 1296 | 2.728 | 0.2620 | Yes | ||
24 | PCNA | 1417947_at | 1322 | 2.702 | 0.2705 | Yes | ||
25 | POU4F1 | 1429667_at 1429668_at | 1635 | 2.402 | 0.2648 | Yes | ||
26 | MRPL40 | 1448849_at | 1796 | 2.281 | 0.2656 | Yes | ||
27 | PPIG | 1434475_at 1435341_at 1436505_at | 1843 | 2.252 | 0.2716 | Yes | ||
28 | EIF4A1 | 1427058_at 1430980_a_at 1434985_a_at | 1856 | 2.244 | 0.2791 | Yes | ||
29 | SLC9A5 | 1420070_a_at 1455760_at | 1907 | 2.216 | 0.2847 | Yes | ||
30 | E2F3 | 1427462_at 1434564_at | 2059 | 2.126 | 0.2854 | Yes | ||
31 | AK2 | 1448450_at 1448451_at | 2147 | 2.072 | 0.2888 | Yes | ||
32 | MAP3K7 | 1419988_at 1425795_a_at 1426627_at 1449693_at 1455441_at 1458787_at | 2165 | 2.066 | 0.2955 | Yes | ||
33 | SUMO1 | 1438289_a_at 1444557_at 1451005_at 1456349_x_at | 2428 | 1.936 | 0.2904 | Yes | ||
34 | SYNCRIP | 1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at | 2498 | 1.902 | 0.2940 | Yes | ||
35 | PTMA | 1423455_at | 2509 | 1.898 | 0.3004 | Yes | ||
36 | HNRPR | 1427129_a_at 1438807_at 1452030_a_at | 2545 | 1.882 | 0.3055 | Yes | ||
37 | RPS6KA5 | 1431050_at 1437625_at 1439004_at 1440343_at | 2621 | 1.854 | 0.3087 | Yes | ||
38 | NOLC1 | 1428869_at 1428870_at 1450087_a_at | 2868 | 1.765 | 0.3038 | Yes | ||
39 | POLE2 | 1427094_at 1431440_at | 2947 | 1.735 | 0.3064 | Yes | ||
40 | NRK | 1436399_s_at 1450078_at 1450079_at | 3138 | 1.668 | 0.3037 | Yes | ||
41 | GRIA4 | 1421351_at 1435722_at 1436772_at 1440891_at 1443285_at 1458230_at 1460097_at | 3218 | 1.646 | 0.3059 | Yes | ||
42 | EPHB1 | 1455188_at | 3367 | 1.598 | 0.3049 | Yes | ||
43 | MCM7 | 1416030_a_at 1416031_s_at 1438320_s_at | 3406 | 1.589 | 0.3088 | Yes | ||
44 | ACO2 | 1436934_s_at 1442102_at 1451002_at | 3592 | 1.530 | 0.3058 | No | ||
45 | PRPS2 | 1420637_at 1420638_at 1443418_at 1454843_at | 3805 | 1.474 | 0.3014 | No | ||
46 | MCM8 | 1429557_at | 3854 | 1.456 | 0.3044 | No | ||
47 | KBTBD7 | 1428192_at 1439865_at 1452700_s_at | 4450 | 1.311 | 0.2817 | No | ||
48 | MSH5 | 1430771_a_at 1449537_at | 4541 | 1.291 | 0.2822 | No | ||
49 | FBXO5 | 1429499_at | 4803 | 1.237 | 0.2747 | No | ||
50 | PKMYT1 | 1418481_at 1438601_at | 4959 | 1.207 | 0.2719 | No | ||
51 | STAG2 | 1421849_at 1450396_at | 5019 | 1.195 | 0.2735 | No | ||
52 | PRPF4B | 1425497_a_at 1425498_at 1436427_at 1451732_at 1451909_a_at 1455696_a_at | 5090 | 1.184 | 0.2745 | No | ||
53 | MAPK6 | 1419168_at 1419169_at 1429963_at 1459146_at | 5455 | 1.115 | 0.2618 | No | ||
54 | POLD1 | 1448187_at 1456055_x_at | 5538 | 1.101 | 0.2620 | No | ||
55 | MCM3 | 1420029_at 1426653_at | 5651 | 1.081 | 0.2607 | No | ||
56 | ARHGAP6 | 1417704_a_at 1451867_x_at 1456333_a_at | 5706 | 1.071 | 0.2621 | No | ||
57 | GPRC5B | 1424613_at 1451411_at | 5972 | 1.030 | 0.2536 | No | ||
