Details for gene set V$E2F4DP1

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_minus
GeneSet	V$E2F4DP1_01
Enrichment Score (ES)	0.3285034
Normalized Enrichment Score (NES)	1.4239137
Nominal p-value	0.0
FDR q-value	0.15555587
FWER p-Value	0.925

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	MCM4	1416214_at 1436708_x_at	94	6.274	0.0179	Yes
2	MCM6	1416251_at 1438852_x_at 1447756_x_at	95	6.259	0.0401	Yes
3	MYC	1424942_a_at	165	5.495	0.0564	Yes
4	PRPS1	1416052_at	244	5.034	0.0706	Yes
5	SNRPD1	1416336_s_at	250	5.006	0.0881	Yes
6	ATF5	1425927_a_at	280	4.852	0.1040	Yes
7	RBBP7	1415775_at 1456227_x_at	397	4.357	0.1141	Yes
8	TOPBP1	1452241_at 1458480_at	429	4.243	0.1277	Yes
9	DNAJC9	1426473_at	517	3.954	0.1377	Yes
10	PHF5A	1424170_at	563	3.833	0.1492	Yes
11	RANBP1	1422547_at	570	3.814	0.1625	Yes
12	EZH2	1416544_at 1444263_at	581	3.793	0.1755	Yes
13	GMNN	1417506_at	688	3.583	0.1833	Yes
14	HMGA1	1416184_s_at	729	3.499	0.1939	Yes
15	FKBP5	1416125_at 1447736_at 1448231_at 1458089_at	789	3.389	0.2031	Yes
16	UNG	1425753_a_at	811	3.351	0.2141	Yes
17	RQCD1	1450887_at	869	3.249	0.2229	Yes
18	LIG1	1416641_at	927	3.145	0.2315	Yes
19	POLE4	1423371_at 1423372_at 1432286_at 1444739_at	1100	2.946	0.2340	Yes
20	CDC5L	1428092_at 1460429_at	1156	2.874	0.2417	Yes
21	CDC25A	1417131_at 1417132_at 1445995_at	1192	2.824	0.2501	Yes
22	NCL	1415771_at 1415772_at 1415773_at 1442404_at 1456528_x_at	1203	2.812	0.2596	Yes
23	SUV39H1	1427382_a_at 1432227_at 1432236_a_at	1216	2.803	0.2689	Yes
24	CDCA7	1428069_at 1445681_at	1268	2.749	0.2763	Yes
25	HNRPA2B1	1420365_a_at 1433829_a_at 1433830_at 1434047_x_at	1296	2.728	0.2848	Yes
26	PCNA	1417947_at	1322	2.702	0.2932	Yes
27	POU4F1	1429667_at 1429668_at	1635	2.402	0.2874	Yes
28	MRPL40	1448849_at	1796	2.281	0.2881	Yes
29	EIF4A1	1427058_at 1430980_a_at 1434985_a_at	1856	2.244	0.2933	Yes
30	SLC9A5	1420070_a_at 1455760_at	1907	2.216	0.2989	Yes
31	OLFML3	1448475_at	2021	2.143	0.3013	Yes
32	E2F3	1427462_at 1434564_at	2059	2.126	0.3071	Yes
33	AK2	1448450_at 1448451_at	2147	2.072	0.3105	Yes
34	MAP3K7	1419988_at 1425795_a_at 1426627_at 1449693_at 1455441_at 1458787_at	2165	2.066	0.3170	Yes
35	SUMO1	1438289_a_at 1444557_at 1451005_at 1456349_x_at	2428	1.936	0.3118	Yes
36	SYNCRIP	1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at	2498	1.902	0.3154	Yes
37	HNRPR	1427129_a_at 1438807_at 1452030_a_at	2545	1.882	0.3200	Yes
38	RPS6KA5	1431050_at 1437625_at 1439004_at 1440343_at	2621	1.854	0.3231	Yes
39	NOLC1	1428869_at 1428870_at 1450087_a_at	2868	1.765	0.3180	Yes
40	POLE2	1427094_at 1431440_at	2947	1.735	0.3206	Yes