58 | SFRS7 | 1424033_at 1424883_s_at 1436871_at | 6480 | 0.955 | 0.2337 | No | ||
59 | POLR2A | 1422311_a_at 1426242_at 1458710_at | 6566 | 0.943 | 0.2332 | No | ||
60 | POLD3 | 1426838_at 1426839_at 1443733_x_at 1459647_at | 6626 | 0.932 | 0.2338 | No | ||
61 | CSPG2 | 1421694_a_at 1427256_at 1427257_at 1433043_at 1433044_at 1447586_at 1447887_x_at 1459767_x_at | 6672 | 0.924 | 0.2351 | No | ||
62 | CORT | 1449820_at | 6799 | 0.907 | 0.2325 | No | ||
63 | CLSPN | 1441984_at 1456280_at | 7017 | 0.872 | 0.2257 | No | ||
64 | PAQR4 | 1423101_at | 7051 | 0.867 | 0.2273 | No | ||
65 | SEMA6A | 1421414_a_at 1425903_at 1436458_at | 7372 | 0.815 | 0.2155 | No | ||
66 | GLRA3 | 1450239_at | 7429 | 0.806 | 0.2158 | No | ||
67 | PAX6 | 1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at | 7970 | 0.731 | 0.1937 | No | ||
68 | GABRB3 | 1421189_at 1421190_at 1435021_at | 8137 | 0.703 | 0.1886 | No | ||
69 | PPM1D | 1434142_at 1449092_at 1459069_at | 8145 | 0.702 | 0.1908 | No | ||
70 | PCSK1 | 1421396_at | 8238 | 0.687 | 0.1890 | No | ||
71 | BRMS1L | 1452850_s_at 1460443_at | 8273 | 0.683 | 0.1899 | No | ||
72 | H2AFV | 1428029_a_at 1436596_at | 8307 | 0.677 | 0.1908 | No | ||
73 | ARHGAP11A | 1438434_at | 8723 | 0.616 | 0.1739 | No | ||
74 | FANCD2 | 1430916_at 1438339_at 1439091_at 1442092_at | 8797 | 0.605 | 0.1728 | No | ||
75 | RET | 1421359_at | 8822 | 0.600 | 0.1738 | No | ||
76 | STMN1 | 1415849_s_at | 9253 | 0.538 | 0.1560 | No | ||
77 | PB1 | 1426877_a_at 1426878_at 1427266_at 1442603_at | 9658 | 0.482 | 0.1392 | No | ||
78 | PIM1 | 1423006_at 1435458_at | 9985 | 0.437 | 0.1258 | No | ||
79 | FANCC | 1442265_at 1447632_at 1450861_at | 10628 | 0.347 | 0.0975 | No | ||
80 | DNMT1 | 1422946_a_at 1435122_x_at 1445637_at 1447877_x_at | 10638 | 0.346 | 0.0983 | No | ||
81 | PEG3 | 1417355_at 1417356_at 1433924_at 1447731_at 1447732_x_at | 10892 | 0.314 | 0.0878 | No | ||
82 | NR6A1 | 1421515_at 1421516_at 1428825_at 1428826_at 1445872_at | 11053 | 0.293 | 0.0815 | No | ||
83 | ASXL2 | 1439063_at 1444754_at 1453295_at 1458366_at 1460597_at | 11094 | 0.287 | 0.0807 | No | ||
84 | GATA1 | 1449232_at | 11198 | 0.270 | 0.0770 | No | ||
85 | MAPT | 1417885_at 1424718_at 1424719_a_at 1445634_at 1455028_at | 11333 | 0.250 | 0.0717 | No | ||
86 | STAG1 | 1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at | 11636 | 0.207 | 0.0586 | No | ||
87 | AP4M1 | 1418846_at | 11901 | 0.166 | 0.0471 | No | ||
88 | IPO7 | 1442511_at 1454955_at 1458165_at | 12118 | 0.133 | 0.0376 | No | ||
89 | KCNS2 | 1421342_at 1441211_at 1457325_at | 12165 | 0.126 | 0.0360 | No | ||
90 | ING3 | 1422805_a_at 1422806_x_at 1450760_a_at 1460082_at | 12384 | 0.094 | 0.0263 | No | ||
91 | GSPT1 | 1426736_at 1426737_at 1435000_at 1446550_at 1452168_x_at 1455173_at | 12580 | 0.065 | 0.0176 | No | ||
92 | PODN | 1435180_at | 12634 | 0.058 | 0.0153 | No | ||
93 | SYNGR4 | 1418875_at | 12953 | 0.006 | 0.0007 | No | ||
94 | PLAGL1 | 1426208_x_at 1438588_at 1450533_a_at | 13063 | -0.014 | -0.0042 | No | ||
95 | MSH2 | 1416988_at 1447888_x_at | 13177 | -0.033 | -0.0093 | No | ||
96 | RASAL2 | 1436910_at 1444671_at | 13347 | -0.062 | -0.0168 | No | ||
97 | ADAMTS2 | 1435990_at 1455720_at 1457058_at | 13373 | -0.065 | -0.0177 | No | ||
98 | ILF3 | 1422546_at 1436802_at 1460669_at | 13981 | -0.175 | -0.0450 | No | ||
99 | HS6ST3 | 1421599_at | 14034 | -0.185 | -0.0467 | No | ||
100 | EED | 1448653_at | 14356 | -0.244 | -0.0606 | No | ||
101 | RPS20 | 1456373_x_at 1456436_x_at | 14512 | -0.273 | -0.0667 | No | ||
102 | RRM2 | 1416120_at 1434437_x_at 1448226_at | 14535 | -0.276 | -0.0667 | No | ||
103 | HCN3 | 1451023_at | 14545 | -0.278 | -0.0662 | No | ||
104 | HIRA | 1436241_s_at 1450049_a_at 1450050_at 1459103_at | 14552 | -0.278 | -0.0654 | No | ||
105 | NELL2 | 1423560_at 1423561_at | 14795 | -0.328 | -0.0754 | No | ||
106 | CBX3 | 1432628_at 1454305_at | 14878 | -0.343 | -0.0779 | No | ||
107 | FHOD1 | 1435557_at | 15035 | -0.374 | -0.0837 | No | ||
108 | CDC6 | 1417019_a_at | 15043 | -0.376 | -0.0827 | No | ||
109 | FMO4 | 1425799_at 1444852_at | 15078 | -0.381 | -0.0829 | No | ||
110 | SFRS10 | 1419543_a_at 1427432_a_at 1441466_at 1446496_at | 15092 | -0.386 | -0.0821 | No | ||
111 | HOXC10 | 1439798_at | 15095 | -0.386 | -0.0808 | No | ||
112 | KCNA6 | 1421568_at 1441049_at 1456954_at | 15118 | -0.390 | -0.0804 | No | ||
113 | MCM2 | 1434079_s_at 1448777_at | 15310 | -0.431 | -0.0877 | No | ||
114 | ZIM2 | 1432297_at | 15323 | -0.434 | -0.0867 | No | ||
115 | TYRO3 | 1425248_a_at 1425249_a_at | 15357 | -0.445 | -0.0866 | No | ||
116 | E2F1 | 1417878_at 1431875_a_at 1447840_x_at | 15380 | -0.452 | -0.0860 | No | ||
117 | PRKDC | 1451576_at | 15548 | -0.496 | -0.0919 | No | ||
118 | NASP | 1416042_s_at 1416043_at 1440328_at 1442728_at | 15690 | -0.533 | -0.0964 | No | ||
119 | EFNA5 | 1421796_a_at 1436866_at 1440052_at 1446383_at 1451930_at | 15730 | -0.543 | -0.0963 | No | ||
120 | CCNT1 | 1419313_at 1456477_at | 15780 | -0.550 | -0.0965 | No | ||
121 | HTF9C | 1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at | 15820 | -0.560 | -0.0963 | No | ||
122 | TLE3 | 1419654_at 1419655_at 1449554_at 1458512_at | 16179 | -0.650 | -0.1104 | No | ||
123 | ATAD2 | 1436174_at 1443146_at 1443229_at | 16401 | -0.715 | -0.1180 | No | ||
124 | RAVER1 | 1427110_at 1427111_s_at 1444966_at | 16760 | -0.826 | -0.1315 | No | ||
125 | AP1S1 | 1416087_at | 16818 | -0.847 | -0.1311 | No | ||
126 | RTBDN | 1451603_at 1457331_at | 16834 | -0.852 | -0.1287 | No | ||