41	NRK	1436399_s_at 1450078_at 1450079_at	3138	1.668	0.3178	Yes
42	GRIA4	1421351_at 1435722_at 1436772_at 1440891_at 1443285_at 1458230_at 1460097_at	3218	1.646	0.3200	Yes
43	NPR3	1435184_at 1448024_at 1450286_at	3322	1.615	0.3210	Yes
44	EPHB1	1455188_at	3367	1.598	0.3246	Yes
45	MCM7	1416030_a_at 1416031_s_at 1438320_s_at	3406	1.589	0.3285	Yes
46	ACO2	1436934_s_at 1442102_at 1451002_at	3592	1.530	0.3254	No
47	PRPS2	1420637_at 1420638_at 1443418_at 1454843_at	3805	1.474	0.3209	No
48	MCM8	1429557_at	3854	1.456	0.3239	No
49	KBTBD7	1428192_at 1439865_at 1452700_s_at	4450	1.311	0.3012	No
50	MSH5	1430771_a_at 1449537_at	4541	1.291	0.3016	No
51	FBXO5	1429499_at	4803	1.237	0.2940	No
52	PKMYT1	1418481_at 1438601_at	4959	1.207	0.2912	No
53	STAG2	1421849_at 1450396_at	5019	1.195	0.2927	No
54	PRPF4B	1425497_a_at 1425498_at 1436427_at 1451732_at 1451909_a_at 1455696_a_at	5090	1.184	0.2937	No
55	LHX5	1420348_at	5366	1.132	0.2850	No
56	MAPK6	1419168_at 1419169_at 1429963_at 1459146_at	5455	1.115	0.2849	No
57	POLD1	1448187_at 1456055_x_at	5538	1.101	0.2851	No
58	MCM3	1420029_at 1426653_at	5651	1.081	0.2838	No
59	ARHGAP6	1417704_a_at 1451867_x_at 1456333_a_at	5706	1.071	0.2851	No
60	GPRC5B	1424613_at 1451411_at	5972	1.030	0.2766	No
61	SFRS7	1424033_at 1424883_s_at 1436871_at	6480	0.955	0.2567	No
62	POLR2A	1422311_a_at 1426242_at 1458710_at	6566	0.943	0.2561	No
63	POLD3	1426838_at 1426839_at 1443733_x_at 1459647_at	6626	0.932	0.2567	No
64	CSPG2	1421694_a_at 1427256_at 1427257_at 1433043_at 1433044_at 1447586_at 1447887_x_at 1459767_x_at	6672	0.924	0.2579	No
65	CORT	1449820_at	6799	0.907	0.2553	No
66	CLSPN	1441984_at 1456280_at	7017	0.872	0.2484	No
67	PAQR4	1423101_at	7051	0.867	0.2500	No
68	SEMA6A	1421414_a_at 1425903_at 1436458_at	7372	0.815	0.2382	No
69	SEZ6	1420885_a_at 1427674_a_at 1459972_x_at	7780	0.757	0.2222	No
70	PAX6	1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at	7970	0.731	0.2161	No
71	GABRB3	1421189_at 1421190_at 1435021_at	8137	0.703	0.2109	No
72	PPM1D	1434142_at 1449092_at 1459069_at	8145	0.702	0.2131	No
73	PCSK1	1421396_at	8238	0.687	0.2113	No
74	BRMS1L	1452850_s_at 1460443_at	8273	0.683	0.2122	No
75	H2AFV	1428029_a_at 1436596_at	8307	0.677	0.2130	No
76	PAPOLG	1427241_at 1446307_at	8637	0.628	0.2002	No
77	ARHGAP11A	1438434_at	8723	0.616	0.1984	No
78	FANCD2	1430916_at 1438339_at 1439091_at 1442092_at	8797	0.605	0.1972	No
79	RET	1421359_at	8822	0.600	0.1982	No
80	STMN1	1415849_s_at	9253	0.538	0.1804	No
81	PB1	1426877_a_at 1426878_at 1427266_at 1442603_at	9658	0.482	0.1635	No
82	PIM1	1423006_at 1435458_at	9985	0.437	0.1501	No
83	FANCC	1442265_at 1447632_at 1450861_at	10628	0.347	0.1219	No