127 | DNAJC5G | 1437814_at | 17277 | -0.991 | -0.1455 | No | ||
128 | SP3 | 1431804_a_at 1459360_at | 17288 | -0.996 | -0.1424 | No | ||
129 | ARID4A | 1436191_at 1438464_at 1456420_at | 17387 | -1.026 | -0.1432 | No | ||
130 | HNRPD | 1425142_a_at 1446083_at | 17398 | -1.029 | -0.1399 | No | ||
131 | HNRPUL1 | 1451984_at | 17966 | -1.263 | -0.1615 | No | ||
132 | DMD | 1417307_at 1430320_at 1446156_at 1448665_at 1457022_at | 18076 | -1.306 | -0.1618 | No | ||
133 | NUP62 | 1415925_a_at 1415926_at 1437612_at 1438917_x_at 1447905_x_at 1448150_at | 18238 | -1.380 | -0.1642 | No | ||
134 | PHF15 | 1430081_at 1455345_at | 18295 | -1.413 | -0.1617 | No | ||
135 | MYH10 | 1441057_at 1452740_at | 18550 | -1.535 | -0.1679 | No | ||
136 | TMPO | 1421237_at 1426020_at 1426349_s_at 1428976_at 1452036_a_at | 18654 | -1.574 | -0.1670 | No | ||
137 | SFRS1 | 1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at | 18680 | -1.587 | -0.1624 | No | ||
138 | FANCG | 1420960_at | 18683 | -1.587 | -0.1568 | No | ||
139 | RBL1 | 1424156_at 1425166_at 1432604_at 1454293_at | 18749 | -1.634 | -0.1540 | No | ||
140 | USP37 | 1434242_at 1438212_at | 18838 | -1.688 | -0.1519 | No | ||
141 | CASP8AP2 | 1449217_at | 18948 | -1.755 | -0.1507 | No | ||
142 | UGCGL1 | 1432318_at 1448009_at 1455839_at | 19081 | -1.848 | -0.1501 | No | ||
143 | ACBD6 | 1452601_a_at 1453199_at | 19094 | -1.855 | -0.1440 | No | ||
144 | SOAT1 | 1417695_a_at 1417696_at 1417697_at 1426818_at 1448068_at | 19142 | -1.898 | -0.1393 | No | ||
145 | TBX6 | 1449868_at | 19258 | -1.984 | -0.1375 | No | ||
146 | ZCCHC8 | 1423755_at 1441639_at | 19661 | -2.248 | -0.1479 | No | ||
147 | YBX2 | 1420762_a_at | 19728 | -2.310 | -0.1427 | No | ||
148 | IL4I1 | 1419192_at | 19954 | -2.535 | -0.1439 | No | ||
149 | ZBTB4 | 1429722_at 1460488_at | 20319 | -2.930 | -0.1501 | No | ||
150 | MXD3 | 1422970_at 1438847_at 1448878_at | 20338 | -2.963 | -0.1403 | No | ||
151 | ALDH6A1 | 1448104_at | 20363 | -2.992 | -0.1307 | No | ||
152 | STK35 | 1431107_at 1439802_at | 20364 | -2.993 | -0.1200 | No | ||
153 | MAZ | 1427099_at | 20396 | -3.020 | -0.1106 | No | ||
154 | PHC1 | 1423212_at | 20522 | -3.189 | -0.1049 | No | ||
155 | TRIM39 | 1418851_at | 21110 | -4.153 | -0.1169 | No | ||
156 | H2AFZ | 1441370_at | 21157 | -4.282 | -0.1037 | No | ||
157 | E2F7 | 1437187_at | 21335 | -4.748 | -0.0948 | No | ||
158 | BRPF1 | 1460402_at | 21424 | -5.057 | -0.0807 | No | ||
159 | USP52 | 1426700_a_at | 21560 | -5.702 | -0.0664 | No | ||
160 | SLCO3A1 | 1418030_at 1434537_at 1448918_at | 21613 | -5.996 | -0.0473 | No | ||
161 | DCK | 1428838_a_at 1439012_a_at 1449176_a_at | 21820 | -8.499 | -0.0263 | No | ||
162 | ID3 | 1416630_at | 21834 | -8.786 | 0.0046 | No |