84	DNMT1	1422946_a_at 1435122_x_at 1445637_at 1447877_x_at	10638	0.346	0.1227	No
85	MAT2A	1423667_at 1433576_at 1438386_x_at 1438630_x_at 1438976_x_at 1439386_x_at 1456702_x_at	10855	0.319	0.1139	No
86	PEG3	1417355_at 1417356_at 1433924_at 1447731_at 1447732_x_at	10892	0.314	0.1133	No
87	ASXL2	1439063_at 1444754_at 1453295_at 1458366_at 1460597_at	11094	0.287	0.1051	No
88	GATA1	1449232_at	11198	0.270	0.1013	No
89	MAPT	1417885_at 1424718_at 1424719_a_at 1445634_at 1455028_at	11333	0.250	0.0961	No
90	MDGA1	1432062_at	11561	0.219	0.0864	No
91	STAG1	1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at	11636	0.207	0.0837	No
92	AP4M1	1418846_at	11901	0.166	0.0722	No
93	IPO7	1442511_at 1454955_at 1458165_at	12118	0.133	0.0628	No
94	KCNS2	1421342_at 1441211_at 1457325_at	12165	0.126	0.0611	No
95	ING3	1422805_a_at 1422806_x_at 1450760_a_at 1460082_at	12384	0.094	0.0514	No
96	KLF4	1417394_at 1417395_at	12475	0.081	0.0476	No
97	GSPT1	1426736_at 1426737_at 1435000_at 1446550_at 1452168_x_at 1455173_at	12580	0.065	0.0430	No
98	PODN	1435180_at	12634	0.058	0.0408	No
99	SYNGR4	1418875_at	12953	0.006	0.0262	No
100	MSH2	1416988_at 1447888_x_at	13177	-0.033	0.0161	No
101	RASAL2	1436910_at 1444671_at	13347	-0.062	0.0085	No
102	ADAMTS2	1435990_at 1455720_at 1457058_at	13373	-0.065	0.0076	No
103	ILF3	1422546_at 1436802_at 1460669_at	13981	-0.175	-0.0197	No
104	HS6ST3	1421599_at	14034	-0.185	-0.0214	No
105	EED	1448653_at	14356	-0.244	-0.0353	No
106	RPS20	1456373_x_at 1456436_x_at	14512	-0.273	-0.0414	No
107	RRM2	1416120_at 1434437_x_at 1448226_at	14535	-0.276	-0.0415	No
108	HCN3	1451023_at	14545	-0.278	-0.0409	No
109	HIRA	1436241_s_at 1450049_a_at 1450050_at 1459103_at	14552	-0.278	-0.0402	No
110	NELL2	1423560_at 1423561_at	14795	-0.328	-0.0501	No
111	CBX3	1432628_at 1454305_at	14878	-0.343	-0.0527	No
112	FHOD1	1435557_at	15035	-0.374	-0.0585	No
113	CDC6	1417019_a_at	15043	-0.376	-0.0575	No
114	FMO4	1425799_at 1444852_at	15078	-0.381	-0.0577	No
115	SFRS10	1419543_a_at 1427432_a_at 1441466_at 1446496_at	15092	-0.386	-0.0570	No
116	HOXC10	1439798_at	15095	-0.386	-0.0557	No
117	KCNA6	1421568_at 1441049_at 1456954_at	15118	-0.390	-0.0553	No
118	MCM2	1434079_s_at 1448777_at	15310	-0.431	-0.0626	No
119	ZIM2	1432297_at	15323	-0.434	-0.0616	No
120	TYRO3	1425248_a_at 1425249_a_at	15357	-0.445	-0.0615	No
121	E2F1	1417878_at 1431875_a_at 1447840_x_at	15380	-0.452	-0.0609	No
122	PRKDC	1451576_at	15548	-0.496	-0.0668	No
123	NASP	1416042_s_at 1416043_at 1440328_at 1442728_at	15690	-0.533	-0.0714	No
124	EFNA5	1421796_a_at 1436866_at 1440052_at 1446383_at 1451930_at	15730	-0.543	-0.0713	No
125	CCNT1	1419313_at 1456477_at	15780	-0.550	-0.0716	No
126	HTF9C	1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at	15820	-0.560	-0.0714	No
127	TLE3	1419654_at 1419655_at 1449554_at 1458512_at	16179	-0.650	-0.0855	No
128	ONECUT1	1421447_at 1450252_at 1456974_at	16240	-0.670	-0.0859	No
129	ATAD2	1436174_at 1443146_at 1443229_at	16401	-0.715	-0.0908	No
130	RAVER1	1427110_at 1427111_s_at 1444966_at	16760	-0.826	-0.1043	No
131	AP1S1	1416087_at	16818	-0.847	-0.1039	No
132	RTBDN	1451603_at 1457331_at	16834	-0.852	-0.1016	No
133	DNAJC5G	1437814_at	17277	-0.991	-0.1184	No
134	SP3	1431804_a_at 1459360_at	17288	-0.996	-0.1153	No
135	ARID4A	1436191_at 1438464_at 1456420_at	17387	-1.026	-0.1161	No
136	HNRPD	1425142_a_at 1446083_at	17398	-1.029	-0.1130	No
137	HNRPUL1	1451984_at	17966	-1.263	-0.1345	No
138	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	18076	-1.306	-0.1349	No
139	NUP62	1415925_a_at 1415926_at 1437612_at 1438917_x_at 1447905_x_at 1448150_at	18238	-1.380	-0.1374	No
140	PHF15	1430081_at 1455345_at	18295	-1.413	-0.1350	No
141	MYH10	1441057_at 1452740_at	18550	-1.535	-0.1412	No
142	TMPO	1421237_at 1426020_at 1426349_s_at 1428976_at 1452036_a_at	18654	-1.574	-0.1404	No
143	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	18680	-1.587	-0.1359	No
144	FANCG	1420960_at	18683	-1.587	-0.1304	No
145	RBL1	1424156_at 1425166_at 1432604_at 1454293_at	18749	-1.634	-0.1276	No
146	USP37	1434242_at 1438212_at	18838	-1.688	-0.1256	No
147	CASP8AP2	1449217_at	18948	-1.755	-0.1244	No
148	UGCGL1	1432318_at 1448009_at 1455839_at	19081	-1.848	-0.1239	No
149	ACBD6	1452601_a_at 1453199_at	19094	-1.855	-0.1179	No
150	SOAT1	1417695_a_at 1417696_at 1417697_at 1426818_at 1448068_at	19142	-1.898	-0.1133	No
151	TBX6	1449868_at	19258	-1.984	-0.1116	No
152	ZCCHC8	1423755_at 1441639_at	19661	-2.248	-0.1221	No
153	YBX2	1420762_a_at	19728	-2.310	-0.1169	No
154	IL4I1	1419192_at	19954	-2.535	-0.1183	No
155	SLC25A14	1417154_at	20197	-2.795	-0.1195	No
156	ZBTB4	1429722_at 1460488_at	20319	-2.930	-0.1147	No
157	MXD3	1422970_at 1438847_at 1448878_at	20338	-2.963	-0.1050	No
158	ALDH6A1	1448104_at	20363	-2.992	-0.0955	No
159	STK35	1431107_at 1439802_at	20364	-2.993	-0.0849	No
160	MAZ	1427099_at	20396	-3.020	-0.0756	No
161	PHC1	1423212_at	20522	-3.189	-0.0701	No
162	H2AFZ	1441370_at	21157	-4.282	-0.0840	No
163	E2F7	1437187_at	21335	-4.748	-0.0754	No
164	USP52	1426700_a_at	21560	-5.702	-0.0654	No
165	SLCO3A1	1418030_at 1434537_at 1448918_at	21613	-5.996	-0.0466	No
166	DCK	1428838_a_at 1439012_a_at 1449176_a_at	21820	-8.499	-0.0259	No
167	ID3	1416630_at	21834	-8.786	0.0046	No